RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ABT1Q9ULW3 272 aaKnown RBP22.12■■□□□ 1.13
CTDNEP1-211ENST00000575783 WDR33Q9C0J8 1336 aaKnown RBP22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 ZNF541Q9H0D2 1346 aa22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 RASSF10A6NK89 507 aa22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 CCDC85CA6NKD9 419 aa22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 CCDC93Q567U6 631 aa22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 TEX13AQ9BXU3 409 aaPredicted RBP22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 FER1L6Q2WGJ9 1857 aa22.11■■□□□ 1.13
CTDNEP1-211ENST00000575783 A1BGP04217 495 aa22.1■■□□□ 1.13
CTDNEP1-211ENST00000575783 C7orf43Q8WVR3 580 aa22.1■■□□□ 1.13
CTDNEP1-211ENST00000575783 ANKRD31Q8N7Z5 1873 aa22.09■■□□□ 1.13
CTDNEP1-211ENST00000575783 CAMTA2O94983 1202 aa22.09■■□□□ 1.13
CTDNEP1-211ENST00000575783 PNMA8AQ86V59 439 aaPredicted RBP22.09■■□□□ 1.13
CTDNEP1-211ENST00000575783 KNSTRNQ9Y448 316 aa22.09■■□□□ 1.13
CTDNEP1-211ENST00000575783 DICER1Q9UPY3 1922 aaKnown RBP22.09■■□□□ 1.13
CTDNEP1-211ENST00000575783 FKBP4Q02790 459 aaKnown RBP eCLIP22.08■■□□□ 1.13
CTDNEP1-211ENST00000575783 MLLT1Q03111 559 aaPredicted RBP22.08■■□□□ 1.13
CTDNEP1-211ENST00000575783 ZNF790Q6PG37 636 aa22.08■■□□□ 1.13
CTDNEP1-211ENST00000575783 OLFM4Q6UX06 510 aa22.08■■□□□ 1.13
CTDNEP1-211ENST00000575783 HEG1Q9ULI3 1381 aa22.08■■□□□ 1.12
CTDNEP1-211ENST00000575783 COL11A2P13942 1736 aaPredicted RBP22.08■■□□□ 1.12
CTDNEP1-211ENST00000575783 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
CTDNEP1-211ENST00000575783 TEFQ10587 303 aa22.07■■□□□ 1.12
CTDNEP1-211ENST00000575783 NBPF5PQ86XG9 351 aaPredicted RBP22.07■■□□□ 1.12
CTDNEP1-211ENST00000575783 SLX4Q8IY92 1834 aa22.07■■□□□ 1.12
CTDNEP1-211ENST00000575783 GRM1Q13255 1194 aa22.06■■□□□ 1.12
CTDNEP1-211ENST00000575783 PAXIP1Q6ZW49 1069 aaPredicted RBP22.06■■□□□ 1.12
CTDNEP1-211ENST00000575783 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
CTDNEP1-211ENST00000575783 NPR1P16066 1061 aa22.05■■□□□ 1.12
CTDNEP1-211ENST00000575783 BEGAINQ9BUH8 593 aa22.05■■□□□ 1.12
CTDNEP1-211ENST00000575783 RTKN2Q8IZC4 609 aa22.04■■□□□ 1.12
CTDNEP1-211ENST00000575783 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
CTDNEP1-211ENST00000575783 HSPA5P11021 654 aaKnown RBP22.03■■□□□ 1.12
CTDNEP1-211ENST00000575783 PIP4K2AP48426 406 aaPredicted RBP22.03■■□□□ 1.12
CTDNEP1-211ENST00000575783 FMNL2Q96PY5 1086 aa22.03■■□□□ 1.12
CTDNEP1-211ENST00000575783 DDX21Q9NR30 783 aaKnown RBP eCLIP22.03■■□□□ 1.12
CTDNEP1-211ENST00000575783 SCN4AP35499 1836 aa22.02■■□□□ 1.12
CTDNEP1-211ENST00000575783 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
CTDNEP1-211ENST00000575783 EIF4G2P78344 907 aaKnown RBP eCLIP22.02■■□□□ 1.12
CTDNEP1-211ENST00000575783 SYNE4Q8N205 404 aa22.02■■□□□ 1.12
CTDNEP1-211ENST00000575783 FAM177BA6PVY3 158 aa22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 FZD9O00144 591 aa22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 IARSP41252 1262 aaKnown RBP22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 FMR1Q06787 632 aaKnown RBP eCLIP22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 GPC2Q8N158 579 aa22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 CAPNS2Q96L46 248 aa22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 GJA3Q9Y6H8 435 aa22.01■■□□□ 1.11
CTDNEP1-211ENST00000575783 GNAT3A8MTJ3 354 aa22■■□□□ 1.11
CTDNEP1-211ENST00000575783 CFAP44Q96MT7 982 aa22■■□□□ 1.11
CTDNEP1-211ENST00000575783 GPR101Q96P66 508 aaPredicted RBP22■■□□□ 1.11
CTDNEP1-211ENST00000575783 TIMELESSQ9UNS1 1208 aa22■■□□□ 1.11
CTDNEP1-211ENST00000575783 SCN7AQ01118 1682 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 KCNQ3O43525 872 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 ECE1P42892 770 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 RGS19P49795 217 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 CYP4F22Q6NT55 531 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 TPTE2Q6XPS3 522 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 JDP2Q8WYK2 163 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 TSKSQ9UJT2 592 aa21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
CTDNEP1-211ENST00000575783 KLRG2A4D1S0 409 aaPredicted RBP21.98■■□□□ 1.11
CTDNEP1-211ENST00000575783 CLEC4GQ6UXB4 293 aa21.98■■□□□ 1.11
CTDNEP1-211ENST00000575783 ZNF652Q9Y2D9 606 aa21.98■■□□□ 1.11
CTDNEP1-211ENST00000575783 USP16Q9Y5T5 823 aa21.98■■□□□ 1.11
CTDNEP1-211ENST00000575783 UBR2Q8IWV8 1755 aa21.97■■□□□ 1.11
CTDNEP1-211ENST00000575783 LMOD1P29536 600 aaPredicted RBP21.97■■□□□ 1.11
CTDNEP1-211ENST00000575783 ALDH1B1P30837 517 aa21.97■■□□□ 1.11
CTDNEP1-211ENST00000575783 AMER1Q5JTC6 1135 aaPredicted RBP21.97■■□□□ 1.11
CTDNEP1-211ENST00000575783 PCDH10Q9P2E7 1040 aa21.97■■□□□ 1.11
CTDNEP1-211ENST00000575783 NIP7Q9Y221 180 aaKnown RBP eCLIP21.97■■□□□ 1.11
CTDNEP1-211ENST00000575783 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
CTDNEP1-211ENST00000575783 EIF6P56537 245 aaKnown RBP21.96■■□□□ 1.11
CTDNEP1-211ENST00000575783 U2SURPO15042 1029 aaKnown RBP21.95■■□□□ 1.1
CTDNEP1-211ENST00000575783 GAS2L2Q8NHY3 880 aa21.95■■□□□ 1.1
CTDNEP1-211ENST00000575783 CACNA1SQ13698 1873 aa21.94■■□□□ 1.1
CTDNEP1-211ENST00000575783 PRAMEF22A3QJZ6 481 aa21.94■■□□□ 1.1
CTDNEP1-211ENST00000575783 TRAF5O00463 557 aa21.94■■□□□ 1.1
CTDNEP1-211ENST00000575783 GTF2E1P29083 439 aaPredicted RBP21.94■■□□□ 1.1
CTDNEP1-211ENST00000575783 EPS15P42566 896 aa21.94■■□□□ 1.1
CTDNEP1-211ENST00000575783 ADAMTSL1Q8N6G6 1762 aa21.94■■□□□ 1.1
CTDNEP1-211ENST00000575783 AOC2O75106 756 aa21.93■■□□□ 1.1
CTDNEP1-211ENST00000575783 CST9Q5W186 159 aa21.93■■□□□ 1.1
CTDNEP1-211ENST00000575783 PSMD1Q99460 953 aa21.92■■□□□ 1.1
CTDNEP1-211ENST00000575783 SCNN1DP51172 638 aa21.9■■□□□ 1.1
CTDNEP1-211ENST00000575783 CC2D1BQ5T0F9 858 aaKnown RBP21.9■■□□□ 1.1
CTDNEP1-211ENST00000575783 MCOLN1Q9GZU1 580 aa21.9■■□□□ 1.1
CTDNEP1-211ENST00000575783 TLL2Q9Y6L7 1015 aa21.9■■□□□ 1.1
CTDNEP1-211ENST00000575783 ARFGEF2Q9Y6D5 1785 aa21.89■■□□□ 1.1
CTDNEP1-211ENST00000575783 MAP2K2P36507 400 aa21.89■■□□□ 1.09
CTDNEP1-211ENST00000575783 USP50Q70EL3 339 aaPredicted RBP21.89■■□□□ 1.09
CTDNEP1-211ENST00000575783 LARGE2Q8N3Y3 721 aa21.89■■□□□ 1.09
CTDNEP1-211ENST00000575783 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
CTDNEP1-211ENST00000575783 CNGB1Q14028 1251 aaPredicted RBP21.88■■□□□ 1.09
CTDNEP1-211ENST00000575783 HLFQ16534 295 aa21.88■■□□□ 1.09
CTDNEP1-211ENST00000575783 NBPF26B4DH59 902 aa21.86■■□□□ 1.09
CTDNEP1-211ENST00000575783 TCERG1O14776 1098 aaKnown RBP21.86■■□□□ 1.09
CTDNEP1-211ENST00000575783 CC2D2BQ6DHV5 1058 aa21.86■■□□□ 1.09
CTDNEP1-211ENST00000575783 NBPF10Q6P3W6 841 aaKnown RBP21.86■■□□□ 1.09
CTDNEP1-211ENST00000575783 NBPF15Q8N660 670 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms