RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 RNF181Q9P0P0 153 aa12.94□□□□□ -0.34
TOM1L1-223ENST00000576932 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
TOM1L1-223ENST00000576932 TONSLQ96HA7 1378 aa12.94□□□□□ -0.34
TOM1L1-223ENST00000576932 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
TOM1L1-223ENST00000576932 DSG2Q14126 1118 aa12.93□□□□□ -0.34
TOM1L1-223ENST00000576932 TESK2Q96S53 571 aa12.93□□□□□ -0.34
TOM1L1-223ENST00000576932 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
TOM1L1-223ENST00000576932 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
TOM1L1-223ENST00000576932 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
TOM1L1-223ENST00000576932 SBF1O95248 1867 aa12.92□□□□□ -0.34
TOM1L1-223ENST00000576932 RFC4P35249 363 aa12.92□□□□□ -0.34
TOM1L1-223ENST00000576932 PLPP6Q8IY26 295 aa12.92□□□□□ -0.34
TOM1L1-223ENST00000576932 GGNBP2Q9H3C7 697 aa12.92□□□□□ -0.34
TOM1L1-223ENST00000576932 VEGFAP15692 232 aaPredicted RBP12.91□□□□□ -0.34
TOM1L1-223ENST00000576932 CAMK2BQ13554 666 aa12.91□□□□□ -0.34
TOM1L1-223ENST00000576932 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
TOM1L1-223ENST00000576932 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
TOM1L1-223ENST00000576932 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
TOM1L1-223ENST00000576932 PHKG2P15735 406 aa12.9□□□□□ -0.34
TOM1L1-223ENST00000576932 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
TOM1L1-223ENST00000576932 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
TOM1L1-223ENST00000576932 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
TOM1L1-223ENST00000576932 TBC1D12O60347 775 aa12.89□□□□□ -0.35
TOM1L1-223ENST00000576932 ERVV-2B6SEH9 535 aa12.88□□□□□ -0.35
TOM1L1-223ENST00000576932 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
TOM1L1-223ENST00000576932 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
TOM1L1-223ENST00000576932 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
TOM1L1-223ENST00000576932 ANKRD26Q9UPS8 1709 aa12.88□□□□□ -0.35
TOM1L1-223ENST00000576932 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
TOM1L1-223ENST00000576932 USP42Q9H9J4 1324 aaKnown RBP12.87□□□□□ -0.35
TOM1L1-223ENST00000576932 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
TOM1L1-223ENST00000576932 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
TOM1L1-223ENST00000576932 LMNB1P20700 586 aa12.86□□□□□ -0.35
TOM1L1-223ENST00000576932 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
TOM1L1-223ENST00000576932 MYH14Q7Z406 1995 aaKnown RBP12.86□□□□□ -0.35
TOM1L1-223ENST00000576932 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
TOM1L1-223ENST00000576932 DDR1Q08345 913 aa12.85□□□□□ -0.35
TOM1L1-223ENST00000576932 EYA1Q99502 592 aa12.85□□□□□ -0.35
TOM1L1-223ENST00000576932 EMILIN1Q9Y6C2 1016 aa12.85□□□□□ -0.35
TOM1L1-223ENST00000576932 CHRNA5P30532 468 aa12.84□□□□□ -0.35
TOM1L1-223ENST00000576932 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
TOM1L1-223ENST00000576932 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
TOM1L1-223ENST00000576932 TM4SF1P30408 202 aa12.83□□□□□ -0.36
TOM1L1-223ENST00000576932 RASSF7Q02833 373 aa12.83□□□□□ -0.36
TOM1L1-223ENST00000576932 PCDH10Q9P2E7 1040 aa12.83□□□□□ -0.36
TOM1L1-223ENST00000576932 TIAM2Q8IVF5 1701 aa12.82□□□□□ -0.36
TOM1L1-223ENST00000576932 POTECB2RU33 542 aa12.81□□□□□ -0.36
TOM1L1-223ENST00000576932 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
TOM1L1-223ENST00000576932 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
TOM1L1-223ENST00000576932 DLEC1Q9Y238 1755 aa12.81□□□□□ -0.36
TOM1L1-223ENST00000576932 ADAMTS7Q9UKP4 1686 aa12.8□□□□□ -0.36
TOM1L1-223ENST00000576932 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
TOM1L1-223ENST00000576932 FOXN1O15353 648 aa12.8□□□□□ -0.36
TOM1L1-223ENST00000576932 PPM1GO15355 546 aaPredicted RBP12.8□□□□□ -0.36
TOM1L1-223ENST00000576932 SRP68Q9UHB9 627 aaKnown RBP12.8□□□□□ -0.36
TOM1L1-223ENST00000576932 CNTNAP1P78357 1384 aa12.8□□□□□ -0.36
TOM1L1-223ENST00000576932 NRXN2Q9P2S2 1712 aa12.79□□□□□ -0.36
TOM1L1-223ENST00000576932 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
TOM1L1-223ENST00000576932 CABP4P57796 275 aa12.79□□□□□ -0.36
TOM1L1-223ENST00000576932 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
TOM1L1-223ENST00000576932 TTLL6Q8N841 843 aa12.79□□□□□ -0.36
TOM1L1-223ENST00000576932 SLAIN1Q8ND83 568 aa12.79□□□□□ -0.36
TOM1L1-223ENST00000576932 ZPR1O75312 459 aa12.78□□□□□ -0.36
TOM1L1-223ENST00000576932 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
TOM1L1-223ENST00000576932 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
TOM1L1-223ENST00000576932 NFKBIEO00221 500 aa12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 SNPHO15079 494 aa12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 AMOTQ4VCS5 1084 aa12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
TOM1L1-223ENST00000576932 TJP1Q07157 1748 aa12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 DICER1Q9UPY3 1922 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 DPYSL4O14531 572 aa12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 PTCD1O75127 700 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-223ENST00000576932 SOS1Q07889 1333 aaPredicted RBP12.75□□□□□ -0.37
TOM1L1-223ENST00000576932 NFIXQ14938 502 aa12.75□□□□□ -0.37
TOM1L1-223ENST00000576932 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
TOM1L1-223ENST00000576932 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
TOM1L1-223ENST00000576932 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
TOM1L1-223ENST00000576932 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
TOM1L1-223ENST00000576932 H0YIN7 160 aa12.74□□□□□ -0.37
TOM1L1-223ENST00000576932 MTHFSP49914 203 aa12.74□□□□□ -0.37
TOM1L1-223ENST00000576932 ZNF530Q6P9A1 599 aaPredicted RBP12.74□□□□□ -0.37
TOM1L1-223ENST00000576932 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
TOM1L1-223ENST00000576932 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
TOM1L1-223ENST00000576932 SERPINB2P05120 415 aa12.73□□□□□ -0.37
TOM1L1-223ENST00000576932 PDIA6Q15084 440 aa12.73□□□□□ -0.37
TOM1L1-223ENST00000576932 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
TOM1L1-223ENST00000576932 C1orf141Q5JVX7 400 aa12.73□□□□□ -0.37
TOM1L1-223ENST00000576932 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
TOM1L1-223ENST00000576932 NFATC2IPQ8NCF5 419 aa12.73□□□□□ -0.37
TOM1L1-223ENST00000576932 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
TOM1L1-223ENST00000576932 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms