RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 AK2P54819 239 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 AACSQ86V21 672 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 ECHDC1Q9NTX5 307 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
RPAIN-212ENST00000573126 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 SUCLG2Q96I99 432 aa13.55□□□□□ -0.24
RPAIN-212ENST00000573126 GRM8O00222 908 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 MBD3O95983 291 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 PTH1RQ03431 593 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 KAZALD1Q96I82 304 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 TTC14Q96N46 770 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
RPAIN-212ENST00000573126 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
RPAIN-212ENST00000573126 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 LRSAM1Q6UWE0 723 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 RUFY3Q7L099 469 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 RNF214Q8ND24 703 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 DDX54Q8TDD1 881 aaKnown RBP13.54□□□□□ -0.24
RPAIN-212ENST00000573126 SIL1Q9H173 461 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
RPAIN-212ENST00000573126 NCAPD2Q15021 1401 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 GADD45BO75293 160 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-212ENST00000573126 MYL6BP14649 208 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
RPAIN-212ENST00000573126 LINS1Q8NG48 757 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 WDR33Q9C0J8 1336 aaKnown RBP13.53□□□□□ -0.24
RPAIN-212ENST00000573126 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 KLHDC4Q8TBB5 520 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 ERBB3P21860 1342 aa13.53□□□□□ -0.24
RPAIN-212ENST00000573126 PDIA6Q15084 440 aa13.52□□□□□ -0.24
RPAIN-212ENST00000573126 GPATCH3Q96I76 525 aa13.52□□□□□ -0.24
RPAIN-212ENST00000573126 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.24
RPAIN-212ENST00000573126 DDX21Q9NR30 783 aaKnown RBP eCLIP13.52□□□□□ -0.24
RPAIN-212ENST00000573126 LIMCH1Q9UPQ0 1083 aa13.52□□□□□ -0.24
RPAIN-212ENST00000573126 RPAP1Q9BWH6 1393 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-212ENST00000573126 SASH1O94885 1247 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 LARGE1O95461 756 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
RPAIN-212ENST00000573126 RIC3Q7Z5B4 369 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 USP48Q86UV5 1035 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 RUFY2Q8WXA3 655 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-212ENST00000573126 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.25
RPAIN-212ENST00000573126 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
RPAIN-212ENST00000573126 NPHP4O75161 1426 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
RPAIN-212ENST00000573126 PIP4K2AP48426 406 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
RPAIN-212ENST00000573126 ZSCAN30Q86W11 494 aa13.51□□□□□ -0.25
RPAIN-212ENST00000573126 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 G3BP1Q13283 466 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 RAPGEF4Q8WZA2 1011 aa13.51□□□□□ -0.25
RPAIN-212ENST00000573126 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 FAM227BQ96M60 508 aa13.51□□□□□ -0.25
RPAIN-212ENST00000573126 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
RPAIN-212ENST00000573126 SLIT3O75094 1523 aa13.5□□□□□ -0.25
RPAIN-212ENST00000573126 SYT1P21579 422 aa13.5□□□□□ -0.25
RPAIN-212ENST00000573126 NFATC2IPQ8NCF5 419 aa13.5□□□□□ -0.25
RPAIN-212ENST00000573126 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
RPAIN-212ENST00000573126 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
RPAIN-212ENST00000573126 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-212ENST00000573126 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 CNPY2Q9Y2B0 182 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 OVOS2A0A0G2JMS6 1433 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 STX6O43752 255 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 MSNP26038 577 aaKnown RBP13.49□□□□□ -0.25
RPAIN-212ENST00000573126 XAGE3Q8WTP9 111 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 PDLIM2Q96JY6 352 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
RPAIN-212ENST00000573126 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-212ENST00000573126 ZSCAN22P10073 491 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-212ENST00000573126 KCNJ4P48050 445 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-212ENST00000573126 COPS6Q7L5N1 327 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 CCDC171Q6TFL3 1326 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 NMIQ13287 307 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-212ENST00000573126 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-212ENST00000573126 MYD88Q99836 296 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 UTYO14607 1347 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 NEXNQ0ZGT2 675 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 SYAP1Q96A49 352 aaPredicted RBP13.48□□□□□ -0.25
RPAIN-212ENST00000573126 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
RPAIN-212ENST00000573126 CYP46A1Q9Y6A2 500 aa13.48□□□□□ -0.25
RPAIN-212ENST00000573126 FIBPO43427 364 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 NECTIN1Q15223 517 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
RPAIN-212ENST00000573126 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-212ENST00000573126 CRYBG1Q9Y4K1 1723 aa13.47□□□□□ -0.25
RPAIN-212ENST00000573126 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms