RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 HDAC1Q13547 482 aaPredicted RBP6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FTSJ3Q8IY81 847 aaKnown RBP6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ARHGAP45Q92619 1136 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TATDN2Q93075 761 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 RWDD1Q9H446 243 aaPredicted RBP6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 PNMA3Q9UL41 463 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 DDX19BQ9UMR2 479 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ZNF142P52746 1687 aaPredicted RBP6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FLT4P35916 1363 aa6.73□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FAM187AA6NFU0 413 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ELL2O00472 640 aaPredicted RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 IPO8O15397 1037 aaKnown RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TWISTNBQ3B726 338 aaPredicted RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SPRYD7Q5W111 196 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ITPRIPQ8IWB1 547 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 EYA1Q99502 592 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 RGPD8O14715 1765 aaPredicted RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MARF1Q9Y4F3 1742 aaKnown RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 NWD1Q149M9 1564 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ABCC4O15439 1325 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 USP54Q70EL1 1684 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 TESPA1A2RU30 521 aaPredicted RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ZBTB7BO15156 539 aaPredicted RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 FOXO3O43524 673 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ZPR1O75312 459 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 COPS2P61201 443 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MTHFSDQ2M296 383 aaKnown RBP6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 KRT24Q2M2I5 525 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ERICH6Q7L0X2 663 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 MCM10Q7L590 875 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 SMC5Q8IY18 1101 aa6.72□□□□□ -1.33
ERVFRD-3-201ENST00000578561 CHD2O14647 1828 aaKnown RBP6.71□□□□□ -1.33
ERVFRD-3-201ENST00000578561 DLG5Q8TDM6 1919 aa6.71□□□□□ -1.33
ERVFRD-3-201ENST00000578561 ADGRL3Q9HAR2 1447 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 HOXC9P31274 260 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 SLC4A3P48751 1232 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NUTM2GQ5VZR2 741 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 SLF2Q8IX21 1173 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 PRR14Q9BWN1 585 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 KIF24Q5T7B8 1368 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 KIAA0232Q92628 1395 aa6.71□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NPHP4O75161 1426 aaPredicted RBP6.7□□□□□ -1.34
ERVFRD-3-201ENST00000578561 AMPHP49418 695 aa6.7□□□□□ -1.34
ERVFRD-3-201ENST00000578561 INSM1Q01101 510 aaPredicted RBP6.7□□□□□ -1.34
ERVFRD-3-201ENST00000578561 RGS12O14924 1447 aa6.7□□□□□ -1.34
ERVFRD-3-201ENST00000578561 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
ERVFRD-3-201ENST00000578561 WFS1O76024 890 aa6.69□□□□□ -1.34
ERVFRD-3-201ENST00000578561 SIRT2Q8IXJ6 389 aa6.69□□□□□ -1.34
ERVFRD-3-201ENST00000578561 ABTB2Q8N961 1025 aa6.69□□□□□ -1.34
ERVFRD-3-201ENST00000578561 CDHR5Q9HBB8 845 aa6.69□□□□□ -1.34
ERVFRD-3-201ENST00000578561 ANKLE1Q8NAG6 615 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 FAM198AQ9UFP1 575 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NFAT5O94916 1531 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 RTL1A6NKG5 1358 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 MSH6P52701 1360 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NUCB1Q02818 461 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 ZNF697Q5TEC3 545 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 SMYD5Q6GMV2 418 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 IP6K1Q92551 441 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 API5Q9BZZ5 524 aaKnown RBP6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 AAASQ9NRG9 546 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 MIS18AQ9NYP9 233 aa6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 RBM27Q9P2N5 1060 aaKnown RBP6.68□□□□□ -1.34
ERVFRD-3-201ENST00000578561 HTATSF1O43719 755 aaKnown RBP6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 ESCO1Q5FWF5 840 aa6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 INTS3Q68E01 1043 aaKnown RBP6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 IL17REQ8NFR9 667 aa6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 GAS2L2Q8NHY3 880 aa6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 ORAI2Q96SN7 254 aa6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 C1orf115Q9H7X2 142 aa6.67□□□□□ -1.34
ERVFRD-3-201ENST00000578561 RBM26Q5T8P6 1007 aaKnown RBP6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NUDT18Q6ZVK8 323 aa6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 G2E3Q7L622 706 aa6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 EMID1Q96A84 441 aaPredicted RBP6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 LRRC37A3O60309 1634 aa6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 SETD1BQ9UPS6 1966 aaKnown RBP6.66□□□□□ -1.34
ERVFRD-3-201ENST00000578561 WIPF1O43516 503 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 GDF9O60383 454 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 PSME1Q06323 249 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 CHD1LQ86WJ1 897 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 RTF1Q92541 710 aaKnown RBP6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 LTV1Q96GA3 475 aaPredicted RBP6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 NPDC1Q9NQX5 325 aaPredicted RBP6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 TSPYL4Q9UJ04 414 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 PCDHB3Q9Y5E6 796 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 SLIT3O75094 1523 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 MAP3K5Q99683 1374 aa6.65□□□□□ -1.34
ERVFRD-3-201ENST00000578561 VIRMAQ69YN4 1812 aaKnown RBP6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 NCAPD2Q15021 1401 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ATP10DQ9P241 1426 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 GNAT3A8MTJ3 354 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 C3orf80F5H4A9 247 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LMOD2Q6P5Q4 547 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 C14orf37Q86TY3 774 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms