RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 ATP1A2P50993 1020 aa5.61□□□□□ -1.51
SUB1P3-201ENST00000564581 SFSWAPQ12872 951 aaKnown RBP5.61□□□□□ -1.51
SUB1P3-201ENST00000564581 LARGE2Q8N3Y3 721 aa5.61□□□□□ -1.51
SUB1P3-201ENST00000564581 HSH2DQ96JZ2 352 aa5.61□□□□□ -1.51
SUB1P3-201ENST00000564581 MARK1Q9P0L2 795 aa5.61□□□□□ -1.51
SUB1P3-201ENST00000564581 MKL2Q9ULH7 1088 aa5.61□□□□□ -1.51
SUB1P3-201ENST00000564581 PALM3A6NDB9 673 aaPredicted RBP5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 EFSO43281 561 aa5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 C21orf2O43822 256 aa5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 RASA1P20936 1047 aa5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 ZNF280CQ8ND82 737 aa5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 PHACTR1Q9C0D0 580 aa5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 PRR12Q9ULL5 1215 aa5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 MAFBQ9Y5Q3 323 aaPredicted RBP5.6□□□□□ -1.51
SUB1P3-201ENST00000564581 ADH6P28332 368 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 FAM182BQ5T319 152 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 SAMD5Q5TGI4 173 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 CHSY3Q70JA7 882 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 RAB44Q7Z6P3 723 aaPredicted RBP5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 SIX5Q8N196 739 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 RHPN1Q8TCX5 695 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 CHMP7Q8WUX9 453 aaPredicted RBP5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 CALR3Q96L12 384 aaKnown RBP5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 SLC30A3Q99726 388 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 SPOCK3Q9BQ16 436 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 NEUROD4Q9HD90 331 aa5.59□□□□□ -1.51
SUB1P3-201ENST00000564581 MSTNO14793 375 aa5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 PPP1R12BO60237 982 aaPredicted RBP5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 DGKGP49619 791 aa5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 PSMA6P60900 246 aaKnown RBP5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 CRTC2Q53ET0 693 aaPredicted RBP5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 ZNF468Q5VIY5 522 aaPredicted RBP5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 SYT9Q86SS6 491 aa5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 SCG3Q8WXD2 468 aaKnown RBP5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 PPP1R12CQ9BZL4 782 aa5.58□□□□□ -1.52
SUB1P3-201ENST00000564581 ATAD2Q6PL18 1390 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 IGHA1P01876 353 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 PROCP04070 461 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 KANK4Q5T7N3 995 aaPredicted RBP5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 NGLY1Q96IV0 654 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 HINFPQ9BQA5 517 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
SUB1P3-201ENST00000564581 A6NJR5 290 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 M0R2N6 131 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 LMOD1P29536 600 aaPredicted RBP5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 SEC13P55735 322 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 DPYDQ12882 1025 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 PTK7Q13308 1070 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 CDCA8Q53HL2 280 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 ALDH16A1Q8IZ83 802 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 SUSD3Q96L08 255 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 CEP63Q96MT8 703 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 BRD7Q9NPI1 651 aa5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 RBM19Q9Y4C8 960 aaKnown RBP5.56□□□□□ -1.52
SUB1P3-201ENST00000564581 LAMC2Q13753 1193 aa5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 C1orf53Q5VUE5 145 aa5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 LARP1Q6PKG0 1096 aaKnown RBP5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 POTEAQ6S8J7 498 aa5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 TRIM11Q96F44 468 aa5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 C2orf49Q9BVC5 232 aaPredicted RBP5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 AVENQ9NQS1 362 aaPredicted RBP5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 CHMP3Q9Y3E7 222 aa5.55□□□□□ -1.52
SUB1P3-201ENST00000564581 ELOA3CA0A087WX78 387 aaPredicted RBP5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 ELOA3DA6NLF2 546 aaPredicted RBP5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 GNB5O14775 395 aa5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 HIRAP54198 1017 aaPredicted RBP5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 SPEM2Q0P670 501 aa5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 ELOA3BQ3SY89 546 aa5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 C8orf86Q6ZUL3 223 aa5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 ELOA3Q8NG57 546 aa5.54□□□□□ -1.52
SUB1P3-201ENST00000564581 C1QTNF9BB2RNN3 333 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L15C9J2P7 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L10C9JJH3 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L13C9JLJ4 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L12C9JPN9 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L11C9JVI0 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L21D6R901 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L18D6R9N7 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L22D6RA61 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L17D6RBQ6 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L19D6RCP7 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L20D6RJB6 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 TYRO3Q06418 890 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 USP17L24Q0WX57 530 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 ANKMY2Q8IV38 441 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 MDFIQ99750 246 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 PLVAPQ9BX97 442 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 VRTNQ9H8Y1 702 aa5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 GPC6Q9Y625 555 aaPredicted RBP5.53□□□□□ -1.52
SUB1P3-201ENST00000564581 RFX1P22670 979 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 CHRNA4P43681 627 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 BAG6P46379 1132 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 CFAP70Q5T0N1 1121 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 CD163Q86VB7 1156 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 BHMTQ93088 406 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 ARXQ96QS3 562 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 ANKIB1Q9P2G1 1089 aa5.52□□□□□ -1.53
SUB1P3-201ENST00000564581 KCNH4Q9UQ05 1017 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms