RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 RPS6KA4O75676 772 aa13.88□□□□□ -0.19
LINC00564-201ENST00000567258 MTHFSDQ2M296 383 aaKnown RBP13.88□□□□□ -0.19
LINC00564-201ENST00000567258 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
LINC00564-201ENST00000567258 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
LINC00564-201ENST00000567258 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
LINC00564-201ENST00000567258 MMP10P09238 476 aa13.87□□□□□ -0.19
LINC00564-201ENST00000567258 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
LINC00564-201ENST00000567258 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
LINC00564-201ENST00000567258 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
LINC00564-201ENST00000567258 SLC4A9Q96Q91 983 aa13.87□□□□□ -0.19
LINC00564-201ENST00000567258 C4AP0C0L4 1744 aa13.87□□□□□ -0.19
LINC00564-201ENST00000567258 UTRNP46939 3433 aa13.86□□□□□ -0.19
LINC00564-201ENST00000567258 GNAT3A8MTJ3 354 aa13.86□□□□□ -0.19
LINC00564-201ENST00000567258 TEFQ10587 303 aa13.86□□□□□ -0.19
LINC00564-201ENST00000567258 ZNF784Q8NCA9 323 aaPredicted RBP13.86□□□□□ -0.19
LINC00564-201ENST00000567258 TJP1Q07157 1748 aa13.86□□□□□ -0.19
LINC00564-201ENST00000567258 ARSIQ5FYB1 569 aa13.85□□□□□ -0.19
LINC00564-201ENST00000567258 PARP3Q9Y6F1 533 aa13.85□□□□□ -0.19
LINC00564-201ENST00000567258 CICQ96RK0 1608 aaPredicted RBP13.85□□□□□ -0.19
LINC00564-201ENST00000567258 ZPR1O75312 459 aa13.84□□□□□ -0.19
LINC00564-201ENST00000567258 NEFMP07197 916 aa13.84□□□□□ -0.19
LINC00564-201ENST00000567258 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
LINC00564-201ENST00000567258 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
LINC00564-201ENST00000567258 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
LINC00564-201ENST00000567258 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.19
LINC00564-201ENST00000567258 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.2
LINC00564-201ENST00000567258 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.2
LINC00564-201ENST00000567258 MRC1P22897 1456 aa13.83□□□□□ -0.2
LINC00564-201ENST00000567258 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
LINC00564-201ENST00000567258 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC00564-201ENST00000567258 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC00564-201ENST00000567258 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
LINC00564-201ENST00000567258 GYS1P13807 737 aa13.82□□□□□ -0.2
LINC00564-201ENST00000567258 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
LINC00564-201ENST00000567258 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
LINC00564-201ENST00000567258 NPM2Q86SE8 214 aaKnown RBP13.82□□□□□ -0.2
LINC00564-201ENST00000567258 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
LINC00564-201ENST00000567258 STARD3NLO95772 234 aa13.81□□□□□ -0.2
LINC00564-201ENST00000567258 TGFB2P61812 414 aa13.81□□□□□ -0.2
LINC00564-201ENST00000567258 VSIG10Q8N0Z9 540 aa13.81□□□□□ -0.2
LINC00564-201ENST00000567258 RTF1Q92541 710 aaKnown RBP13.81□□□□□ -0.2
LINC00564-201ENST00000567258 WWC3Q9ULE0 1092 aa13.81□□□□□ -0.2
LINC00564-201ENST00000567258 SIPA1L3O60292 1781 aaPredicted RBP13.81□□□□□ -0.2
LINC00564-201ENST00000567258 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
LINC00564-201ENST00000567258 USP42Q9H9J4 1324 aaKnown RBP13.8□□□□□ -0.2
LINC00564-201ENST00000567258 FCHSD2O94868 740 aa13.79□□□□□ -0.2
LINC00564-201ENST00000567258 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
LINC00564-201ENST00000567258 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
LINC00564-201ENST00000567258 KCPQ6ZWJ8 1503 aa13.79□□□□□ -0.2
LINC00564-201ENST00000567258 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
LINC00564-201ENST00000567258 KHSRPQ92945 711 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC00564-201ENST00000567258 RSPH6AQ9H0K4 717 aa13.78□□□□□ -0.2
LINC00564-201ENST00000567258 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
LINC00564-201ENST00000567258 A0A087WZG4 1122 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 A0A0G2JLW4 131 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 BTBD11A6QL63 1104 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
LINC00564-201ENST00000567258 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
LINC00564-201ENST00000567258 COL15A1P39059 1388 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 PNNQ9H307 717 aaKnown RBP13.77□□□□□ -0.21
LINC00564-201ENST00000567258 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
LINC00564-201ENST00000567258 DLG5Q8TDM6 1919 aa13.76□□□□□ -0.21
LINC00564-201ENST00000567258 C10orf71Q711Q0 1435 aa13.76□□□□□ -0.21
LINC00564-201ENST00000567258 SOS1Q07889 1333 aaPredicted RBP13.76□□□□□ -0.21
LINC00564-201ENST00000567258 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
LINC00564-201ENST00000567258 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
LINC00564-201ENST00000567258 NARFQ9UHQ1 456 aa13.76□□□□□ -0.21
LINC00564-201ENST00000567258 ZNF330Q9Y3S2 320 aaPredicted RBP13.76□□□□□ -0.21
LINC00564-201ENST00000567258 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
LINC00564-201ENST00000567258 AFDNP55196 1824 aaKnown RBP13.76□□□□□ -0.21
LINC00564-201ENST00000567258 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
LINC00564-201ENST00000567258 HEG1Q9ULI3 1381 aa13.75□□□□□ -0.21
LINC00564-201ENST00000567258 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
LINC00564-201ENST00000567258 ZBTB1Q9Y2K1 713 aa13.75□□□□□ -0.21
LINC00564-201ENST00000567258 ARFGEF1Q9Y6D6 1849 aa13.75□□□□□ -0.21
LINC00564-201ENST00000567258 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
LINC00564-201ENST00000567258 DPEP1P16444 411 aa13.74□□□□□ -0.21
LINC00564-201ENST00000567258 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
LINC00564-201ENST00000567258 GPBP1L1Q9HC44 474 aaPredicted RBP13.74□□□□□ -0.21
LINC00564-201ENST00000567258 PIM2Q9P1W9 311 aa13.74□□□□□ -0.21
LINC00564-201ENST00000567258 CEMIPQ8WUJ3 1361 aa13.73□□□□□ -0.21
LINC00564-201ENST00000567258 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
LINC00564-201ENST00000567258 ARHGAP27Q6ZUM4 889 aa13.73□□□□□ -0.21
LINC00564-201ENST00000567258 MAPK8IP3Q9UPT6 1336 aa13.72□□□□□ -0.21
LINC00564-201ENST00000567258 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
LINC00564-201ENST00000567258 NPHP1O15259 732 aa13.72□□□□□ -0.21
LINC00564-201ENST00000567258 TM4SF1P30408 202 aa13.72□□□□□ -0.21
LINC00564-201ENST00000567258 C1QTNF8P60827 252 aa13.72□□□□□ -0.21
LINC00564-201ENST00000567258 MCM10Q7L590 875 aa13.72□□□□□ -0.21
LINC00564-201ENST00000567258 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
LINC00564-201ENST00000567258 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.21
LINC00564-201ENST00000567258 DDR1Q08345 913 aa13.71□□□□□ -0.21
LINC00564-201ENST00000567258 DALRD3Q5D0E6 543 aaKnown RBP13.71□□□□□ -0.21
LINC00564-201ENST00000567258 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.21
LINC00564-201ENST00000567258 ZNF526Q8TF50 670 aaPredicted RBP13.71□□□□□ -0.21
LINC00564-201ENST00000567258 SERPINB2P05120 415 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms