RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CNBD1Q8NA66 436 aa21.69■■□□□ 1.06
SREBF1-219ENST00000580540 NIP7Q9Y221 180 aaKnown RBP eCLIP21.69■■□□□ 1.06
SREBF1-219ENST00000580540 H0YIN7 160 aa21.68■■□□□ 1.06
SREBF1-219ENST00000580540 HLFQ16534 295 aa21.68■■□□□ 1.06
SREBF1-219ENST00000580540 TTLL7Q6ZT98 887 aa21.68■■□□□ 1.06
SREBF1-219ENST00000580540 NBPF5PQ86XG9 351 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-219ENST00000580540 ST5P78524 1137 aa21.67■■□□□ 1.06
SREBF1-219ENST00000580540 CFAP44Q96MT7 982 aa21.67■■□□□ 1.06
SREBF1-219ENST00000580540 BCORQ6W2J9 1755 aa21.66■■□□□ 1.06
SREBF1-219ENST00000580540 NRXN2Q9P2S2 1712 aa21.66■■□□□ 1.06
SREBF1-219ENST00000580540 ERBB4Q15303 1308 aa21.66■■□□□ 1.06
SREBF1-219ENST00000580540 ANXA1P04083 346 aa21.66■■□□□ 1.06
SREBF1-219ENST00000580540 ZBTB3Q9H5J0 574 aa21.66■■□□□ 1.06
SREBF1-219ENST00000580540 MAP3K15Q6ZN16 1313 aa21.65■■□□□ 1.06
SREBF1-219ENST00000580540 PDE6BP35913 854 aa21.65■■□□□ 1.06
SREBF1-219ENST00000580540 CALD1Q05682 793 aaKnown RBP21.65■■□□□ 1.06
SREBF1-219ENST00000580540 ZNF622Q969S3 477 aaKnown RBP eCLIP21.65■■□□□ 1.062e-11■■■□□ 17.1
SREBF1-219ENST00000580540 BRIP1Q9BX63 1249 aa21.65■■□□□ 1.06
SREBF1-219ENST00000580540 PROSER3Q2NL68 480 aa21.64■■□□□ 1.05
SREBF1-219ENST00000580540 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
SREBF1-219ENST00000580540 ERVV-1B6SEH8 477 aa21.63■■□□□ 1.05
SREBF1-219ENST00000580540 GNAI1P63096 354 aa21.63■■□□□ 1.05
SREBF1-219ENST00000580540 TTLL6Q8N841 843 aa21.63■■□□□ 1.05
SREBF1-219ENST00000580540 BRCA1P38398 1863 aaKnown RBP21.62■■□□□ 1.05
SREBF1-219ENST00000580540 RGL2O15211 777 aa21.62■■□□□ 1.05
SREBF1-219ENST00000580540 GTF2E1P29083 439 aaPredicted RBP21.62■■□□□ 1.05
SREBF1-219ENST00000580540 AIMP1Q12904 312 aaKnown RBP21.62■■□□□ 1.05
SREBF1-219ENST00000580540 PDIA6Q15084 440 aa21.62■■□□□ 1.05
SREBF1-219ENST00000580540 TPTE2Q6XPS3 522 aa21.62■■□□□ 1.05
SREBF1-219ENST00000580540 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
SREBF1-219ENST00000580540 GPTP24298 496 aa21.61■■□□□ 1.05
SREBF1-219ENST00000580540 HDGFL1Q5TGJ6 251 aa21.61■■□□□ 1.05
SREBF1-219ENST00000580540 DUSP27Q5VZP5 1158 aa21.61■■□□□ 1.05
SREBF1-219ENST00000580540 PDZRN3Q9UPQ7 1066 aa21.61■■□□□ 1.05
SREBF1-219ENST00000580540 ZNF853P0CG23 659 aa21.6■■□□□ 1.05
SREBF1-219ENST00000580540 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-219ENST00000580540 ZNF219Q9P2Y4 722 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-219ENST00000580540 SALL2Q9Y467 1007 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-219ENST00000580540 ELL2O00472 640 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-219ENST00000580540 COPS6Q7L5N1 327 aa21.59■■□□□ 1.05
SREBF1-219ENST00000580540 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
SREBF1-219ENST00000580540 XAGE3Q8WTP9 111 aa21.59■■□□□ 1.05
SREBF1-219ENST00000580540 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
SREBF1-219ENST00000580540 CHPF2Q9P2E5 772 aa21.59■■□□□ 1.05
SREBF1-219ENST00000580540 ANKRD31Q8N7Z5 1873 aa21.58■■□□□ 1.05
SREBF1-219ENST00000580540 LRP10Q7Z4F1 713 aa21.58■■□□□ 1.05
SREBF1-219ENST00000580540 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
SREBF1-219ENST00000580540 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
SREBF1-219ENST00000580540 HOXB7P09629 217 aa21.57■■□□□ 1.04
SREBF1-219ENST00000580540 GIGYF2Q6Y7W6 1299 aaKnown RBP21.57■■□□□ 1.04
SREBF1-219ENST00000580540 NYXQ9GZU5 481 aa21.57■■□□□ 1.04
SREBF1-219ENST00000580540 NUP98P52948 1817 aa21.57■■□□□ 1.04
SREBF1-219ENST00000580540 NUTM1Q86Y26 1132 aa21.56■■□□□ 1.04
SREBF1-219ENST00000580540 SRGNP10124 158 aa21.55■■□□□ 1.04
SREBF1-219ENST00000580540 C9orf131Q5VYM1 1079 aa21.55■■□□□ 1.04
SREBF1-219ENST00000580540 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
SREBF1-219ENST00000580540 MASTLQ96GX5 879 aa21.55■■□□□ 1.04
SREBF1-219ENST00000580540 C21orf2O43822 256 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 ERFEQ4G0M1 354 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 SUSD4Q5VX71 490 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 STYK1Q6J9G0 422 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 ZNF34Q8IZ26 560 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
SREBF1-219ENST00000580540 CNKSR1Q969H4 720 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 GPBP1L1Q9HC44 474 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-219ENST00000580540 DBF4Q9UBU7 674 aaPredicted RBP21.54■■□□□ 1.04
SREBF1-219ENST00000580540 UBN2Q6ZU65 1347 aa21.54■■□□□ 1.04
SREBF1-219ENST00000580540 DLEC1Q9Y238 1755 aa21.53■■□□□ 1.04
SREBF1-219ENST00000580540 RASSF7Q02833 373 aa21.53■■□□□ 1.04
SREBF1-219ENST00000580540 CCDC27Q2M243 656 aa21.53■■□□□ 1.04
SREBF1-219ENST00000580540 C8orf58Q8NAV2 365 aa21.53■■□□□ 1.04
SREBF1-219ENST00000580540 RNF181Q9P0P0 153 aa21.53■■□□□ 1.04
SREBF1-219ENST00000580540 ADCY9O60503 1353 aa21.52■■□□□ 1.04
SREBF1-219ENST00000580540 PPP1R42Q7Z4L9 355 aa21.52■■□□□ 1.04
SREBF1-219ENST00000580540 COL11A2P13942 1736 aaPredicted RBP21.52■■□□□ 1.03
SREBF1-219ENST00000580540 NPR1P16066 1061 aa21.51■■□□□ 1.03
SREBF1-219ENST00000580540 PARP10Q53GL7 1025 aa21.51■■□□□ 1.03
SREBF1-219ENST00000580540 HSP90AB3PQ58FF7 597 aa21.51■■□□□ 1.03
SREBF1-219ENST00000580540 HYPKQ9NX55 129 aa21.51■■□□□ 1.03
SREBF1-219ENST00000580540 PRPF40BQ6NWY9 871 aaKnown RBP21.5■■□□□ 1.03
SREBF1-219ENST00000580540 UTP14AQ9BVJ6 771 aaKnown RBP21.5■■□□□ 1.03
SREBF1-219ENST00000580540 ABCC12Q96J65 1359 aa21.49■■□□□ 1.03
SREBF1-219ENST00000580540 TCIRG1Q13488 830 aa21.49■■□□□ 1.03
SREBF1-219ENST00000580540 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
SREBF1-219ENST00000580540 ZNF428Q96B54 188 aa21.49■■□□□ 1.03
SREBF1-219ENST00000580540 KLRG2A4D1S0 409 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-219ENST00000580540 NTSR2O95665 410 aa21.48■■□□□ 1.03
SREBF1-219ENST00000580540 TSPYL6Q8N831 410 aa21.48■■□□□ 1.03
SREBF1-219ENST00000580540 PLBD2Q8NHP8 589 aa21.47■■□□□ 1.03
SREBF1-219ENST00000580540 RPGRQ92834 1020 aaKnown RBP21.47■■□□□ 1.03
SREBF1-219ENST00000580540 SLX4Q8IY92 1834 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 CACNA1SQ13698 1873 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 NFKBIEO00221 500 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 LMNB1P20700 586 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 NCBP3Q53F19 620 aaKnown RBP21.46■■□□□ 1.03
SREBF1-219ENST00000580540 CCDC30Q5VVM6 783 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 NLRP10Q86W26 655 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 PHAXQ9H814 394 aaKnown RBP21.46■■□□□ 1.03
SREBF1-219ENST00000580540 IL16Q14005 1332 aa21.46■■□□□ 1.03
SREBF1-219ENST00000580540 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms