RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 TPTE2Q6XPS3 522 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 CNKSR1Q969H4 720 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
ERBB2-210ENST00000580074 NYXQ9GZU5 481 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 RNF181Q9P0P0 153 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 NIP7Q9Y221 180 aaKnown RBP eCLIP15.28■□□□□ 0.04
ERBB2-210ENST00000580074 ANKRD31Q8N7Z5 1873 aa15.28■□□□□ 0.04
ERBB2-210ENST00000580074 ERVV-1B6SEH8 477 aa15.27■□□□□ 0.04
ERBB2-210ENST00000580074 PIP4K2AP48426 406 aaPredicted RBP15.27■□□□□ 0.04
ERBB2-210ENST00000580074 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.04
ERBB2-210ENST00000580074 STYK1Q6J9G0 422 aa15.27■□□□□ 0.04
ERBB2-210ENST00000580074 THUMPD2Q9BTF0 503 aaKnown RBP15.27■□□□□ 0.04
ERBB2-210ENST00000580074 ARFGEF2Q9Y6D5 1785 aa15.26■□□□□ 0.03
ERBB2-210ENST00000580074 COL11A2P13942 1736 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-210ENST00000580074 NBPF26B4DH59 902 aa15.26■□□□□ 0.03
ERBB2-210ENST00000580074 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
ERBB2-210ENST00000580074 NBPF10Q6P3W6 841 aaKnown RBP15.26■□□□□ 0.03
ERBB2-210ENST00000580074 C16orf71Q8IYS4 520 aaPredicted RBP15.26■□□□□ 0.03
ERBB2-210ENST00000580074 NBPF15Q8N660 670 aa15.26■□□□□ 0.03
ERBB2-210ENST00000580074 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
ERBB2-210ENST00000580074 IBTKQ9P2D0 1353 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-210ENST00000580074 MAP3K15Q6ZN16 1313 aa15.25■□□□□ 0.03
ERBB2-210ENST00000580074 LMNB1P20700 586 aa15.25■□□□□ 0.03
ERBB2-210ENST00000580074 MASTLQ96GX5 879 aa15.25■□□□□ 0.03
ERBB2-210ENST00000580074 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
ERBB2-210ENST00000580074 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
ERBB2-210ENST00000580074 CCDC146Q8IYE0 955 aa15.24■□□□□ 0.03
ERBB2-210ENST00000580074 SBF1O95248 1867 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 CHL1O00533 1208 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 MYL6BP14649 208 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 NPR1P16066 1061 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 NGEFQ8N5V2 710 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 TRIM35Q9UPQ4 493 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
ERBB2-210ENST00000580074 NUP98P52948 1817 aa15.22■□□□□ 0.03
ERBB2-210ENST00000580074 HOXB7P09629 217 aa15.22■□□□□ 0.03
ERBB2-210ENST00000580074 SRGNP10124 158 aa15.22■□□□□ 0.03
ERBB2-210ENST00000580074 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
ERBB2-210ENST00000580074 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
ERBB2-210ENST00000580074 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
ERBB2-210ENST00000580074 RIC1Q4ADV7 1423 aa15.21■□□□□ 0.03
ERBB2-210ENST00000580074 ANP32CO43423 234 aa15.21■□□□□ 0.03
ERBB2-210ENST00000580074 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.03
ERBB2-210ENST00000580074 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
ERBB2-210ENST00000580074 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
ERBB2-210ENST00000580074 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 TOMM70O94826 608 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 ALDH1B1P30837 517 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 RASSF7Q02833 373 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 CCDC93Q567U6 631 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 PRPF40BQ6NWY9 871 aaKnown RBP15.2■□□□□ 0.02
ERBB2-210ENST00000580074 GIGYF2Q6Y7W6 1299 aaKnown RBP15.2■□□□□ 0.02
ERBB2-210ENST00000580074 TAOK3Q9H2K8 898 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 ZBTB3Q9H5J0 574 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
ERBB2-210ENST00000580074 FAM177BA6PVY3 158 aa15.19■□□□□ 0.02
ERBB2-210ENST00000580074 KIF3CO14782 793 aa15.19■□□□□ 0.02
ERBB2-210ENST00000580074 C21orf2O43822 256 aa15.19■□□□□ 0.02
ERBB2-210ENST00000580074 DPY19L2Q6NUT2 758 aa15.19■□□□□ 0.02
ERBB2-210ENST00000580074 CCDC24Q8N4L8 307 aa15.19■□□□□ 0.02
ERBB2-210ENST00000580074 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
ERBB2-210ENST00000580074 UTRNP46939 3433 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 DICER1Q9UPY3 1922 aaKnown RBP15.18■□□□□ 0.02
ERBB2-210ENST00000580074 ZNF853P0CG23 659 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 HSPA6P17066 643 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 HLFQ16534 295 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 TMX4Q9H1E5 349 aaPredicted RBP15.18■□□□□ 0.02
ERBB2-210ENST00000580074 ANKRD36CQ5JPF3 1778 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 CCDC88AQ3V6T2 1871 aa15.18■□□□□ 0.02
ERBB2-210ENST00000580074 NFKBIEO00221 500 aa15.17■□□□□ 0.02
ERBB2-210ENST00000580074 GNAI1P63096 354 aa15.17■□□□□ 0.02
ERBB2-210ENST00000580074 GRIPAP1Q4V328 841 aa15.17■□□□□ 0.02
ERBB2-210ENST00000580074 TTLL7Q6ZT98 887 aa15.17■□□□□ 0.02
ERBB2-210ENST00000580074 RBM46Q8TBY0 533 aaKnown RBP15.17■□□□□ 0.02
ERBB2-210ENST00000580074 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
ERBB2-210ENST00000580074 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
ERBB2-210ENST00000580074 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
ERBB2-210ENST00000580074 SLX4Q8IY92 1834 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
ERBB2-210ENST00000580074 APAF1O14727 1248 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 GPTP24298 496 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 ERFEQ4G0M1 354 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 HDGFL1Q5TGJ6 251 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 CC2D2BQ6DHV5 1058 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 LRP10Q7Z4F1 713 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 RTKN2Q8IZC4 609 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 NMRK2Q9NPI5 230 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
ERBB2-210ENST00000580074 GLTPD2A6NH11 291 aa15.15■□□□□ 0.02
ERBB2-210ENST00000580074 FSTL1Q12841 308 aa15.15■□□□□ 0.02
ERBB2-210ENST00000580074 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
ERBB2-210ENST00000580074 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-210ENST00000580074 APLP1P51693 650 aa15.14■□□□□ 0.01
ERBB2-210ENST00000580074 PDIA6Q15084 440 aa15.14■□□□□ 0.01
ERBB2-210ENST00000580074 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
ERBB2-210ENST00000580074 ZNF34Q8IZ26 560 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms