RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 SETDB2Q96T68 719 aa24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 DBF4Q9UBU7 674 aaPredicted RBP24.2■■□□□ 1.46
NEK4P2-201ENST00000580004 SERPINB2P05120 415 aa24.19■■□□□ 1.46
NEK4P2-201ENST00000580004 PXDNLA1KZ92 1463 aa24.18■■□□□ 1.46
NEK4P2-201ENST00000580004 ATP10DQ9P241 1426 aa24.18■■□□□ 1.46
NEK4P2-201ENST00000580004 BRCA1P38398 1863 aaKnown RBP24.17■■□□□ 1.46
NEK4P2-201ENST00000580004 N4BP2Q86UW6 1770 aaPredicted RBP24.16■■□□□ 1.46
NEK4P2-201ENST00000580004 HYPKQ9NX55 129 aa24.16■■□□□ 1.46
NEK4P2-201ENST00000580004 BICDL1Q6ZP65 573 aa24.15■■□□□ 1.46
NEK4P2-201ENST00000580004 PDZRN3Q9UPQ7 1066 aa24.15■■□□□ 1.46
NEK4P2-201ENST00000580004 CACNA1FO60840 1977 aa24.14■■□□□ 1.46
NEK4P2-201ENST00000580004 ZNF521Q96K83 1311 aa24.14■■□□□ 1.46
NEK4P2-201ENST00000580004 DLEC1Q9Y238 1755 aa24.14■■□□□ 1.46
NEK4P2-201ENST00000580004 GPR162Q16538 588 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 GIGYF2Q6Y7W6 1299 aaKnown RBP24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 TTLL7Q6ZT98 887 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 C8orf58Q8NAV2 365 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 TSR2Q969E8 191 aaKnown RBP24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 MYH16Q9H6N6 1097 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 CHPF2Q9P2E5 772 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 CHD4Q14839 1912 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 ANKRD36CQ5JPF3 1778 aa24.14■■□□□ 1.45
NEK4P2-201ENST00000580004 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 GRIN3BO60391 1043 aa24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 HLFQ16534 295 aa24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 PROSER3Q2NL68 480 aa24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 NIP7Q9Y221 180 aaKnown RBP eCLIP24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 SALL2Q9Y467 1007 aaPredicted RBP24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 IBTKQ9P2D0 1353 aaPredicted RBP24.13■■□□□ 1.45
NEK4P2-201ENST00000580004 CCDC30Q5VVM6 783 aa24.12■■□□□ 1.45
NEK4P2-201ENST00000580004 CNBD1Q8NA66 436 aa24.12■■□□□ 1.45
NEK4P2-201ENST00000580004 NECTIN2Q92692 538 aa24.12■■□□□ 1.45
NEK4P2-201ENST00000580004 ANKRD31Q8N7Z5 1873 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 SENP3-EIF4A1A0A087X0R7 540 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 GOLGA2Q08379 1002 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 HSP90AB3PQ58FF7 597 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 PRR5LQ6MZQ0 368 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 COPS6Q7L5N1 327 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 MIER1Q8N108 512 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 BRIP1Q9BX63 1249 aa24.11■■□□□ 1.45
NEK4P2-201ENST00000580004 ST5P78524 1137 aa24.1■■□□□ 1.45
NEK4P2-201ENST00000580004 TPTE2Q6XPS3 522 aa24.1■■□□□ 1.45
NEK4P2-201ENST00000580004 NBPF5PQ86XG9 351 aaPredicted RBP24.1■■□□□ 1.45
NEK4P2-201ENST00000580004 XAGE3Q8WTP9 111 aa24.1■■□□□ 1.45
NEK4P2-201ENST00000580004 ZBTB3Q9H5J0 574 aa24.1■■□□□ 1.45
NEK4P2-201ENST00000580004 ARFGEF1Q9Y6D6 1849 aa24.1■■□□□ 1.45
NEK4P2-201ENST00000580004 ELL2O00472 640 aaPredicted RBP24.09■■□□□ 1.45
NEK4P2-201ENST00000580004 ANXA1P04083 346 aa24.09■■□□□ 1.45
NEK4P2-201ENST00000580004 PDE6BP35913 854 aa24.09■■□□□ 1.45
NEK4P2-201ENST00000580004 TWISTNBQ3B726 338 aaPredicted RBP24.09■■□□□ 1.45
NEK4P2-201ENST00000580004 NYXQ9GZU5 481 aa24.09■■□□□ 1.45
NEK4P2-201ENST00000580004 A0A0G2JLW4 131 aa24.08■■□□□ 1.45
NEK4P2-201ENST00000580004 NPHP1O15259 732 aa24.08■■□□□ 1.45
NEK4P2-201ENST00000580004 DPEP1P16444 411 aa24.08■■□□□ 1.45
NEK4P2-201ENST00000580004 PARP10Q53GL7 1025 aa24.08■■□□□ 1.45
NEK4P2-201ENST00000580004 ZNF34Q8IZ26 560 aa24.08■■□□□ 1.45
NEK4P2-201ENST00000580004 PIM2Q9P1W9 311 aa24.08■■□□□ 1.45
NEK4P2-201ENST00000580004 KCNA3P22001 575 aa24.07■■□□□ 1.44
NEK4P2-201ENST00000580004 TSPYL6Q8N831 410 aa24.07■■□□□ 1.44
NEK4P2-201ENST00000580004 PLBD2Q8NHP8 589 aa24.07■■□□□ 1.44
NEK4P2-201ENST00000580004 YBX3P16989 372 aaKnown RBP eCLIP24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 ANKRD13DQ6ZTN6 518 aa24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 PELP1Q8IZL8 1130 aaKnown RBP24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 STK31Q9BXU1 1019 aa24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 RIC1Q4ADV7 1423 aa24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 ARFGEF2Q9Y6D5 1785 aa24.06■■□□□ 1.44
NEK4P2-201ENST00000580004 AIMP1Q12904 312 aaKnown RBP24.05■■□□□ 1.44
NEK4P2-201ENST00000580004 E9PSI1 815 aa24.04■■□□□ 1.44
NEK4P2-201ENST00000580004 H0YIN7 160 aa24.04■■□□□ 1.44
NEK4P2-201ENST00000580004 SPINK5Q9NQ38 1064 aaPredicted RBP24.04■■□□□ 1.44
NEK4P2-201ENST00000580004 TCIRG1Q13488 830 aa24.03■■□□□ 1.44
NEK4P2-201ENST00000580004 PPP1R42Q7Z4L9 355 aa24.03■■□□□ 1.44
NEK4P2-201ENST00000580004 UBN2Q6ZU65 1347 aa24.03■■□□□ 1.44
NEK4P2-201ENST00000580004 COL11A2P13942 1736 aaPredicted RBP24.02■■□□□ 1.44
NEK4P2-201ENST00000580004 KLRG2A4D1S0 409 aaPredicted RBP24.02■■□□□ 1.44
NEK4P2-201ENST00000580004 DDX58O95786 925 aaKnown RBP24.02■■□□□ 1.44
NEK4P2-201ENST00000580004 EXOSC9Q06265 439 aaKnown RBP24.02■■□□□ 1.44
NEK4P2-201ENST00000580004 DALRD3Q5D0E6 543 aaKnown RBP24.02■■□□□ 1.44
NEK4P2-201ENST00000580004 VAMP4O75379 141 aa24.01■■□□□ 1.43
NEK4P2-201ENST00000580004 GTF2E1P29083 439 aaPredicted RBP24.01■■□□□ 1.43
NEK4P2-201ENST00000580004 CHRNA5P30532 468 aa24.01■■□□□ 1.43
NEK4P2-201ENST00000580004 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
NEK4P2-201ENST00000580004 GPTP24298 496 aa24■■□□□ 1.43
NEK4P2-201ENST00000580004 BCS1LQ9Y276 419 aa24■■□□□ 1.43
NEK4P2-201ENST00000580004 TRIM28Q13263 835 aaKnown RBP23.99■■□□□ 1.43
NEK4P2-201ENST00000580004 PHAXQ9H814 394 aaKnown RBP23.99■■□□□ 1.43
NEK4P2-201ENST00000580004 NTSR2O95665 410 aa23.98■■□□□ 1.43
NEK4P2-201ENST00000580004 SUSD4Q5VX71 490 aa23.98■■□□□ 1.43
NEK4P2-201ENST00000580004 STYK1Q6J9G0 422 aa23.98■■□□□ 1.43
NEK4P2-201ENST00000580004 TTLL6Q8N841 843 aa23.98■■□□□ 1.43
NEK4P2-201ENST00000580004 SRGNP10124 158 aa23.97■■□□□ 1.43
NEK4P2-201ENST00000580004 SLFN5Q08AF3 891 aa23.97■■□□□ 1.43
NEK4P2-201ENST00000580004 RIC3Q7Z5B4 369 aa23.97■■□□□ 1.43
NEK4P2-201ENST00000580004 NLRP10Q86W26 655 aa23.97■■□□□ 1.43
NEK4P2-201ENST00000580004 MASTLQ96GX5 879 aa23.97■■□□□ 1.43
NEK4P2-201ENST00000580004 UTP14AQ9BVJ6 771 aaKnown RBP23.97■■□□□ 1.43
NEK4P2-201ENST00000580004 SLC4A2P04920 1241 aa23.96■■□□□ 1.43
NEK4P2-201ENST00000580004 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
NEK4P2-201ENST00000580004 FAM177BA6PVY3 158 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms