RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 ITGBL1O95965 494 aaPredicted RBP15.36■□□□□ 0.05
CHMP6-202ENST00000571457 MAP2K1Q02750 393 aaPredicted RBP15.36■□□□□ 0.05
CHMP6-202ENST00000571457 TEFQ10587 303 aa15.36■□□□□ 0.05
CHMP6-202ENST00000571457 CCDC93Q567U6 631 aa15.36■□□□□ 0.05
CHMP6-202ENST00000571457 EAPPQ56P03 285 aaPredicted RBP15.36■□□□□ 0.05
CHMP6-202ENST00000571457 PNMA8AQ86V59 439 aaPredicted RBP15.36■□□□□ 0.05
CHMP6-202ENST00000571457 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
CHMP6-202ENST00000571457 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
CHMP6-202ENST00000571457 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
CHMP6-202ENST00000571457 HEG1Q9ULI3 1381 aa15.36■□□□□ 0.05
CHMP6-202ENST00000571457 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
CHMP6-202ENST00000571457 RASSF10A6NK89 507 aa15.34■□□□□ 0.05
CHMP6-202ENST00000571457 CAMTA2O94983 1202 aa15.34■□□□□ 0.05
CHMP6-202ENST00000571457 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
CHMP6-202ENST00000571457 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
CHMP6-202ENST00000571457 ABHD8Q96I13 439 aa15.34■□□□□ 0.05
CHMP6-202ENST00000571457 NPR1P16066 1061 aa15.33■□□□□ 0.04
CHMP6-202ENST00000571457 EPHX2P34913 555 aa15.33■□□□□ 0.04
CHMP6-202ENST00000571457 FKBP4Q02790 459 aaKnown RBP eCLIP15.33■□□□□ 0.04
CHMP6-202ENST00000571457 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
CHMP6-202ENST00000571457 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
CHMP6-202ENST00000571457 CACNA1SQ13698 1873 aa15.33■□□□□ 0.04
CHMP6-202ENST00000571457 DIAPH1O60610 1272 aaKnown RBP15.32■□□□□ 0.04
CHMP6-202ENST00000571457 HSPA8P11142 646 aaKnown RBP15.32■□□□□ 0.04
CHMP6-202ENST00000571457 CLEC4GQ6UXB4 293 aa15.32■□□□□ 0.04
CHMP6-202ENST00000571457 NBPF5PQ86XG9 351 aaPredicted RBP15.32■□□□□ 0.04
CHMP6-202ENST00000571457 RTKN2Q8IZC4 609 aa15.32■□□□□ 0.04
CHMP6-202ENST00000571457 CNTROBQ8N137 903 aa15.32■□□□□ 0.04
CHMP6-202ENST00000571457 GNAT3A8MTJ3 354 aa15.31■□□□□ 0.04
CHMP6-202ENST00000571457 A1BGP04217 495 aa15.31■□□□□ 0.04
CHMP6-202ENST00000571457 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
CHMP6-202ENST00000571457 DZIP3Q86Y13 1208 aaKnown RBP15.31■□□□□ 0.04
CHMP6-202ENST00000571457 ZNF277Q9NRM2 450 aaPredicted RBP15.31■□□□□ 0.04
CHMP6-202ENST00000571457 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
CHMP6-202ENST00000571457 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
CHMP6-202ENST00000571457 WDR33Q9C0J8 1336 aaKnown RBP15.31■□□□□ 0.04
CHMP6-202ENST00000571457 ZNF541Q9H0D2 1346 aa15.31■□□□□ 0.04
CHMP6-202ENST00000571457 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
CHMP6-202ENST00000571457 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
CHMP6-202ENST00000571457 GPC2Q8N158 579 aa15.3■□□□□ 0.04
CHMP6-202ENST00000571457 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
CHMP6-202ENST00000571457 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
CHMP6-202ENST00000571457 KLRG2A4D1S0 409 aaPredicted RBP15.29■□□□□ 0.04
CHMP6-202ENST00000571457 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
CHMP6-202ENST00000571457 TPTE2Q6XPS3 522 aa15.29■□□□□ 0.04
CHMP6-202ENST00000571457 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
CHMP6-202ENST00000571457 RNF123Q5XPI4 1314 aa15.28■□□□□ 0.04
CHMP6-202ENST00000571457 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
CHMP6-202ENST00000571457 FZD9O00144 591 aa15.28■□□□□ 0.04
CHMP6-202ENST00000571457 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
CHMP6-202ENST00000571457 MLLT1Q03111 559 aaPredicted RBP15.28■□□□□ 0.04
CHMP6-202ENST00000571457 JDP2Q8WYK2 163 aa15.28■□□□□ 0.04
CHMP6-202ENST00000571457 ADAMTSL1Q8N6G6 1762 aa15.28■□□□□ 0.04
CHMP6-202ENST00000571457 RGL2O15211 777 aa15.27■□□□□ 0.04
CHMP6-202ENST00000571457 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.04
CHMP6-202ENST00000571457 ECE1P42892 770 aa15.27■□□□□ 0.04
CHMP6-202ENST00000571457 DDX21Q9NR30 783 aaKnown RBP eCLIP15.27■□□□□ 0.04
CHMP6-202ENST00000571457 BCORQ6W2J9 1755 aa15.26■□□□□ 0.03
CHMP6-202ENST00000571457 LMOD1P29536 600 aaPredicted RBP15.26■□□□□ 0.03
CHMP6-202ENST00000571457 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
CHMP6-202ENST00000571457 CCDC85CA6NKD9 419 aa15.25■□□□□ 0.03
CHMP6-202ENST00000571457 BTBD11A6QL63 1104 aa15.25■□□□□ 0.03
CHMP6-202ENST00000571457 EIF6P56537 245 aaKnown RBP15.25■□□□□ 0.03
CHMP6-202ENST00000571457 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
CHMP6-202ENST00000571457 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
CHMP6-202ENST00000571457 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
CHMP6-202ENST00000571457 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
CHMP6-202ENST00000571457 U2SURPO15042 1029 aaKnown RBP15.24■□□□□ 0.03
CHMP6-202ENST00000571457 GTF2E1P29083 439 aaPredicted RBP15.24■□□□□ 0.03
CHMP6-202ENST00000571457 RGS19P49795 217 aa15.24■□□□□ 0.03
CHMP6-202ENST00000571457 CC2D2BQ6DHV5 1058 aa15.24■□□□□ 0.03
CHMP6-202ENST00000571457 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
CHMP6-202ENST00000571457 PSMD1Q99460 953 aa15.24■□□□□ 0.03
CHMP6-202ENST00000571457 CEMIPQ8WUJ3 1361 aa15.24■□□□□ 0.03
CHMP6-202ENST00000571457 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
CHMP6-202ENST00000571457 OLFM4Q6UX06 510 aa15.23■□□□□ 0.03
CHMP6-202ENST00000571457 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
CHMP6-202ENST00000571457 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
CHMP6-202ENST00000571457 GJA3Q9Y6H8 435 aa15.23■□□□□ 0.03
CHMP6-202ENST00000571457 PDE4DIPQ5VU43 2346 aa15.23■□□□□ 0.03
CHMP6-202ENST00000571457 TRIM26Q12899 539 aaPredicted RBP15.22■□□□□ 0.03
CHMP6-202ENST00000571457 GRIPAP1Q4V328 841 aa15.22■□□□□ 0.03
CHMP6-202ENST00000571457 KCNQ3O43525 872 aa15.21■□□□□ 0.03
CHMP6-202ENST00000571457 CA12O43570 354 aa15.21■□□□□ 0.03
CHMP6-202ENST00000571457 MAP2K2P36507 400 aa15.21■□□□□ 0.03
CHMP6-202ENST00000571457 PIP4K2AP48426 406 aaPredicted RBP15.21■□□□□ 0.03
CHMP6-202ENST00000571457 GRM1Q13255 1194 aa15.21■□□□□ 0.03
CHMP6-202ENST00000571457 THSD7BQ9C0I4 1608 aa15.21■□□□□ 0.02
CHMP6-202ENST00000571457 FAM177BA6PVY3 158 aa15.2■□□□□ 0.02
CHMP6-202ENST00000571457 CYP4F22Q6NT55 531 aa15.2■□□□□ 0.02
CHMP6-202ENST00000571457 USP50Q70EL3 339 aaPredicted RBP15.2■□□□□ 0.02
CHMP6-202ENST00000571457 NYXQ9GZU5 481 aa15.2■□□□□ 0.02
CHMP6-202ENST00000571457 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
CHMP6-202ENST00000571457 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
CHMP6-202ENST00000571457 LARGE2Q8N3Y3 721 aa15.19■□□□□ 0.02
CHMP6-202ENST00000571457 TLL2Q9Y6L7 1015 aa15.19■□□□□ 0.02
CHMP6-202ENST00000571457 EPS15P42566 896 aa15.18■□□□□ 0.02
CHMP6-202ENST00000571457 SCNN1DP51172 638 aa15.18■□□□□ 0.02
CHMP6-202ENST00000571457 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
CHMP6-202ENST00000571457 RPGRQ92834 1020 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms