RNA–Protein interactions for RNA: ENST00000579146.5

PGAP3-206, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-206ENST00000579146 BICC1Q9H694 974 aaKnown RBP23.19■■□□□ 1.3
PGAP3-206ENST00000579146 PRDM11Q9NQV5 511 aa23.19■■□□□ 1.3
PGAP3-206ENST00000579146 NEURL1BA8MQ27 555 aa23.18■■□□□ 1.3
PGAP3-206ENST00000579146 EPB41L2O43491 1005 aaKnown RBP23.18■■□□□ 1.3
PGAP3-206ENST00000579146 CABP4P57796 275 aa23.18■■□□□ 1.3
PGAP3-206ENST00000579146 NEXNQ0ZGT2 675 aa23.18■■□□□ 1.3
PGAP3-206ENST00000579146 SLAIN2Q9P270 581 aa23.18■■□□□ 1.3
PGAP3-206ENST00000579146 PALD1Q9ULE6 856 aa23.18■■□□□ 1.3
PGAP3-206ENST00000579146 IL17RAQ96F46 866 aa23.18■■□□□ 1.3
PGAP3-206ENST00000579146 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
PGAP3-206ENST00000579146 SSFA2P28290 1259 aa23.17■■□□□ 1.3
PGAP3-206ENST00000579146 CNTROBQ8N137 903 aa23.17■■□□□ 1.3
PGAP3-206ENST00000579146 GLI3P10071 1580 aa23.17■■□□□ 1.3
PGAP3-206ENST00000579146 GLRX3O76003 335 aaKnown RBP23.16■■□□□ 1.3
PGAP3-206ENST00000579146 NEK4P51957 841 aa23.16■■□□□ 1.3
PGAP3-206ENST00000579146 GCKRQ14397 625 aa23.16■■□□□ 1.3
PGAP3-206ENST00000579146 CLEC17AQ6ZS10 378 aa23.16■■□□□ 1.3
PGAP3-206ENST00000579146 ANKRD13DQ6ZTN6 518 aa23.16■■□□□ 1.3
PGAP3-206ENST00000579146 MYD88Q99836 296 aa23.16■■□□□ 1.3
PGAP3-206ENST00000579146 ZNF335Q9H4Z2 1342 aaPredicted RBP23.15■■□□□ 1.3
PGAP3-206ENST00000579146 COL5A2P05997 1499 aaPredicted RBP23.15■■□□□ 1.3
PGAP3-206ENST00000579146 TOM1L2Q6ZVM7 507 aa23.15■■□□□ 1.3
PGAP3-206ENST00000579146 LAMB4A4D0S4 1761 aa23.15■■□□□ 1.3
PGAP3-206ENST00000579146 CWC22Q9HCG8 908 aaKnown RBP23.14■■□□□ 1.3
PGAP3-206ENST00000579146 PCDH11XQ9BZA7 1347 aa23.14■■□□□ 1.3
PGAP3-206ENST00000579146 PCDH11YQ9BZA8 1340 aa23.14■■□□□ 1.3
PGAP3-206ENST00000579146 SGSM2O43147 1006 aa23.14■■□□□ 1.29
PGAP3-206ENST00000579146 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
PGAP3-206ENST00000579146 ECHDC1Q9NTX5 307 aa23.14■■□□□ 1.29
PGAP3-206ENST00000579146 ZCRB1Q8TBF4 217 aaKnown RBP23.13■■□□□ 1.29
PGAP3-206ENST00000579146 ABCA3Q99758 1704 aa23.13■■□□□ 1.29
PGAP3-206ENST00000579146 SASH1O94885 1247 aa23.13■■□□□ 1.29
PGAP3-206ENST00000579146 NUCB2P80303 420 aa23.13■■□□□ 1.29
PGAP3-206ENST00000579146 GZF1Q9H116 711 aaPredicted RBP23.13■■□□□ 1.29
PGAP3-206ENST00000579146 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
PGAP3-206ENST00000579146 IFIT2P09913 472 aaKnown RBP23.12■■□□□ 1.29
PGAP3-206ENST00000579146 HSPA4P34932 840 aa23.12■■□□□ 1.29
PGAP3-206ENST00000579146 MCM2P49736 904 aa23.12■■□□□ 1.29
PGAP3-206ENST00000579146 G3BP1Q13283 466 aaKnown RBP eCLIP23.12■■□□□ 1.29
PGAP3-206ENST00000579146 ZGPATQ8N5A5 531 aaKnown RBP23.12■■□□□ 1.29
PGAP3-206ENST00000579146 GPATCH3Q96I76 525 aa23.12■■□□□ 1.29
PGAP3-206ENST00000579146 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
PGAP3-206ENST00000579146 ARFGEF2Q9Y6D5 1785 aa23.11■■□□□ 1.29
PGAP3-206ENST00000579146 PTMSP20962 102 aa23.11■■□□□ 1.29
PGAP3-206ENST00000579146 AACSQ86V21 672 aa23.11■■□□□ 1.29
PGAP3-206ENST00000579146 RAD50Q92878 1312 aa23.1■■□□□ 1.29
PGAP3-206ENST00000579146 AFDNP55196 1824 aaKnown RBP23.1■■□□□ 1.29
PGAP3-206ENST00000579146 EPHA10Q5JZY3 1008 aa23.1■■□□□ 1.29
PGAP3-206ENST00000579146 TMX3Q96JJ7 454 aa23.1■■□□□ 1.29
PGAP3-206ENST00000579146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.1■■□□□ 1.29
PGAP3-206ENST00000579146 UBR2Q8IWV8 1755 aa23.09■■□□□ 1.29
PGAP3-206ENST00000579146 KDM4FA0A1W2PPD8 638 aa23.09■■□□□ 1.29
PGAP3-206ENST00000579146 ERVV-2B6SEH9 535 aa23.09■■□□□ 1.29
PGAP3-206ENST00000579146 EAF2Q96CJ1 260 aaPredicted RBP23.09■■□□□ 1.29
PGAP3-206ENST00000579146 CARD10Q9BWT7 1032 aa23.09■■□□□ 1.29
PGAP3-206ENST00000579146 LSG1Q9H089 658 aaKnown RBP23.09■■□□□ 1.29
PGAP3-206ENST00000579146 BAG4O95429 457 aaKnown RBP23.08■■□□□ 1.29
PGAP3-206ENST00000579146 L1TD1Q5T7N2 865 aaKnown RBP23.08■■□□□ 1.29
PGAP3-206ENST00000579146 FSD2A1L4K1 749 aa23.08■■□□□ 1.28
PGAP3-206ENST00000579146 PKP1Q13835 747 aa23.08■■□□□ 1.28
PGAP3-206ENST00000579146 NKX1-1Q15270 411 aaPredicted RBP23.08■■□□□ 1.28
PGAP3-206ENST00000579146 SKOR2Q2VWA4 1001 aaPredicted RBP23.08■■□□□ 1.28
PGAP3-206ENST00000579146 CWC27Q6UX04 472 aaKnown RBP23.08■■□□□ 1.28
PGAP3-206ENST00000579146 ERBB4Q15303 1308 aa23.07■■□□□ 1.28
PGAP3-206ENST00000579146 IL2RBP14784 551 aa23.07■■□□□ 1.28
PGAP3-206ENST00000579146 IL27Q8NEV9 243 aa23.07■■□□□ 1.28
PGAP3-206ENST00000579146 SIL1Q9H173 461 aa23.07■■□□□ 1.28
PGAP3-206ENST00000579146 SHANK3Q9BYB0 1731 aa23.07■■□□□ 1.28
PGAP3-206ENST00000579146 PLBD2Q8NHP8 589 aa23.06■■□□□ 1.28
PGAP3-206ENST00000579146 KLHDC4Q8TBB5 520 aa23.06■■□□□ 1.28
PGAP3-206ENST00000579146 COL15A1P39059 1388 aa23.06■■□□□ 1.28
PGAP3-206ENST00000579146 DIAPH3Q9NSV4 1193 aa23.06■■□□□ 1.28
PGAP3-206ENST00000579146 NBPF26B4DH59 902 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 GOLGA6L22H0YM25 854 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 CUL4AQ13619 759 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 NBPF14Q5TI25 921 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 NBPF10Q6P3W6 841 aaKnown RBP23.05■■□□□ 1.28
PGAP3-206ENST00000579146 NBPF15Q8N660 670 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 EVI5LQ96CN4 794 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 UPF3BQ9BZI7 483 aaKnown RBP23.05■■□□□ 1.28
PGAP3-206ENST00000579146 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 GOLGA6L3A6NEY3 463 aa23.05■■□□□ 1.28
PGAP3-206ENST00000579146 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
PGAP3-206ENST00000579146 RABL6Q3YEC7 729 aaPredicted RBP23.04■■□□□ 1.28
PGAP3-206ENST00000579146 KIAA1211Q6ZU35 1233 aa23.04■■□□□ 1.28
PGAP3-206ENST00000579146 UBE3BQ7Z3V4 1068 aa23.04■■□□□ 1.28
PGAP3-206ENST00000579146 CCDC8Q9H0W5 538 aaPredicted RBP23.04■■□□□ 1.28
PGAP3-206ENST00000579146 COPRSQ9NQ92 184 aa23.04■■□□□ 1.28
PGAP3-206ENST00000579146 ATP5J2-PTCD1G3V325 749 aa23.04■■□□□ 1.28
PGAP3-206ENST00000579146 PTCD1O75127 700 aaKnown RBP23.04■■□□□ 1.28
PGAP3-206ENST00000579146 RUFY2Q8WXA3 655 aa23.04■■□□□ 1.28
PGAP3-206ENST00000579146 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
PGAP3-206ENST00000579146 TLR7Q9NYK1 1049 aaKnown RBP23.04■■□□□ 1.28
PGAP3-206ENST00000579146 NHSL1Q5SYE7 1610 aa23.03■■□□□ 1.28
PGAP3-206ENST00000579146 RFX5P48382 616 aaPredicted RBP23.03■■□□□ 1.28
PGAP3-206ENST00000579146 STRN4Q9NRL3 753 aa23.03■■□□□ 1.28
PGAP3-206ENST00000579146 ZDHHC9Q9Y397 364 aa23.03■■□□□ 1.28
PGAP3-206ENST00000579146 SNX14Q9Y5W7 946 aa23.03■■□□□ 1.28
PGAP3-206ENST00000579146 A0A087WZG4 1122 aa23.02■■□□□ 1.28
PGAP3-206ENST00000579146 DDX54Q8TDD1 881 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms