RNA–Protein interactions for RNA: ENST00000568945.2

MKRN3-204, Transcript of makorin ring finger protein 3, humanhuman

TSL 4

Gene MKRN3, Length 2,740 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN3-204ENST00000568945 COL6A1P12109 1028 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 KCNV1Q6PIU1 500 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 VEZTQ9HBM0 779 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
MKRN3-204ENST00000568945 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 BLOC1S6Q9UL45 172 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.88□□□□□ -0.51
MKRN3-204ENST00000568945 RNASEH2AO75792 299 aaKnown RBP11.88□□□□□ -0.51
MKRN3-204ENST00000568945 SESN3P58005 492 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 RECKO95980 971 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 ENPP1P22413 925 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 ZBED6P86452 979 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 DDB1Q16531 1140 aa11.88□□□□□ -0.51
MKRN3-204ENST00000568945 LMBRD2Q68DH5 695 aaPredicted RBP11.88□□□□□ -0.51
MKRN3-204ENST00000568945 U3KPZ7 1027 aaPredicted RBP11.88□□□□□ -0.51
MKRN3-204ENST00000568945 DYNC1I1O14576 645 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 HOXD10P28358 340 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 LZTS1Q9Y250 596 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 ANKRD45Q5TZF3 282 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 NFXL1Q6ZNB6 911 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 ZNF771Q7L3S4 317 aaPredicted RBP11.87□□□□□ -0.51
MKRN3-204ENST00000568945 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
MKRN3-204ENST00000568945 ALKBH2Q6NS38 261 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 GABPB2Q8TAK5 448 aaPredicted RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 CUEDC1Q9NWM3 386 aaPredicted RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 SYNE3Q6ZMZ3 975 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 RMDN2Q96LZ7 410 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
MKRN3-204ENST00000568945 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
MKRN3-204ENST00000568945 ERCC5P28715 1186 aaPredicted RBP11.85□□□□□ -0.51
MKRN3-204ENST00000568945 TRAF1Q13077 416 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 FILIP1LQ4L180 1135 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 AGAP9Q5VTM2 703 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 PRPF4BQ13523 1007 aaKnown RBP11.85□□□□□ -0.51
MKRN3-204ENST00000568945 C10orf62Q5T681 223 aaPredicted RBP11.85□□□□□ -0.51
MKRN3-204ENST00000568945 PDXDC1Q6P996 788 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 CHPFQ8IZ52 775 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 MYOCDQ8IZQ8 938 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 MIGA1Q8NAN2 632 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 HELQQ8TDG4 1101 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 SLC39A13Q96H72 371 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 BRINP2Q9C0B6 783 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 DEF6Q9H4E7 631 aa11.85□□□□□ -0.51
MKRN3-204ENST00000568945 DMGDHQ9UI17 866 aaKnown RBP11.85□□□□□ -0.51
MKRN3-204ENST00000568945 VAMP4O75379 141 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 FOSP01100 380 aaPredicted RBP11.84□□□□□ -0.51
MKRN3-204ENST00000568945 MMEP08473 750 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 TOMM20Q15388 145 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 COBLL1Q53SF7 1204 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 TRIM11Q96F44 468 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
MKRN3-204ENST00000568945 BBOX1O75936 387 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 SMARCA1P28370 1054 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 WWC2Q6AWC2 1192 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
MKRN3-204ENST00000568945 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
MKRN3-204ENST00000568945 SH3BGRP55822 239 aaPredicted RBP11.83□□□□□ -0.52
MKRN3-204ENST00000568945 IRX1P78414 480 aaPredicted RBP11.83□□□□□ -0.52
MKRN3-204ENST00000568945 NPHP1O15259 732 aa11.83□□□□□ -0.52
MKRN3-204ENST00000568945 MSL3P1P0C860 447 aa11.83□□□□□ -0.52
MKRN3-204ENST00000568945 TAF11Q15544 211 aa11.83□□□□□ -0.52
MKRN3-204ENST00000568945 CCDC178Q5BJE1 867 aa11.83□□□□□ -0.52
MKRN3-204ENST00000568945 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
MKRN3-204ENST00000568945 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
MKRN3-204ENST00000568945 UNC45AQ9H3U1 944 aa11.83□□□□□ -0.52
MKRN3-204ENST00000568945 IFRD1O00458 451 aaPredicted RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 CHL1O00533 1208 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 GSCP56915 257 aaPredicted RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 SYCP2LQ5T4T6 812 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 JAZF1Q86VZ6 243 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 MYLK4Q86YV6 388 aaPredicted RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 TATDN2Q93075 761 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 PBXIP1Q96AQ6 731 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 GBP4Q96PP9 640 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 FEZ1Q99689 392 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 XPO4Q9C0E2 1151 aaKnown RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 POLG2Q9UHN1 485 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 TTF2Q9UNY4 1162 aaKnown RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 KRT38O76015 456 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 RBM6P78332 1123 aaKnown RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 ARL10Q8N8L6 244 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 CHST12Q9NRB3 414 aa11.82□□□□□ -0.52
MKRN3-204ENST00000568945 CWC15Q9P013 229 aaKnown RBP11.82□□□□□ -0.52
MKRN3-204ENST00000568945 TSPAN7P41732 249 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms