RNA–Protein interactions for RNA: ENST00000564870.1

FANCA-216, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-216ENST00000564870 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
FANCA-216ENST00000564870 MASTLQ96GX5 879 aa13.81□□□□□ -0.2
FANCA-216ENST00000564870 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
FANCA-216ENST00000564870 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
FANCA-216ENST00000564870 NBPF5PQ86XG9 351 aaPredicted RBP13.8□□□□□ -0.2
FANCA-216ENST00000564870 COL11A2P13942 1736 aaPredicted RBP13.8□□□□□ -0.2
FANCA-216ENST00000564870 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
FANCA-216ENST00000564870 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
FANCA-216ENST00000564870 BTBD11A6QL63 1104 aa13.79□□□□□ -0.2
FANCA-216ENST00000564870 FOXN1O15353 648 aa13.79□□□□□ -0.2
FANCA-216ENST00000564870 LDHDQ86WU2 507 aa13.79□□□□□ -0.2
FANCA-216ENST00000564870 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
FANCA-216ENST00000564870 TAF1DQ9H5J8 278 aaPredicted RBP13.79□□□□□ -0.2
FANCA-216ENST00000564870 USP16Q9Y5T5 823 aa13.79□□□□□ -0.2
FANCA-216ENST00000564870 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
FANCA-216ENST00000564870 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
FANCA-216ENST00000564870 CCDC93Q567U6 631 aa13.78□□□□□ -0.2
FANCA-216ENST00000564870 EAPPQ56P03 285 aaPredicted RBP13.78□□□□□ -0.2
FANCA-216ENST00000564870 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
FANCA-216ENST00000564870 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
FANCA-216ENST00000564870 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
FANCA-216ENST00000564870 CNTNAP1P78357 1384 aa13.78□□□□□ -0.2
FANCA-216ENST00000564870 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
FANCA-216ENST00000564870 NPR1P16066 1061 aa13.77□□□□□ -0.21
FANCA-216ENST00000564870 VEGFBP49765 207 aa13.77□□□□□ -0.21
FANCA-216ENST00000564870 OLFM4Q6UX06 510 aa13.77□□□□□ -0.21
FANCA-216ENST00000564870 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
FANCA-216ENST00000564870 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
FANCA-216ENST00000564870 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
FANCA-216ENST00000564870 CEMIPQ8WUJ3 1361 aa13.76□□□□□ -0.21
FANCA-216ENST00000564870 ZNF541Q9H0D2 1346 aa13.76□□□□□ -0.21
FANCA-216ENST00000564870 TMEM88BA6NKF7 163 aa13.76□□□□□ -0.21
FANCA-216ENST00000564870 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
FANCA-216ENST00000564870 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
FANCA-216ENST00000564870 FKBP4Q02790 459 aaKnown RBP eCLIP13.76□□□□□ -0.21
FANCA-216ENST00000564870 CLEC4GQ6UXB4 293 aa13.76□□□□□ -0.21
FANCA-216ENST00000564870 CCER1Q8TC90 406 aaPredicted RBP13.76□□□□□ -0.21
FANCA-216ENST00000564870 AIDAQ96BJ3 306 aa13.76□□□□□ -0.21
FANCA-216ENST00000564870 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
FANCA-216ENST00000564870 CTCFP49711 727 aaPredicted RBP13.75□□□□□ -0.21
FANCA-216ENST00000564870 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
FANCA-216ENST00000564870 HACL1Q9UJ83 578 aa13.75□□□□□ -0.21
FANCA-216ENST00000564870 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.21
FANCA-216ENST00000564870 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
FANCA-216ENST00000564870 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
FANCA-216ENST00000564870 TPTE2Q6XPS3 522 aa13.74□□□□□ -0.21
FANCA-216ENST00000564870 KLRG2A4D1S0 409 aaPredicted RBP13.73□□□□□ -0.21
FANCA-216ENST00000564870 NBPF26B4DH59 902 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 EPHX2P34913 555 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 NBPF10Q6P3W6 841 aaKnown RBP13.73□□□□□ -0.21
FANCA-216ENST00000564870 MCM10Q7L590 875 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 RTKN2Q8IZC4 609 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 NBPF15Q8N660 670 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 CACNA1SQ13698 1873 aa13.73□□□□□ -0.21
FANCA-216ENST00000564870 SIPA1L3O60292 1781 aaPredicted RBP13.73□□□□□ -0.21
FANCA-216ENST00000564870 RNF123Q5XPI4 1314 aa13.72□□□□□ -0.21
FANCA-216ENST00000564870 LBX1P52954 281 aa13.72□□□□□ -0.21
FANCA-216ENST00000564870 MAP1SQ66K74 1059 aaPredicted RBP13.72□□□□□ -0.21
FANCA-216ENST00000564870 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
FANCA-216ENST00000564870 SYNE4Q8N205 404 aa13.72□□□□□ -0.21
FANCA-216ENST00000564870 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
FANCA-216ENST00000564870 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
FANCA-216ENST00000564870 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
FANCA-216ENST00000564870 IARSP41252 1262 aaKnown RBP13.71□□□□□ -0.21
FANCA-216ENST00000564870 HLFQ16534 295 aa13.71□□□□□ -0.21
FANCA-216ENST00000564870 PNMA8AQ86V59 439 aaPredicted RBP13.71□□□□□ -0.21
FANCA-216ENST00000564870 SCN4AP35499 1836 aa13.71□□□□□ -0.22
FANCA-216ENST00000564870 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
FANCA-216ENST00000564870 FZD9O00144 591 aa13.7□□□□□ -0.22
FANCA-216ENST00000564870 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
FANCA-216ENST00000564870 DCTN1Q14203 1278 aa13.7□□□□□ -0.22
FANCA-216ENST00000564870 DEFB115Q30KQ5 88 aa13.7□□□□□ -0.22
FANCA-216ENST00000564870 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
FANCA-216ENST00000564870 BCORQ6W2J9 1755 aa13.7□□□□□ -0.22
FANCA-216ENST00000564870 ARFGEF2Q9Y6D5 1785 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 RASSF10A6NK89 507 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
FANCA-216ENST00000564870 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
FANCA-216ENST00000564870 GPC2Q8N158 579 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 NGEFQ8N5V2 710 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 JDP2Q8WYK2 163 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 ABT1Q9ULW3 272 aaKnown RBP13.69□□□□□ -0.22
FANCA-216ENST00000564870 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
FANCA-216ENST00000564870 RGL2O15211 777 aa13.68□□□□□ -0.22
FANCA-216ENST00000564870 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
FANCA-216ENST00000564870 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
FANCA-216ENST00000564870 WDR33Q9C0J8 1336 aaKnown RBP13.67□□□□□ -0.22
FANCA-216ENST00000564870 HSPA8P11142 646 aaKnown RBP13.67□□□□□ -0.22
FANCA-216ENST00000564870 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
FANCA-216ENST00000564870 PSMD1Q99460 953 aa13.67□□□□□ -0.22
FANCA-216ENST00000564870 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
FANCA-216ENST00000564870 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
FANCA-216ENST00000564870 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
FANCA-216ENST00000564870 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
FANCA-216ENST00000564870 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
FANCA-216ENST00000564870 DDX21Q9NR30 783 aaKnown RBP eCLIP13.66□□□□□ -0.22
FANCA-216ENST00000564870 ABCC12Q96J65 1359 aa13.66□□□□□ -0.22
FANCA-216ENST00000564870 TCERG1O14776 1098 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms