RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 KCNQ3O43525 872 aa20.68■□□□□ 0.9
TOM1L1-221ENST00000575882 LETM1O95202 739 aaPredicted RBP20.68■□□□□ 0.9
TOM1L1-221ENST00000575882 SASS6Q6UVJ0 657 aa20.68■□□□□ 0.9
TOM1L1-221ENST00000575882 HYPKQ9NX55 129 aa20.68■□□□□ 0.9
TOM1L1-221ENST00000575882 ATP6V1DQ9Y5K8 247 aa20.68■□□□□ 0.9
TOM1L1-221ENST00000575882 RUFY2Q8WXA3 655 aa20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 MED1Q15648 1581 aaPredicted RBP20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 PLPPR3Q6T4P5 718 aa20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 MPNDQ8N594 471 aa20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 ADCY9O60503 1353 aa20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 USP54Q70EL1 1684 aa20.67■□□□□ 0.9
TOM1L1-221ENST00000575882 PTH1RQ03431 593 aa20.66■□□□□ 0.9
TOM1L1-221ENST00000575882 CLASRPQ8N2M8 674 aaKnown RBP20.66■□□□□ 0.9
TOM1L1-221ENST00000575882 KIF13AQ9H1H9 1805 aa20.66■□□□□ 0.9
TOM1L1-221ENST00000575882 PRPF40BQ6NWY9 871 aaKnown RBP20.66■□□□□ 0.9
TOM1L1-221ENST00000575882 JAKMIP1Q96N16 626 aaKnown RBP20.66■□□□□ 0.9
TOM1L1-221ENST00000575882 PDRG1Q9NUG6 133 aa20.66■□□□□ 0.9
TOM1L1-221ENST00000575882 GJB2P29033 226 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 ADCK5Q3MIX3 580 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 CHMP4AQ9BY43 222 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 ADCY5O95622 1261 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 NBPF6Q5VWK0 638 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 NBPF4Q96M43 638 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
TOM1L1-221ENST00000575882 DYNC1I1O14576 645 aa20.64■□□□□ 0.9
TOM1L1-221ENST00000575882 DTNBO60941 627 aa20.64■□□□□ 0.9
TOM1L1-221ENST00000575882 KCNA6P17658 529 aa20.64■□□□□ 0.9
TOM1L1-221ENST00000575882 MTX1Q13505 466 aa20.64■□□□□ 0.9
TOM1L1-221ENST00000575882 VPS53Q5VIR6 699 aa20.64■□□□□ 0.9
TOM1L1-221ENST00000575882 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.89
TOM1L1-221ENST00000575882 IP6K1Q92551 441 aa20.64■□□□□ 0.89
TOM1L1-221ENST00000575882 ZNF830Q96NB3 372 aaPredicted RBP20.64■□□□□ 0.89
TOM1L1-221ENST00000575882 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 TEFQ10587 303 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 MTMR6Q9Y217 621 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 CYP46A1Q9Y6A2 500 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 DNM1Q05193 864 aaKnown RBP20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 GPATCH3Q96I76 525 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 MAP7D2Q96T17 732 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 ZSWIM6Q9HCJ5 1215 aa20.63■□□□□ 0.89
TOM1L1-221ENST00000575882 LTN1O94822 1766 aa20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 ZSCAN31Q96LW9 406 aaPredicted RBP20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 C9orf78Q9NZ63 289 aaPredicted RBP20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 PA2G4Q9UQ80 394 aaKnown RBP20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 TM6SF1Q9BZW5 370 aa20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 ZMYND15Q9H091 742 aa20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 SH2B1Q9NRF2 756 aaPredicted RBP20.62■□□□□ 0.89
TOM1L1-221ENST00000575882 ZBTB7CA1YPR0 619 aa20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 GIMAP6Q6P9H5 292 aa20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 DBF4Q9UBU7 674 aaPredicted RBP20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 DNTTIP2Q5QJE6 756 aaKnown RBP20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 DDX54Q8TDD1 881 aaKnown RBP20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 PIBF1Q8WXW3 757 aa20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 KCNB2Q92953 911 aa20.61■□□□□ 0.89
TOM1L1-221ENST00000575882 ST3GAL1Q11201 340 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 MPRIPQ6WCQ1 1025 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 ERC1Q8IUD2 1116 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 EVI5LQ96CN4 794 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 FUCA2Q9BTY2 467 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 TTC12Q9H892 705 aaPredicted RBP20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 CCDC171Q6TFL3 1326 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 VPS37CA5D8V6 355 aaPredicted RBP20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 KDM4AO75164 1064 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 NECTIN1Q15223 517 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 AACSQ86V21 672 aa20.6■□□□□ 0.89
TOM1L1-221ENST00000575882 ME3Q16798 604 aa20.59■□□□□ 0.89
TOM1L1-221ENST00000575882 AKAP4Q5JQC9 854 aa20.59■□□□□ 0.89
TOM1L1-221ENST00000575882 THEMISQ8N1K5 641 aaPredicted RBP20.59■□□□□ 0.89
TOM1L1-221ENST00000575882 ALDH1L1O75891 902 aa20.59■□□□□ 0.89
TOM1L1-221ENST00000575882 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
TOM1L1-221ENST00000575882 NECAB1Q8N987 351 aa20.58■□□□□ 0.89
TOM1L1-221ENST00000575882 RBM8AQ9Y5S9 174 aaKnown RBP20.58■□□□□ 0.89
TOM1L1-221ENST00000575882 NOLC1Q14978 699 aaKnown RBP eCLIP20.58■□□□□ 0.88
TOM1L1-221ENST00000575882 PROSER3Q2NL68 480 aa20.58■□□□□ 0.88
TOM1L1-221ENST00000575882 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.88
TOM1L1-221ENST00000575882 PHF8Q9UPP1 1060 aa20.58■□□□□ 0.88
TOM1L1-221ENST00000575882 KCNJ4P48050 445 aa20.57■□□□□ 0.88
TOM1L1-221ENST00000575882 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
TOM1L1-221ENST00000575882 NFAT5O94916 1531 aa20.57■□□□□ 0.88
TOM1L1-221ENST00000575882 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
TOM1L1-221ENST00000575882 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
TOM1L1-221ENST00000575882 LRRC59Q96AG4 307 aaKnown RBP20.57■□□□□ 0.88
TOM1L1-221ENST00000575882 C17orf53Q8N3J3 647 aaPredicted RBP20.56■□□□□ 0.88
TOM1L1-221ENST00000575882 FAM227BQ96M60 508 aa20.56■□□□□ 0.88
TOM1L1-221ENST00000575882 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
TOM1L1-221ENST00000575882 PLEKHO1Q53GL0 409 aaPredicted RBP20.56■□□□□ 0.88
TOM1L1-221ENST00000575882 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
TOM1L1-221ENST00000575882 LMO7Q8WWI1 1683 aa20.56■□□□□ 0.88
TOM1L1-221ENST00000575882 NMIQ13287 307 aaPredicted RBP20.55■□□□□ 0.88
TOM1L1-221ENST00000575882 HDAC5Q9UQL6 1122 aa20.55■□□□□ 0.88
TOM1L1-221ENST00000575882 MTERF4Q7Z6M4 381 aaKnown RBP20.55■□□□□ 0.88
TOM1L1-221ENST00000575882 MYRIPQ8NFW9 859 aa20.55■□□□□ 0.88
TOM1L1-221ENST00000575882 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
TOM1L1-221ENST00000575882 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
TOM1L1-221ENST00000575882 MAP4K1Q92918 833 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms