RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
COPS3-215ENST00000578317 DUSP27Q5VZP5 1158 aa10.4□□□□□ -0.74
COPS3-215ENST00000578317 CCDC102AQ96A19 550 aa10.4□□□□□ -0.74
COPS3-215ENST00000578317 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
COPS3-215ENST00000578317 TNS2Q63HR2 1409 aa10.4□□□□□ -0.75
COPS3-215ENST00000578317 IRF6O14896 467 aa10.4□□□□□ -0.75
COPS3-215ENST00000578317 GNPATO15228 680 aa10.4□□□□□ -0.75
COPS3-215ENST00000578317 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.75
COPS3-215ENST00000578317 RGPD2P0DJD1 1756 aa10.39□□□□□ -0.75
COPS3-215ENST00000578317 RXRBP28702 533 aa10.39□□□□□ -0.75
COPS3-215ENST00000578317 TEFQ10587 303 aa10.39□□□□□ -0.75
COPS3-215ENST00000578317 HIC1Q14526 733 aa10.39□□□□□ -0.75
COPS3-215ENST00000578317 SEPT12Q8IYM1 358 aa10.39□□□□□ -0.75
COPS3-215ENST00000578317 MARCH10Q8NA82 808 aaPredicted RBP10.39□□□□□ -0.75
COPS3-215ENST00000578317 SLC52A2Q9HAB3 445 aa10.39□□□□□ -0.75
COPS3-215ENST00000578317 NUDT7P0C024 238 aa10.38□□□□□ -0.75
COPS3-215ENST00000578317 AMHR2Q16671 573 aa10.38□□□□□ -0.75
COPS3-215ENST00000578317 FAM117AQ9C073 453 aa10.38□□□□□ -0.75
COPS3-215ENST00000578317 BCL9O00512 1426 aa10.38□□□□□ -0.75
COPS3-215ENST00000578317 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
COPS3-215ENST00000578317 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
COPS3-215ENST00000578317 NFATC2IPQ8NCF5 419 aa10.37□□□□□ -0.75
COPS3-215ENST00000578317 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
COPS3-215ENST00000578317 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
COPS3-215ENST00000578317 EP400Q96L91 3159 aa10.37□□□□□ -0.75
COPS3-215ENST00000578317 CABP4P57796 275 aa10.36□□□□□ -0.75
COPS3-215ENST00000578317 MBIPQ9NS73 344 aa10.36□□□□□ -0.75
COPS3-215ENST00000578317 FANCIQ9NVI1 1328 aa10.36□□□□□ -0.75
COPS3-215ENST00000578317 PKD1L3Q7Z443 1732 aa10.36□□□□□ -0.75
COPS3-215ENST00000578317 BTBD11A6QL63 1104 aa10.36□□□□□ -0.75
COPS3-215ENST00000578317 TSPYL4Q9UJ04 414 aa10.36□□□□□ -0.75
COPS3-215ENST00000578317 PARP4Q9UKK3 1724 aaKnown RBP10.35□□□□□ -0.75
COPS3-215ENST00000578317 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
COPS3-215ENST00000578317 ZNF428Q96B54 188 aa10.35□□□□□ -0.75
COPS3-215ENST00000578317 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
COPS3-215ENST00000578317 PCDHGA10Q9Y5H3 936 aa10.35□□□□□ -0.75
COPS3-215ENST00000578317 THSD7AQ9UPZ6 1657 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 A0A0G2JS52 829 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 RIMBP2O15034 1052 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 MYT1Q01538 1121 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 ZNF790Q6PG37 636 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
COPS3-215ENST00000578317 MIS18AQ9NYP9 233 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 RGS12O14924 1447 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 ADAMTS7Q9UKP4 1686 aa10.34□□□□□ -0.75
COPS3-215ENST00000578317 PHF14O94880 888 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 EIF4A1P60842 406 aaKnown RBP10.33□□□□□ -0.76
COPS3-215ENST00000578317 EXOSC9Q06265 439 aaKnown RBP10.33□□□□□ -0.76
COPS3-215ENST00000578317 KRT27Q7Z3Y8 459 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 PIGBQ92521 554 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 CHMP4AQ9BY43 222 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 TMOD3Q9NYL9 352 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 MRC1P22897 1456 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 FAM196AQ6ZSG2 479 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 ZMYND15Q9H091 742 aa10.33□□□□□ -0.76
COPS3-215ENST00000578317 HEG1Q9ULI3 1381 aa10.32□□□□□ -0.76
COPS3-215ENST00000578317 VAMP4O75379 141 aa10.32□□□□□ -0.76
COPS3-215ENST00000578317 HOXB7P09629 217 aa10.32□□□□□ -0.76
COPS3-215ENST00000578317 C8orf58Q8NAV2 365 aa10.32□□□□□ -0.76
COPS3-215ENST00000578317 LRRC37A3O60309 1634 aa10.31□□□□□ -0.76
COPS3-215ENST00000578317 SNPHO15079 494 aa10.31□□□□□ -0.76
COPS3-215ENST00000578317 KCNQ3O43525 872 aa10.31□□□□□ -0.76
COPS3-215ENST00000578317 FECHP22830 423 aa10.31□□□□□ -0.76
COPS3-215ENST00000578317 FOSBP53539 338 aa10.31□□□□□ -0.76
COPS3-215ENST00000578317 TWISTNBQ3B726 338 aaPredicted RBP10.31□□□□□ -0.76
COPS3-215ENST00000578317 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
COPS3-215ENST00000578317 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
COPS3-215ENST00000578317 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
COPS3-215ENST00000578317 PTGDRQ13258 359 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 ALDH1L2Q3SY69 923 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 TTC5Q8N0Z6 440 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 TSPYL6Q8N831 410 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 FMNL2Q96PY5 1086 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 ATG3Q9NT62 314 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 RCAN3Q9UKA8 241 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
COPS3-215ENST00000578317 KCNQ2O43526 872 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 RARSP54136 660 aaKnown RBP10.29□□□□□ -0.76
COPS3-215ENST00000578317 SLC39A6Q13433 755 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
COPS3-215ENST00000578317 ZNF496Q96IT1 587 aaPredicted RBP10.29□□□□□ -0.76
COPS3-215ENST00000578317 EPAS1Q99814 870 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 ASAP1Q9ULH1 1129 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 SHANK3Q9BYB0 1731 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 SNRPA1P09661 255 aaKnown RBP10.29□□□□□ -0.76
COPS3-215ENST00000578317 SMARCC1Q92922 1105 aaPredicted RBP10.29□□□□□ -0.76
COPS3-215ENST00000578317 SYTL4Q96C24 671 aaPredicted RBP10.29□□□□□ -0.76
COPS3-215ENST00000578317 ACSBG1Q96GR2 724 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 CDHR5Q9HBB8 845 aa10.29□□□□□ -0.76
COPS3-215ENST00000578317 DLG5Q8TDM6 1919 aa10.28□□□□□ -0.76
COPS3-215ENST00000578317 KRT24Q2M2I5 525 aa10.28□□□□□ -0.76
COPS3-215ENST00000578317 TEX13AQ9BXU3 409 aaPredicted RBP10.28□□□□□ -0.76
COPS3-215ENST00000578317 RNF123Q5XPI4 1314 aa10.28□□□□□ -0.76
COPS3-215ENST00000578317 ELL2O00472 640 aaPredicted RBP10.27□□□□□ -0.77
COPS3-215ENST00000578317 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms