RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 ZNF592Q92610 1267 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 POTEB2H3BUK9 544 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 BANK1Q8NDB2 785 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 OGFRQ9NZT2 677 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 SHTN1A0MZ66 631 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 RXRBP28702 533 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 MBIPQ9NS73 344 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 AGLP35573 1532 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 PHACTR3Q96KR7 559 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 MAP3K2Q9Y2U5 619 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 DNAAF4Q8WXU2 420 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 RFC4P35249 363 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 CBX1P83916 185 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 TPD52L1Q16890 204 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-211ENST00000567188 HOMER1Q86YM7 354 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 TNNQ9UQP3 1299 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 PRIM1P49642 420 aaKnown RBP7.06□□□□□ -1.28
CNOT1-211ENST00000567188 TMCO3Q6UWJ1 677 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 NOL10Q9BSC4 688 aaKnown RBP7.06□□□□□ -1.28
CNOT1-211ENST00000567188 CHPF2Q9P2E5 772 aa7.06□□□□□ -1.28
CNOT1-211ENST00000567188 SMARCA5O60264 1052 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-211ENST00000567188 IP6K1Q92551 441 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 EFCC1Q9HA90 598 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 SH3BGRP55822 239 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-211ENST00000567188 CNNM1Q9NRU3 951 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 V9GYY5 206 aaPredicted RBP7.05□□□□□ -1.28
CNOT1-211ENST00000567188 DDX58O95786 925 aaKnown RBP7.05□□□□□ -1.28
CNOT1-211ENST00000567188 FOSBP53539 338 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 IFNL2Q8IZJ0 200 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 RUFY2Q8WXA3 655 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 NALCNQ8IZF0 1738 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 GOLGA6L9A6NEM1 432 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 KCNQ3O43525 872 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 RBM25P49756 843 aaKnown RBP7.05□□□□□ -1.28
CNOT1-211ENST00000567188 SIRT1Q96EB6 747 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 TFCP2L1Q9NZI6 479 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 SWAP70Q9UH65 585 aa7.05□□□□□ -1.28
CNOT1-211ENST00000567188 RNMTO43148 476 aaKnown RBP7.04□□□□□ -1.28
CNOT1-211ENST00000567188 FMNL3Q8IVF7 1028 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 MIPOL1Q8TD10 442 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 PRAMEF22A3QJZ6 481 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 NEMFO60524 1076 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 MCM4P33991 863 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 BRMS1Q9HCU9 246 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 MCM3P25205 808 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 ADAMTSL3P82987 1691 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 MARCH6O60337 910 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 MCM2P49736 904 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 TAF7Q15545 349 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-211ENST00000567188 TEX2Q8IWB9 1127 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 CPS1P31327 1500 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-211ENST00000567188 FCHSD2O94868 740 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 RBM5P52756 815 aaKnown RBP eCLIP7.04□□□□□ -1.28
CNOT1-211ENST00000567188 TTC39AQ5SRH9 613 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 WDR66Q8TBY9 1149 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
CNOT1-211ENST00000567188 API5Q9BZZ5 524 aaKnown RBP7.04□□□□□ -1.28
CNOT1-211ENST00000567188 A0A1B0GUA9 196 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 SPDYE4A6NLX3 237 aa7.04□□□□□ -1.28
CNOT1-211ENST00000567188 USP6P35125 1406 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 FAM135BQ49AJ0 1406 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 GOLGA6L10A0A0M3HER8 536 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 IL13P35225 146 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 DZIP1LQ8IYY4 767 aaKnown RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 PRDM10Q9NQV6 1147 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 PCDH11XQ9BZA7 1347 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 PCDH11YQ9BZA8 1340 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 C20orf194Q5TEA3 1177 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 CEP120Q8N960 986 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 TMEM87AQ8NBN3 555 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 PNISRQ8TF01 805 aaKnown RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 NAT10Q9H0A0 1025 aaKnown RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 TBC1D2BQ9UPU7 963 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 ZFYVE9O95405 1425 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 TTC31Q49AM3 519 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 TOMM22Q9NS69 142 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 SETBP1Q9Y6X0 1596 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 ARHGAP31Q2M1Z3 1444 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 FOXD4L5Q5VV16 416 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 FOXD4L4Q8WXT5 416 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 SEPT11Q9NVA2 429 aaKnown RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 GNPATO15228 680 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 SLC4A3P48751 1232 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 TSR1Q2NL82 804 aaKnown RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 ZNF142P52746 1687 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 STARD3NLO95772 234 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 UBTFL1P0CB47 393 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-211ENST00000567188 UVSSAQ2YD98 709 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 PAXBP1Q9Y5B6 917 aa7.03□□□□□ -1.28
CNOT1-211ENST00000567188 HSP90AB4PQ58FF6 505 aa7.02□□□□□ -1.28
CNOT1-211ENST00000567188 HOOK1Q9UJC3 728 aaKnown RBP7.02□□□□□ -1.28
CNOT1-211ENST00000567188 MAP3K5Q99683 1374 aa7.02□□□□□ -1.28
CNOT1-211ENST00000567188 LUZP1Q86V48 1076 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 AXIN2Q9Y2T1 843 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 JAG2Q9Y219 1238 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 VWDEQ8N2E2 1590 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 ARHGEF10O15013 1369 aa7.02□□□□□ -1.29
CNOT1-211ENST00000567188 NOP2P46087 812 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms