RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 LRRFIP2Q9Y608 721 aaKnown RBP19.97■□□□□ 0.79
LITAF-209ENST00000571688 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
LITAF-209ENST00000571688 TTC21AQ8NDW8 1320 aa19.97■□□□□ 0.79
LITAF-209ENST00000571688 CDC25BP30305 580 aa19.96■□□□□ 0.79
LITAF-209ENST00000571688 AKAP12Q02952 1782 aa19.96■□□□□ 0.79
LITAF-209ENST00000571688 CKAP2LQ8IYA6 745 aa19.96■□□□□ 0.79
LITAF-209ENST00000571688 SETD1AO15047 1707 aaKnown RBP19.96■□□□□ 0.79
LITAF-209ENST00000571688 PDRG1Q9NUG6 133 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 CLIP2Q9UDT6 1046 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 ZBTB22O15209 634 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 DTNBO60941 627 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 FLIIQ13045 1269 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 CCDC144BQ3MJ40 725 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 CCDC144CPQ8IYA2 1237 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 CNTROBQ8N137 903 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 SSH3Q8TE77 659 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 DDX19AQ9NUU7 478 aaKnown RBP19.95■□□□□ 0.78
LITAF-209ENST00000571688 DACT1Q9NYF0 836 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 TSPYL4Q9UJ04 414 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 CHMP3Q9Y3E7 222 aa19.95■□□□□ 0.78
LITAF-209ENST00000571688 RAB11FIP3O75154 756 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 TM6SF1Q9BZW5 370 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 PDIA4P13667 645 aaKnown RBP19.94■□□□□ 0.78
LITAF-209ENST00000571688 STK31Q9BXU1 1019 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 CLSTN2Q9H4D0 955 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 ZSWIM6Q9HCJ5 1215 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
LITAF-209ENST00000571688 FAM193AP78312 1265 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 IRX5P78411 483 aaPredicted RBP19.93■□□□□ 0.78
LITAF-209ENST00000571688 ZNF215Q9UL58 517 aaPredicted RBP19.93■□□□□ 0.78
LITAF-209ENST00000571688 SPG7Q9UQ90 795 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 PXDNLA1KZ92 1463 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 RBM6P78332 1123 aaKnown RBP19.93■□□□□ 0.78
LITAF-209ENST00000571688 ME3Q16798 604 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 SLFNL1Q499Z3 407 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 NYAP1Q6ZVC0 841 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 KCNB2Q92953 911 aa19.93■□□□□ 0.78
LITAF-209ENST00000571688 ADCK5Q3MIX3 580 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 CWC27Q6UX04 472 aaKnown RBP19.92■□□□□ 0.78
LITAF-209ENST00000571688 CDC37L1Q7L3B6 337 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 JAKMIP1Q96N16 626 aaKnown RBP19.92■□□□□ 0.78
LITAF-209ENST00000571688 WASLO00401 505 aaPredicted RBP19.92■□□□□ 0.78
LITAF-209ENST00000571688 KCNJ4P48050 445 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
LITAF-209ENST00000571688 LRRC8AQ8IWT6 810 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 ZNF592Q92610 1267 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 ADGRL3Q9HAR2 1447 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
LITAF-209ENST00000571688 ZNF165P49910 485 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 ERO1AQ96HE7 468 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 CYP46A1Q9Y6A2 500 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 FBXO38Q6PIJ6 1188 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 RHPN1Q8TCX5 695 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 TIGD1Q96MW7 591 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 USP44Q9H0E7 712 aa19.91■□□□□ 0.78
LITAF-209ENST00000571688 USP27XA6NNY8 438 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 NEMFO60524 1076 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 FAM173BQ6P4H8 233 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 CREBRFQ8IUR6 639 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 SCAND2PQ9GZW5 306 aaPredicted RBP19.9■□□□□ 0.78
LITAF-209ENST00000571688 ERBB3P21860 1342 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 POLA2Q14181 598 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 SARM1Q6SZW1 724 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 FERMT3Q86UX7 667 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 DNAJC25Q9H1X3 360 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 PEAK1Q9H792 1746 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
LITAF-209ENST00000571688 PTPN14Q15678 1187 aa19.89■□□□□ 0.78
LITAF-209ENST00000571688 NECAB1Q8N987 351 aa19.89■□□□□ 0.78
LITAF-209ENST00000571688 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
LITAF-209ENST00000571688 UBTFL1P0CB47 393 aaPredicted RBP19.89■□□□□ 0.77
LITAF-209ENST00000571688 PTH1RQ03431 593 aa19.89■□□□□ 0.77
LITAF-209ENST00000571688 PDE4CQ08493 712 aa19.89■□□□□ 0.77
LITAF-209ENST00000571688 CAVIN2O95810 425 aa19.89■□□□□ 0.77
LITAF-209ENST00000571688 MAP3K5Q99683 1374 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
LITAF-209ENST00000571688 GOLGA6L4A6NEF3 574 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 SURF6O75683 361 aaKnown RBP19.88■□□□□ 0.77
LITAF-209ENST00000571688 PDCP20941 246 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 ELF2Q15723 593 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 CCDC30Q5VVM6 783 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 PRPF40BQ6NWY9 871 aaKnown RBP19.88■□□□□ 0.77
LITAF-209ENST00000571688 KIF1BPQ96EK5 621 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 MRFAP1L1Q96HT8 127 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 SPATA32Q96LK8 384 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 CALCOCO1Q9P1Z2 691 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 SLC20A2Q08357 652 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 LEO1Q8WVC0 666 aaPredicted RBP19.88■□□□□ 0.77
LITAF-209ENST00000571688 NUDT16Q96DE0 195 aaKnown RBP19.88■□□□□ 0.77
LITAF-209ENST00000571688 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.88■□□□□ 0.77
LITAF-209ENST00000571688 TPCN1Q9ULQ1 816 aa19.88■□□□□ 0.77
LITAF-209ENST00000571688 V9GYY5 206 aaPredicted RBP19.88■□□□□ 0.77
LITAF-209ENST00000571688 FOXO3O43524 673 aa19.87■□□□□ 0.77
LITAF-209ENST00000571688 PPP1R42Q7Z4L9 355 aa19.87■□□□□ 0.77
LITAF-209ENST00000571688 RIMS1Q86UR5 1692 aaKnown RBP19.87■□□□□ 0.77
LITAF-209ENST00000571688 NR1I2O75469 434 aa19.87■□□□□ 0.77
LITAF-209ENST00000571688 CDK11BP21127 795 aaKnown RBP19.87■□□□□ 0.77
LITAF-209ENST00000571688 IQCB1Q15051 598 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms