RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 C1QTNF8P60827 252 aa39.78■■■■□ 3.96
CTDNEP1-206ENST00000571409 TTLL6Q8N841 843 aa39.78■■■■□ 3.96
CTDNEP1-206ENST00000571409 TRIM35Q9UPQ4 493 aa39.78■■■■□ 3.96
CTDNEP1-206ENST00000571409 ST5P78524 1137 aa39.77■■■■□ 3.96
CTDNEP1-206ENST00000571409 COL11A2P13942 1736 aaPredicted RBP39.77■■■■□ 3.96
CTDNEP1-206ENST00000571409 MYL6BP14649 208 aa39.76■■■■□ 3.96
CTDNEP1-206ENST00000571409 PDZRN3Q9UPQ7 1066 aa39.76■■■■□ 3.96
CTDNEP1-206ENST00000571409 HLFQ16534 295 aa39.75■■■■□ 3.95
CTDNEP1-206ENST00000571409 NBPF5PQ86XG9 351 aaPredicted RBP39.75■■■■□ 3.95
CTDNEP1-206ENST00000571409 NIP7Q9Y221 180 aaKnown RBP eCLIP39.75■■■■□ 3.95
CTDNEP1-206ENST00000571409 C9orf131Q5VYM1 1079 aa39.73■■■■□ 3.95
CTDNEP1-206ENST00000571409 ZNF622Q969S3 477 aaKnown RBP eCLIP39.73■■■■□ 3.95
CTDNEP1-206ENST00000571409 ERBB4Q15303 1308 aa39.72■■■■□ 3.95
CTDNEP1-206ENST00000571409 ZNF316A6NFI3 1004 aaPredicted RBP39.7■■■■□ 3.95
CTDNEP1-206ENST00000571409 EIF2S2P20042 333 aaKnown RBP39.7■■■■□ 3.95
CTDNEP1-206ENST00000571409 KIF6Q6ZMV9 814 aa39.7■■■■□ 3.95
CTDNEP1-206ENST00000571409 TTLL7Q6ZT98 887 aa39.7■■■■□ 3.95
CTDNEP1-206ENST00000571409 LAS1LQ9Y4W2 734 aaKnown RBP39.7■■■■□ 3.95
CTDNEP1-206ENST00000571409 MAP3K15Q6ZN16 1313 aa39.69■■■■□ 3.94
CTDNEP1-206ENST00000571409 ERVV-1B6SEH8 477 aa39.69■■■■□ 3.94
CTDNEP1-206ENST00000571409 NUP98P52948 1817 aa39.68■■■■□ 3.94
CTDNEP1-206ENST00000571409 CHL1O00533 1208 aa39.68■■■■□ 3.94
CTDNEP1-206ENST00000571409 FAM177BA6PVY3 158 aa39.67■■■■□ 3.94
CTDNEP1-206ENST00000571409 TPTE2Q6XPS3 522 aa39.67■■■■□ 3.94
CTDNEP1-206ENST00000571409 SBF1O95248 1867 aa39.66■■■■□ 3.94
CTDNEP1-206ENST00000571409 RNF181Q9P0P0 153 aa39.66■■■■□ 3.94
CTDNEP1-206ENST00000571409 RASSF7Q02833 373 aa39.65■■■■□ 3.94
CTDNEP1-206ENST00000571409 ZBTB3Q9H5J0 574 aa39.64■■■■□ 3.94
CTDNEP1-206ENST00000571409 SRGNP10124 158 aa39.63■■■■□ 3.93
CTDNEP1-206ENST00000571409 PDIA6Q15084 440 aa39.63■■■■□ 3.93
CTDNEP1-206ENST00000571409 APAF1O14727 1248 aa39.62■■■■□ 3.93
CTDNEP1-206ENST00000571409 STYK1Q6J9G0 422 aa39.62■■■■□ 3.93
CTDNEP1-206ENST00000571409 CACNA1SQ13698 1873 aa39.62■■■■□ 3.93
CTDNEP1-206ENST00000571409 KRT24Q2M2I5 525 aa39.61■■■■□ 3.93
CTDNEP1-206ENST00000571409 CCDC184Q52MB2 194 aa39.61■■■■□ 3.93
CTDNEP1-206ENST00000571409 LRP10Q7Z4F1 713 aa39.61■■■■□ 3.93
CTDNEP1-206ENST00000571409 NECTIN2Q92692 538 aa39.61■■■■□ 3.93
CTDNEP1-206ENST00000571409 CNKSR1Q969H4 720 aa39.6■■■■□ 3.93
CTDNEP1-206ENST00000571409 MASTLQ96GX5 879 aa39.6■■■■□ 3.93
CTDNEP1-206ENST00000571409 ZNF219Q9P2Y4 722 aaPredicted RBP39.6■■■■□ 3.93
CTDNEP1-206ENST00000571409 ANXA1P04083 346 aa39.59■■■■□ 3.93
CTDNEP1-206ENST00000571409 PROSER3Q2NL68 480 aa39.59■■■■□ 3.93
CTDNEP1-206ENST00000571409 C21orf2O43822 256 aa39.58■■■■□ 3.93
CTDNEP1-206ENST00000571409 GTF2E1P29083 439 aaPredicted RBP39.58■■■■□ 3.93
CTDNEP1-206ENST00000571409 CFAP44Q96MT7 982 aa39.58■■■■□ 3.93
CTDNEP1-206ENST00000571409 ARFGEF2Q9Y6D5 1785 aa39.57■■■■□ 3.93
CTDNEP1-206ENST00000571409 SLX4Q8IY92 1834 aa39.56■■■■□ 3.92
CTDNEP1-206ENST00000571409 GPTP24298 496 aa39.56■■■■□ 3.92
CTDNEP1-206ENST00000571409 GIGYF2Q6Y7W6 1299 aaKnown RBP39.56■■■■□ 3.92
CTDNEP1-206ENST00000571409 NYXQ9GZU5 481 aa39.56■■■■□ 3.92
CTDNEP1-206ENST00000571409 SENP3-EIF4A1A0A087X0R7 540 aa39.55■■■■□ 3.92
CTDNEP1-206ENST00000571409 NFKBIEO00221 500 aa39.55■■■■□ 3.92
CTDNEP1-206ENST00000571409 KIF3CO14782 793 aa39.55■■■■□ 3.92
CTDNEP1-206ENST00000571409 LMNB1P20700 586 aa39.55■■■■□ 3.92
CTDNEP1-206ENST00000571409 PRPF40BQ6NWY9 871 aaKnown RBP39.55■■■■□ 3.92
CTDNEP1-206ENST00000571409 KLRG2A4D1S0 409 aaPredicted RBP39.54■■■■□ 3.92
CTDNEP1-206ENST00000571409 PRELPP51888 382 aa39.54■■■■□ 3.92
CTDNEP1-206ENST00000571409 UBN2Q6ZU65 1347 aa39.54■■■■□ 3.92
CTDNEP1-206ENST00000571409 NPR1P16066 1061 aa39.53■■■■□ 3.92
CTDNEP1-206ENST00000571409 NUTM1Q86Y26 1132 aa39.52■■■■□ 3.92
CTDNEP1-206ENST00000571409 ZNF34Q8IZ26 560 aa39.52■■■■□ 3.92
CTDNEP1-206ENST00000571409 FER1L6Q2WGJ9 1857 aa39.51■■■■□ 3.92
CTDNEP1-206ENST00000571409 CCDC88AQ3V6T2 1871 aa39.51■■■■□ 3.92
CTDNEP1-206ENST00000571409 TNRC6CQ9HCJ0 1690 aaKnown RBP39.51■■■■□ 3.92
CTDNEP1-206ENST00000571409 MBIPQ9NS73 344 aa39.51■■■■□ 3.92
CTDNEP1-206ENST00000571409 ABCC12Q96J65 1359 aa39.5■■■■□ 3.91
CTDNEP1-206ENST00000571409 IBTKQ9P2D0 1353 aaPredicted RBP39.5■■■■□ 3.91
CTDNEP1-206ENST00000571409 ANP32CO43423 234 aa39.5■■■■□ 3.91
CTDNEP1-206ENST00000571409 NMRK2Q9NPI5 230 aa39.5■■■■□ 3.91
CTDNEP1-206ENST00000571409 DDX21Q9NR30 783 aaKnown RBP eCLIP39.5■■■■□ 3.91
CTDNEP1-206ENST00000571409 HOXB7P09629 217 aa39.49■■■■□ 3.91
CTDNEP1-206ENST00000571409 AIMP1Q12904 312 aaKnown RBP39.49■■■■□ 3.91
CTDNEP1-206ENST00000571409 ERFEQ4G0M1 354 aa39.49■■■■□ 3.91
CTDNEP1-206ENST00000571409 SUSD4Q5VX71 490 aa39.49■■■■□ 3.91
CTDNEP1-206ENST00000571409 COPS6Q7L5N1 327 aa39.49■■■■□ 3.91
CTDNEP1-206ENST00000571409 ZNF853P0CG23 659 aa39.48■■■■□ 3.91
CTDNEP1-206ENST00000571409 CALD1Q05682 793 aaKnown RBP39.48■■■■□ 3.91
CTDNEP1-206ENST00000571409 HDGFL1Q5TGJ6 251 aa39.48■■■■□ 3.91
CTDNEP1-206ENST00000571409 XAGE3Q8WTP9 111 aa39.48■■■■□ 3.91
CTDNEP1-206ENST00000571409 TIAM2Q8IVF5 1701 aa39.48■■■■□ 3.91
CTDNEP1-206ENST00000571409 IFT57Q9NWB7 429 aa39.47■■■■□ 3.91
CTDNEP1-206ENST00000571409 CHPF2Q9P2E5 772 aa39.47■■■■□ 3.91
CTDNEP1-206ENST00000571409 KDM2BQ8NHM5 1336 aa39.46■■■■□ 3.91
CTDNEP1-206ENST00000571409 ZC3H4Q9UPT8 1303 aaKnown RBP39.46■■■■□ 3.91
CTDNEP1-206ENST00000571409 GNAI1P63096 354 aa39.45■■■■□ 3.91
CTDNEP1-206ENST00000571409 SOGA3Q5TF21 947 aa39.45■■■■□ 3.91
CTDNEP1-206ENST00000571409 NTSR2O95665 410 aa39.44■■■■□ 3.9
CTDNEP1-206ENST00000571409 PARP10Q53GL7 1025 aa39.44■■■■□ 3.9
CTDNEP1-206ENST00000571409 DUSP27Q5VZP5 1158 aa39.44■■■■□ 3.9
CTDNEP1-206ENST00000571409 PPP1R42Q7Z4L9 355 aa39.44■■■■□ 3.9
CTDNEP1-206ENST00000571409 ANKRD36CQ5JPF3 1778 aa39.44■■■■□ 3.9
CTDNEP1-206ENST00000571409 MRS2Q9HD23 443 aa39.43■■■■□ 3.9
CTDNEP1-206ENST00000571409 LTBP3Q9NS15 1303 aa39.42■■■■□ 3.9
CTDNEP1-206ENST00000571409 RIC1Q4ADV7 1423 aa39.42■■■■□ 3.9
CTDNEP1-206ENST00000571409 TAOK3Q9H2K8 898 aa39.42■■■■□ 3.9
CTDNEP1-206ENST00000571409 CRY2Q49AN0 593 aa39.41■■■■□ 3.9
CTDNEP1-206ENST00000571409 C7orf43Q8WVR3 580 aa39.41■■■■□ 3.9
CTDNEP1-206ENST00000571409 ALDH1B1P30837 517 aa39.4■■■■□ 3.9
CTDNEP1-206ENST00000571409 DBF4Q9UBU7 674 aaPredicted RBP39.4■■■■□ 3.9
CTDNEP1-206ENST00000571409 HSP90AB3PQ58FF7 597 aa39.39■■■■□ 3.9
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms