RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
NDE1-207ENST00000573203 LAMB4A4D0S4 1761 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 UTRNP46939 3433 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 PXDNLA1KZ92 1463 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 POLRMTO00411 1230 aaKnown RBP11.92□□□□□ -0.5
NDE1-207ENST00000573203 NFIXQ14938 502 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 NEUROD2Q15784 382 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
NDE1-207ENST00000573203 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
NDE1-207ENST00000573203 AFDNP55196 1824 aaKnown RBP11.92□□□□□ -0.5
NDE1-207ENST00000573203 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
NDE1-207ENST00000573203 PIP4K2AP48426 406 aaPredicted RBP11.91□□□□□ -0.5
NDE1-207ENST00000573203 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
NDE1-207ENST00000573203 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
NDE1-207ENST00000573203 GABBR2O75899 941 aa11.9□□□□□ -0.5
NDE1-207ENST00000573203 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
NDE1-207ENST00000573203 BICDL1Q6ZP65 573 aa11.9□□□□□ -0.5
NDE1-207ENST00000573203 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
NDE1-207ENST00000573203 BCORQ6W2J9 1755 aa11.9□□□□□ -0.51
NDE1-207ENST00000573203 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
NDE1-207ENST00000573203 SERPINB2P05120 415 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 DPEP1P16444 411 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 BCS1LQ9Y276 419 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 BRCA1P38398 1863 aaKnown RBP11.89□□□□□ -0.51
NDE1-207ENST00000573203 NRXN2Q9P2S2 1712 aa11.89□□□□□ -0.51
NDE1-207ENST00000573203 ANP32CO43423 234 aa11.88□□□□□ -0.51
NDE1-207ENST00000573203 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
NDE1-207ENST00000573203 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
NDE1-207ENST00000573203 NBPF26B4DH59 902 aa11.87□□□□□ -0.51
NDE1-207ENST00000573203 NBPF10Q6P3W6 841 aaKnown RBP11.87□□□□□ -0.51
NDE1-207ENST00000573203 NBPF15Q8N660 670 aa11.87□□□□□ -0.51
NDE1-207ENST00000573203 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
NDE1-207ENST00000573203 LAS1LQ9Y4W2 734 aaKnown RBP11.87□□□□□ -0.51
NDE1-207ENST00000573203 NPHP1O15259 732 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
NDE1-207ENST00000573203 KCNA3P22001 575 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 CHRNA5P30532 468 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 NGEFQ8N5V2 710 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 ZNF784Q8NCA9 323 aaPredicted RBP11.86□□□□□ -0.51
NDE1-207ENST00000573203 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 ZNF652Q9Y2D9 606 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
NDE1-207ENST00000573203 APAF1O14727 1248 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 MYL6BP14649 208 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 NUBP1P53384 320 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 CCDC184Q52MB2 194 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 CLEC4GQ6UXB4 293 aa11.85□□□□□ -0.51
NDE1-207ENST00000573203 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
NDE1-207ENST00000573203 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
NDE1-207ENST00000573203 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
NDE1-207ENST00000573203 ANKRD31Q8N7Z5 1873 aa11.84□□□□□ -0.51
NDE1-207ENST00000573203 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
NDE1-207ENST00000573203 H0YIN7 160 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 CHL1O00533 1208 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 ST5P78524 1137 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 PRR5LQ6MZQ0 368 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 KIF6Q6ZMV9 814 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 ARHGAP27Q6ZUM4 889 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 NUP98P52948 1817 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 ERBB4Q15303 1308 aa11.83□□□□□ -0.52
NDE1-207ENST00000573203 RGL2O15211 777 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 PDE6BP35913 854 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 HLFQ16534 295 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 NBPF5PQ86XG9 351 aaPredicted RBP11.82□□□□□ -0.52
NDE1-207ENST00000573203 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 BRIP1Q9BX63 1249 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
NDE1-207ENST00000573203 MAP3K15Q6ZN16 1313 aa11.82□□□□□ -0.52
NDE1-207ENST00000573203 ERVV-1B6SEH8 477 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
NDE1-207ENST00000573203 TTLL7Q6ZT98 887 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 TSPYL2Q9H2G4 693 aaPredicted RBP11.81□□□□□ -0.52
NDE1-207ENST00000573203 PDZRN3Q9UPQ7 1066 aa11.81□□□□□ -0.52
NDE1-207ENST00000573203 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 KRT24Q2M2I5 525 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 TTLL6Q8N841 843 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 ZNF622Q969S3 477 aaKnown RBP eCLIP11.8□□□□□ -0.521e-8■□□□□ 8.5
NDE1-207ENST00000573203 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
NDE1-207ENST00000573203 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
NDE1-207ENST00000573203 ATP10DQ9P241 1426 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 ANXA1P04083 346 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 GTF2E1P29083 439 aaPredicted RBP11.79□□□□□ -0.52
NDE1-207ENST00000573203 GNAI1P63096 354 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 PDIA6Q15084 440 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 TPTE2Q6XPS3 522 aa11.79□□□□□ -0.52
NDE1-207ENST00000573203 FAM212AQ96EL1 285 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms