RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 MAP3K15Q6ZN16 1313 aa14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 NPHP1O15259 732 aa14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 MYL6BP14649 208 aa14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 DALRD3Q5D0E6 543 aaKnown RBP14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 KIF6Q6ZMV9 814 aa14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
PPP4R1-208ENST00000578178 ERVV-1B6SEH8 477 aa14.25□□□□□ -0.13
PPP4R1-208ENST00000578178 EIF2S2P20042 333 aaKnown RBP14.25□□□□□ -0.13
PPP4R1-208ENST00000578178 ST5P78524 1137 aa14.25□□□□□ -0.13
PPP4R1-208ENST00000578178 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
PPP4R1-208ENST00000578178 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
PPP4R1-208ENST00000578178 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
PPP4R1-208ENST00000578178 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 HOXB7P09629 217 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 PDE6BP35913 854 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 HLFQ16534 295 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 KRT24Q2M2I5 525 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 TTLL7Q6ZT98 887 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 NBPF5PQ86XG9 351 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 PDZRN3Q9UPQ7 1066 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 ANKRD36CQ5JPF3 1778 aa14.24□□□□□ -0.13
PPP4R1-208ENST00000578178 CACNA1SQ13698 1873 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 H0YIN7 160 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 PDIA6Q15084 440 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 LRP10Q7Z4F1 713 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
PPP4R1-208ENST00000578178 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
PPP4R1-208ENST00000578178 GNAI1P63096 354 aa14.22□□□□□ -0.13
PPP4R1-208ENST00000578178 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
PPP4R1-208ENST00000578178 ARHGAP27Q6ZUM4 889 aa14.22□□□□□ -0.13
PPP4R1-208ENST00000578178 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
PPP4R1-208ENST00000578178 TNRC6CQ9HCJ0 1690 aaKnown RBP14.22□□□□□ -0.13
PPP4R1-208ENST00000578178 ANXA1P04083 346 aa14.21□□□□□ -0.13
PPP4R1-208ENST00000578178 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
PPP4R1-208ENST00000578178 HDGFL1Q5TGJ6 251 aa14.21□□□□□ -0.13
PPP4R1-208ENST00000578178 TTLL6Q8N841 843 aa14.21□□□□□ -0.13
PPP4R1-208ENST00000578178 NECTIN2Q92692 538 aa14.21□□□□□ -0.13
PPP4R1-208ENST00000578178 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 GIGYF2Q6Y7W6 1299 aaKnown RBP14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 NYXQ9GZU5 481 aa14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 DDX21Q9NR30 783 aaKnown RBP eCLIP14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 CHPF2Q9P2E5 772 aa14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 SBF1O95248 1867 aa14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 ABCC12Q96J65 1359 aa14.2□□□□□ -0.14
PPP4R1-208ENST00000578178 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
PPP4R1-208ENST00000578178 RIC1Q4ADV7 1423 aa14.19□□□□□ -0.14
PPP4R1-208ENST00000578178 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
PPP4R1-208ENST00000578178 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
PPP4R1-208ENST00000578178 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
PPP4R1-208ENST00000578178 ZNF622Q969S3 477 aaKnown RBP eCLIP14.19□□□□□ -0.143e-8■□□□□ 10.5
PPP4R1-208ENST00000578178 SLX4Q8IY92 1834 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 SRGNP10124 158 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 GPTP24298 496 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 STYK1Q6J9G0 422 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 XAGE3Q8WTP9 111 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 FER1L6Q2WGJ9 1857 aa14.18□□□□□ -0.14
PPP4R1-208ENST00000578178 GTF2E1P29083 439 aaPredicted RBP14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 AIMP1Q12904 312 aaKnown RBP14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 PARP10Q53GL7 1025 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 HSP90AB3PQ58FF7 597 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 COPS6Q7L5N1 327 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 ZNF34Q8IZ26 560 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 CNKSR1Q969H4 720 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 MASTLQ96GX5 879 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 DBF4Q9UBU7 674 aaPredicted RBP14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 TIAM2Q8IVF5 1701 aa14.17□□□□□ -0.14
PPP4R1-208ENST00000578178 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
PPP4R1-208ENST00000578178 KLRG2A4D1S0 409 aaPredicted RBP14.16□□□□□ -0.14
PPP4R1-208ENST00000578178 NTSR2O95665 410 aa14.16□□□□□ -0.14
PPP4R1-208ENST00000578178 NUTM1Q86Y26 1132 aa14.16□□□□□ -0.14
PPP4R1-208ENST00000578178 IL16Q14005 1332 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 NPR1P16066 1061 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 RASSF7Q02833 373 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 SUSD4Q5VX71 490 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 C9orf131Q5VYM1 1079 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 GPBP1L1Q9HC44 474 aaPredicted RBP14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 HYPKQ9NX55 129 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
PPP4R1-208ENST00000578178 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.15
PPP4R1-208ENST00000578178 CCDC88AQ3V6T2 1871 aa14.14□□□□□ -0.15
PPP4R1-208ENST00000578178 ERFEQ4G0M1 354 aa14.14□□□□□ -0.15
PPP4R1-208ENST00000578178 FAM9BQ8IZU0 186 aa14.14□□□□□ -0.15
PPP4R1-208ENST00000578178 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
PPP4R1-208ENST00000578178 ZNF526Q8TF50 670 aaPredicted RBP14.14□□□□□ -0.15
PPP4R1-208ENST00000578178 TSR2Q969E8 191 aaKnown RBP14.14□□□□□ -0.15
PPP4R1-208ENST00000578178 NFKBIEO00221 500 aa14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 ELL2O00472 640 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 C21orf2O43822 256 aa14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 CRY2Q49AN0 593 aa14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 SOGA3Q5TF21 947 aa14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 PLBD2Q8NHP8 589 aa14.13□□□□□ -0.15
PPP4R1-208ENST00000578178 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms