RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-213	ENST00000579609	PTMS	P20962	102 aa		10.89	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ZC3H6	P61129	1189 aa	Known RBP	10.89	□□□□□ -0.67
PPP4R1-213	ENST00000579609	NFKBIB	Q15653	356 aa		10.89	□□□□□ -0.67
PPP4R1-213	ENST00000579609	KIF1BP	Q96EK5	621 aa		10.89	□□□□□ -0.67
PPP4R1-213	ENST00000579609	SLAIN2	Q9P270	581 aa		10.89	□□□□□ -0.67
PPP4R1-213	ENST00000579609	TTC41P	Q6P2S7	1318 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ARFGEF2	Q9Y6D5	1785 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ZBTB7C	A1YPR0	619 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PI4KAP2	A4QPH2	592 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	SNRPA1	P09661	255 aa	Known RBP	10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	SDS	P20132	328 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	MX1	P20591	662 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ANAPC15	P60006	121 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	LARP1	Q6PKG0	1096 aa	Known RBP	10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	TICAM2	Q86XR7	235 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PI4KAP1	Q8N8J0	262 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ZFP91	Q96JP5	570 aa	Predicted RBP	10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	FMNL2	Q96PY5	1086 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	CARD10	Q9BWT7	1032 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PHAX	Q9H814	394 aa	Known RBP	10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	CHMP5	Q9NZZ3	219 aa		10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	LRRFIP2	Q9Y608	721 aa	Known RBP	10.88	□□□□□ -0.67
PPP4R1-213	ENST00000579609	WNK3	Q9BYP7	1800 aa		10.87	□□□□□ -0.67
PPP4R1-213	ENST00000579609	ERC2	O15083	957 aa		10.87	□□□□□ -0.67
PPP4R1-213	ENST00000579609	CSB-PGBD3	P0DP91	1061 aa		10.87	□□□□□ -0.67
PPP4R1-213	ENST00000579609	FXR2	P51116	673 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
PPP4R1-213	ENST00000579609	TTC5	Q8N0Z6	440 aa		10.87	□□□□□ -0.67
PPP4R1-213	ENST00000579609	NUP188	Q5SRE5	1749 aa		10.87	□□□□□ -0.67
PPP4R1-213	ENST00000579609	TNS2	Q63HR2	1409 aa		10.86	□□□□□ -0.67
PPP4R1-213	ENST00000579609	EIF2S2	P20042	333 aa	Known RBP	10.86	□□□□□ -0.67
PPP4R1-213	ENST00000579609	NEXN	Q0ZGT2	675 aa		10.86	□□□□□ -0.67
PPP4R1-213	ENST00000579609	USP26	Q9BXU7	913 aa		10.86	□□□□□ -0.67
PPP4R1-213	ENST00000579609	AFDN	P55196	1824 aa	Known RBP	10.86	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PNMA6E	A0A0J9YXQ4	647 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	CYP27B1	O15528	508 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	DDIT3	P35638	169 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	MCM2	P49736	904 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	HSPA2	P54652	639 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	NBR1	Q14596	966 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PDIA6	Q15084	440 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PPP1R42	Q7Z4L9	355 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	RHPN1	Q8TCX5	695 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	KIF2C	Q99661	725 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	PRDM11	Q9NQV5	511 aa		10.85	□□□□□ -0.67
PPP4R1-213	ENST00000579609	CIC	Q96RK0	1608 aa	Predicted RBP	10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609		K7ELQ4	463 aa	Predicted RBP	10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	GRM8	O00222	908 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	SOCS7	O14512	581 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	KCNQ3	O43525	872 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	GTPBP6	O43824	516 aa	Predicted RBP	10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	MCC	P23508	829 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	GPATCH3	Q96I76	525 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	SGIP1	Q9BQI5	828 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	MAP3K2	Q9Y2U5	619 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	STK24	Q9Y6E0	443 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	KCP	Q6ZWJ8	1503 aa		10.84	□□□□□ -0.67
PPP4R1-213	ENST00000579609	SRGAP3	O43295	1099 aa		10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ST18	O60284	1047 aa		10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	IL2RB	P14784	551 aa		10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ZCRB1	Q8TBF4	217 aa	Known RBP	10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	METTL22	Q9BUU2	404 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	EXOC6B	Q9Y2D4	811 aa		10.83	□□□□□ -0.68
PPP4R1-213	ENST00000579609	RFX7	Q2KHR2	1363 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	SURF6	O75683	361 aa	Known RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	GLRX3	O76003	335 aa	Known RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	SLC4A3	P48751	1232 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CABP4	P57796	275 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CLEC17A	Q6ZS10	378 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ILDR2	Q71H61	639 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	LRP10	Q7Z4F1	713 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CLASRP	Q8N2M8	674 aa	Known RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	NFATC2IP	Q8NCF5	419 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	NECTIN2	Q92692	538 aa		10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CWC22	Q9HCG8	908 aa	Known RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.82	□□□□□ -0.68
PPP4R1-213	ENST00000579609	DDX11L8	A8MPP1	907 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	HIP1	O00291	1037 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	SMARCA5	O60264	1052 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CNTROB	Q8N137	903 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	PLBD2	Q8NHP8	589 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CERK	Q8TCT0	537 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ZNF496	Q96IT1	587 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ESYT1	Q9BSJ8	1104 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	DISP2	A7MBM2	1401 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	TOGARAM1	Q9Y4F4	1720 aa		10.81	□□□□□ -0.68
PPP4R1-213	ENST00000579609	ROBO1	Q9Y6N7	1651 aa		10.8	□□□□□ -0.68
PPP4R1-213	ENST00000579609	SPEF2	Q9C093	1822 aa		10.8	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CHML	P26374	656 aa		10.8	□□□□□ -0.68
PPP4R1-213	ENST00000579609	DEK	P35659	375 aa	Known RBP	10.8	□□□□□ -0.68
PPP4R1-213	ENST00000579609	GCKR	Q14397	625 aa		10.8	□□□□□ -0.68
PPP4R1-213	ENST00000579609	RABL6	Q3YEC7	729 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP4R1-213	ENST00000579609	CHRDL2	Q6WN34	429 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms