RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 MYD88Q99836 296 aa24.07■■□□□ 1.44
PKD1-230ENST00000565639 QTRT2Q9H974 415 aaKnown RBP24.07■■□□□ 1.44
PKD1-230ENST00000565639 GRM8O00222 908 aa24.06■■□□□ 1.44
PKD1-230ENST00000565639 KCNQ2O43526 872 aa24.05■■□□□ 1.44
PKD1-230ENST00000565639 ANKRD45Q5TZF3 282 aa24.05■■□□□ 1.44
PKD1-230ENST00000565639 TTLL7Q6ZT98 887 aa24.05■■□□□ 1.44
PKD1-230ENST00000565639 NUP188Q5SRE5 1749 aa24.05■■□□□ 1.44
PKD1-230ENST00000565639 PALLDQ8WX93 1383 aa24.05■■□□□ 1.44
PKD1-230ENST00000565639 PDE4AP27815 886 aa24.04■■□□□ 1.44
PKD1-230ENST00000565639 GCKRQ14397 625 aa24.04■■□□□ 1.44
PKD1-230ENST00000565639 LOC102724428A0A0B4J2F2 783 aa24.03■■□□□ 1.44
PKD1-230ENST00000565639 SIK1P57059 783 aa24.03■■□□□ 1.44
PKD1-230ENST00000565639 SSH3Q8TE77 659 aa24.03■■□□□ 1.44
PKD1-230ENST00000565639 LNPKQ9C0E8 428 aa24.03■■□□□ 1.44
PKD1-230ENST00000565639 ZNF831Q5JPB2 1677 aa24.02■■□□□ 1.44
PKD1-230ENST00000565639 PNMA6EA0A0J9YXQ4 647 aa24.02■■□□□ 1.44
PKD1-230ENST00000565639 MTX1Q13505 466 aa24.02■■□□□ 1.44
PKD1-230ENST00000565639 SEPT12Q8IYM1 358 aa24.02■■□□□ 1.44
PKD1-230ENST00000565639 BACH2Q9BYV9 841 aa24.02■■□□□ 1.44
PKD1-230ENST00000565639 RBM19Q9Y4C8 960 aaKnown RBP24.02■■□□□ 1.43
PKD1-230ENST00000565639 NHSQ6T4R5 1651 aa24.01■■□□□ 1.43
PKD1-230ENST00000565639 ATP6V1AP38606 617 aa24.01■■□□□ 1.43
PKD1-230ENST00000565639 POLA2Q14181 598 aa24■■□□□ 1.43
PKD1-230ENST00000565639 FAM161AQ3B820 660 aa24■■□□□ 1.43
PKD1-230ENST00000565639 AFDNP55196 1824 aaKnown RBP24■■□□□ 1.43
PKD1-230ENST00000565639 IL6STP40189 918 aaPredicted RBP24■■□□□ 1.43
PKD1-230ENST00000565639 KIF6Q6ZMV9 814 aa24■■□□□ 1.43
PKD1-230ENST00000565639 PPP1R42Q7Z4L9 355 aa24■■□□□ 1.43
PKD1-230ENST00000565639 ZBTB47Q9UFB7 747 aaPredicted RBP24■■□□□ 1.43
PKD1-230ENST00000565639 ZBTB1Q9Y2K1 713 aa23.99■■□□□ 1.43
PKD1-230ENST00000565639 ZBTB3Q9H5J0 574 aa23.98■■□□□ 1.43
PKD1-230ENST00000565639 COL15A1P39059 1388 aa23.98■■□□□ 1.43
PKD1-230ENST00000565639 RREB1Q92766 1687 aa23.98■■□□□ 1.43
PKD1-230ENST00000565639 CCDC87Q9NVE4 849 aa23.97■■□□□ 1.43
PKD1-230ENST00000565639 ATP5J2-PTCD1G3V325 749 aa23.96■■□□□ 1.43
PKD1-230ENST00000565639 SRGAP3O43295 1099 aa23.96■■□□□ 1.43
PKD1-230ENST00000565639 CCDC191Q8NCU4 936 aa23.96■■□□□ 1.43
PKD1-230ENST00000565639 SUCLG2Q96I99 432 aa23.96■■□□□ 1.43
PKD1-230ENST00000565639 ZNF330Q9Y3S2 320 aaPredicted RBP23.96■■□□□ 1.43
PKD1-230ENST00000565639 MAP3K15Q6ZN16 1313 aa23.96■■□□□ 1.43
PKD1-230ENST00000565639 ITPK1Q13572 414 aa23.96■■□□□ 1.43
PKD1-230ENST00000565639 ZNF772Q68DY9 489 aaPredicted RBP23.96■■□□□ 1.43
PKD1-230ENST00000565639 TCIRG1Q13488 830 aa23.95■■□□□ 1.42
PKD1-230ENST00000565639 C8orf34Q49A92 452 aa23.95■■□□□ 1.42
PKD1-230ENST00000565639 INTS5Q6P9B9 1019 aaKnown RBP23.95■■□□□ 1.42
PKD1-230ENST00000565639 KAZALD1Q96I82 304 aa23.95■■□□□ 1.42
PKD1-230ENST00000565639 CWC25Q9NXE8 425 aaPredicted RBP23.95■■□□□ 1.42
PKD1-230ENST00000565639 BTAF1O14981 1849 aa23.95■■□□□ 1.42
PKD1-230ENST00000565639 CRKLP46109 303 aaKnown RBP23.94■■□□□ 1.42
PKD1-230ENST00000565639 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
PKD1-230ENST00000565639 NPM2Q86SE8 214 aaKnown RBP23.94■■□□□ 1.42
PKD1-230ENST00000565639 ISCA1Q9BUE6 129 aa23.94■■□□□ 1.42
PKD1-230ENST00000565639 A0A087WZG4 1122 aa23.94■■□□□ 1.42
PKD1-230ENST00000565639 EXOC6BQ9Y2D4 811 aa23.94■■□□□ 1.42
PKD1-230ENST00000565639 SBF2Q86WG5 1849 aa23.94■■□□□ 1.42
PKD1-230ENST00000565639 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
PKD1-230ENST00000565639 EIF5P55010 431 aaKnown RBP23.93■■□□□ 1.42
PKD1-230ENST00000565639 GIGYF2Q6Y7W6 1299 aaKnown RBP23.93■■□□□ 1.42
PKD1-230ENST00000565639 ERVV-1B6SEH8 477 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 H7C1W4 665 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 RAB11FIP3O75154 756 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 CASP7P55210 303 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 FAM182BQ5T319 152 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 BICC1Q9H694 974 aaKnown RBP23.92■■□□□ 1.42
PKD1-230ENST00000565639 HSP90AB3PQ58FF7 597 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 LRRCC1Q9C099 1032 aa23.92■■□□□ 1.42
PKD1-230ENST00000565639 HSP90AB4PQ58FF6 505 aa23.91■■□□□ 1.42
PKD1-230ENST00000565639 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
PKD1-230ENST00000565639 UBE3BQ7Z3V4 1068 aa23.91■■□□□ 1.42
PKD1-230ENST00000565639 NOP58Q9Y2X3 529 aaKnown RBP23.91■■□□□ 1.42
PKD1-230ENST00000565639 RBM6P78332 1123 aaKnown RBP23.9■■□□□ 1.42
PKD1-230ENST00000565639 MYH14Q7Z406 1995 aaKnown RBP23.89■■□□□ 1.42
PKD1-230ENST00000565639 APBB1O00213 710 aa23.89■■□□□ 1.42
PKD1-230ENST00000565639 SURF6O75683 361 aaKnown RBP23.89■■□□□ 1.42
PKD1-230ENST00000565639 DZIP3Q86Y13 1208 aaKnown RBP23.89■■□□□ 1.42
PKD1-230ENST00000565639 RABL6Q3YEC7 729 aaPredicted RBP23.89■■□□□ 1.41
PKD1-230ENST00000565639 PLEKHM2Q8IWE5 1019 aa23.89■■□□□ 1.41
PKD1-230ENST00000565639 SMARCA5O60264 1052 aaPredicted RBP23.88■■□□□ 1.41
PKD1-230ENST00000565639 KRT27Q7Z3Y8 459 aa23.88■■□□□ 1.41
PKD1-230ENST00000565639 ARXQ96QS3 562 aa23.88■■□□□ 1.41
PKD1-230ENST00000565639 BCL11BQ9C0K0 894 aaPredicted RBP23.88■■□□□ 1.41
PKD1-230ENST00000565639 BMP2KLQ5H9B9 411 aa23.87■■□□□ 1.41
PKD1-230ENST00000565639 FAM196AQ6ZSG2 479 aa23.87■■□□□ 1.41
PKD1-230ENST00000565639 ANKRD36CQ5JPF3 1778 aa23.87■■□□□ 1.41
PKD1-230ENST00000565639 CNTNAP4Q9C0A0 1308 aa23.87■■□□□ 1.41
PKD1-230ENST00000565639 BRWD3Q6RI45 1802 aa23.86■■□□□ 1.41
PKD1-230ENST00000565639 HLFQ16534 295 aa23.86■■□□□ 1.41
PKD1-230ENST00000565639 EPHA10Q5JZY3 1008 aa23.86■■□□□ 1.41
PKD1-230ENST00000565639 LINC00116Q8NCU8 138 aa23.86■■□□□ 1.41
PKD1-230ENST00000565639 RC3H1Q5TC82 1133 aaKnown RBP23.85■■□□□ 1.41
PKD1-230ENST00000565639 C16orf71Q8IYS4 520 aaPredicted RBP23.85■■□□□ 1.41
PKD1-230ENST00000565639 KIF1BPQ96EK5 621 aa23.85■■□□□ 1.41
PKD1-230ENST00000565639 TBC1D2BQ9UPU7 963 aa23.85■■□□□ 1.41
PKD1-230ENST00000565639 LY75O60449 1722 aa23.85■■□□□ 1.41
PKD1-230ENST00000565639 NUP98P52948 1817 aa23.85■■□□□ 1.41
PKD1-230ENST00000565639 PCCAP05165 728 aaPredicted RBP23.84■■□□□ 1.41
PKD1-230ENST00000565639 RHPN1Q8TCX5 695 aa23.84■■□□□ 1.41
PKD1-230ENST00000565639 JARID2Q92833 1246 aaPredicted RBP23.84■■□□□ 1.41
PKD1-230ENST00000565639 ERC1Q8IUD2 1116 aa23.83■■□□□ 1.41
PKD1-230ENST00000565639 OSBPL3Q9H4L5 887 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms