RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
HERPUD1-210ENST00000565966 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
HERPUD1-210ENST00000565966 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
HERPUD1-210ENST00000565966 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.46
HERPUD1-210ENST00000565966 PDIA6Q15084 440 aa17.95■□□□□ 0.46
HERPUD1-210ENST00000565966 IL16Q14005 1332 aa17.95■□□□□ 0.46
HERPUD1-210ENST00000565966 ERVV-1B6SEH8 477 aa17.94■□□□□ 0.46
HERPUD1-210ENST00000565966 DPEP1P16444 411 aa17.94■□□□□ 0.46
HERPUD1-210ENST00000565966 KIF6Q6ZMV9 814 aa17.94■□□□□ 0.46
HERPUD1-210ENST00000565966 WDR63Q8IWG1 891 aa17.94■□□□□ 0.46
HERPUD1-210ENST00000565966 MAP3K15Q6ZN16 1313 aa17.94■□□□□ 0.46
HERPUD1-210ENST00000565966 HLFQ16534 295 aa17.93■□□□□ 0.46
HERPUD1-210ENST00000565966 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
HERPUD1-210ENST00000565966 TTLL7Q6ZT98 887 aa17.93■□□□□ 0.46
HERPUD1-210ENST00000565966 NECTIN2Q92692 538 aa17.93■□□□□ 0.46
HERPUD1-210ENST00000565966 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
HERPUD1-210ENST00000565966 HDGFL1Q5TGJ6 251 aa17.92■□□□□ 0.46
HERPUD1-210ENST00000565966 LRP10Q7Z4F1 713 aa17.92■□□□□ 0.46
HERPUD1-210ENST00000565966 DDX21Q9NR30 783 aaKnown RBP eCLIP17.92■□□□□ 0.46
HERPUD1-210ENST00000565966 ARFGEF1Q9Y6D6 1849 aa17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 ANXA1P04083 346 aa17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 KCNA3P22001 575 aa17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 PRR5LQ6MZQ0 368 aa17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 TSR2Q969E8 191 aaKnown RBP17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
HERPUD1-210ENST00000565966 DLEC1Q9Y238 1755 aa17.9■□□□□ 0.46
HERPUD1-210ENST00000565966 NPHP1O15259 732 aa17.9■□□□□ 0.46
HERPUD1-210ENST00000565966 YY1P25490 414 aa17.9■□□□□ 0.46
HERPUD1-210ENST00000565966 PIM2Q9P1W9 311 aa17.9■□□□□ 0.46
HERPUD1-210ENST00000565966 DBF4Q9UBU7 674 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-210ENST00000565966 ZNF521Q96K83 1311 aa17.9■□□□□ 0.46
HERPUD1-210ENST00000565966 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 CHRNA5P30532 468 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 GIGYF2Q6Y7W6 1299 aaKnown RBP17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 COPS6Q7L5N1 327 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 NBPF5PQ86XG9 351 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 C8orf58Q8NAV2 365 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 BRIP1Q9BX63 1249 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 CHMP4AQ9BY43 222 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 ZBTB3Q9H5J0 574 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 CHPF2Q9P2E5 772 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
HERPUD1-210ENST00000565966 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
HERPUD1-210ENST00000565966 PDE6BP35913 854 aa17.88■□□□□ 0.45
HERPUD1-210ENST00000565966 ST5P78524 1137 aa17.88■□□□□ 0.45
HERPUD1-210ENST00000565966 TPTE2Q6XPS3 522 aa17.88■□□□□ 0.45
HERPUD1-210ENST00000565966 ANKRD36CQ5JPF3 1778 aa17.87■□□□□ 0.45
HERPUD1-210ENST00000565966 H0YIN7 160 aa17.87■□□□□ 0.45
HERPUD1-210ENST00000565966 AIMP1Q12904 312 aaKnown RBP17.87■□□□□ 0.45
HERPUD1-210ENST00000565966 XAGE3Q8WTP9 111 aa17.87■□□□□ 0.45
HERPUD1-210ENST00000565966 FANCIQ9NVI1 1328 aa17.87■□□□□ 0.45
HERPUD1-210ENST00000565966 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
HERPUD1-210ENST00000565966 DALRD3Q5D0E6 543 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-210ENST00000565966 C2CD5Q86YS7 1000 aa17.86■□□□□ 0.45
HERPUD1-210ENST00000565966 ZNF34Q8IZ26 560 aa17.86■□□□□ 0.45
HERPUD1-210ENST00000565966 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
HERPUD1-210ENST00000565966 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
HERPUD1-210ENST00000565966 HYPKQ9NX55 129 aa17.86■□□□□ 0.45
HERPUD1-210ENST00000565966 FAM177BA6PVY3 158 aa17.85■□□□□ 0.45
HERPUD1-210ENST00000565966 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
HERPUD1-210ENST00000565966 GPTP24298 496 aa17.84■□□□□ 0.45
HERPUD1-210ENST00000565966 GTF2E1P29083 439 aaPredicted RBP17.84■□□□□ 0.45
HERPUD1-210ENST00000565966 HSP90AB3PQ58FF7 597 aa17.84■□□□□ 0.45
HERPUD1-210ENST00000565966 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
HERPUD1-210ENST00000565966 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
HERPUD1-210ENST00000565966 GOLGA2Q08379 1002 aa17.83■□□□□ 0.44
HERPUD1-210ENST00000565966 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
HERPUD1-210ENST00000565966 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.44
HERPUD1-210ENST00000565966 COL11A2P13942 1736 aaPredicted RBP17.83■□□□□ 0.44
HERPUD1-210ENST00000565966 UBN2Q6ZU65 1347 aa17.82■□□□□ 0.44
HERPUD1-210ENST00000565966 TWISTNBQ3B726 338 aaPredicted RBP17.82■□□□□ 0.44
HERPUD1-210ENST00000565966 PARP10Q53GL7 1025 aa17.82■□□□□ 0.44
HERPUD1-210ENST00000565966 PPP1R42Q7Z4L9 355 aa17.82■□□□□ 0.44
HERPUD1-210ENST00000565966 TTLL6Q8N841 843 aa17.82■□□□□ 0.44
HERPUD1-210ENST00000565966 PLBD2Q8NHP8 589 aa17.82■□□□□ 0.44
HERPUD1-210ENST00000565966 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.446e-11■□□□□ 10.9
HERPUD1-210ENST00000565966 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-210ENST00000565966 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
HERPUD1-210ENST00000565966 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
HERPUD1-210ENST00000565966 SUSD4Q5VX71 490 aa17.81■□□□□ 0.44
HERPUD1-210ENST00000565966 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
HERPUD1-210ENST00000565966 SBF1O95248 1867 aa17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 KLRG2A4D1S0 409 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 SRGNP10124 158 aa17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 ARHGAP27Q6ZUM4 889 aa17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
HERPUD1-210ENST00000565966 STYK1Q6J9G0 422 aa17.79■□□□□ 0.44
HERPUD1-210ENST00000565966 NUTM1Q86Y26 1132 aa17.79■□□□□ 0.44
HERPUD1-210ENST00000565966 CNKSR1Q969H4 720 aa17.79■□□□□ 0.44
HERPUD1-210ENST00000565966 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
HERPUD1-210ENST00000565966 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
HERPUD1-210ENST00000565966 E9PSI1 815 aa17.78■□□□□ 0.44
HERPUD1-210ENST00000565966 VAMP4O75379 141 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms