RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
UBR1-205ENST00000564540 MX2P20592 715 aa9.86□□□□□ -0.83
UBR1-205ENST00000564540 HIRAP54198 1017 aaPredicted RBP9.86□□□□□ -0.83
UBR1-205ENST00000564540 SRSF11Q05519 484 aaKnown RBP9.86□□□□□ -0.83
UBR1-205ENST00000564540 STK32AQ8WU08 396 aa9.86□□□□□ -0.83
UBR1-205ENST00000564540 C2orf49Q9BVC5 232 aaPredicted RBP9.86□□□□□ -0.83
UBR1-205ENST00000564540 CFHR5Q9BXR6 569 aa9.86□□□□□ -0.83
UBR1-205ENST00000564540 IGF1RP08069 1367 aa9.86□□□□□ -0.83
UBR1-205ENST00000564540 PLA2G4EQ3MJ16 856 aa9.85□□□□□ -0.83
UBR1-205ENST00000564540 LYPD4Q6UWN0 246 aa9.85□□□□□ -0.83
UBR1-205ENST00000564540 PBXIP1Q96AQ6 731 aa9.85□□□□□ -0.83
UBR1-205ENST00000564540 PHACTR1Q9C0D0 580 aa9.85□□□□□ -0.83
UBR1-205ENST00000564540 ATXN7L1Q9ULK2 861 aaPredicted RBP9.85□□□□□ -0.83
UBR1-205ENST00000564540 GJA3Q9Y6H8 435 aa9.85□□□□□ -0.83
UBR1-205ENST00000564540 DCDC2BA2VCK2 349 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 ATXN7O15265 892 aaPredicted RBP9.84□□□□□ -0.83
UBR1-205ENST00000564540 FIGNL1Q6PIW4 674 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 LRRC69Q6ZNQ3 347 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 RHPN1Q8TCX5 695 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 SPOCK3Q9BQ16 436 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 TIMELESSQ9UNS1 1208 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 PHF24Q9UPV7 400 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 PCDHGC4Q9Y5F7 938 aa9.84□□□□□ -0.83
UBR1-205ENST00000564540 ATG7O95352 703 aa9.83□□□□□ -0.84
UBR1-205ENST00000564540 ITGB2P05107 769 aa9.83□□□□□ -0.84
UBR1-205ENST00000564540 IGFBP4P22692 258 aa9.83□□□□□ -0.84
UBR1-205ENST00000564540 ELOAQ14241 798 aaKnown RBP9.83□□□□□ -0.84
UBR1-205ENST00000564540 ALDH16A1Q8IZ83 802 aa9.83□□□□□ -0.84
UBR1-205ENST00000564540 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
UBR1-205ENST00000564540 FGFR3P22607 806 aa9.82□□□□□ -0.84
UBR1-205ENST00000564540 WEE1P30291 646 aa9.82□□□□□ -0.84
UBR1-205ENST00000564540 CTBSQ01459 385 aa9.82□□□□□ -0.84
UBR1-205ENST00000564540 STAG2Q8N3U4 1231 aa9.82□□□□□ -0.84
UBR1-205ENST00000564540 DCAF5Q96JK2 942 aa9.82□□□□□ -0.84
UBR1-205ENST00000564540 C2CD2LO14523 706 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 KHNYNO15037 678 aaKnown RBP9.81□□□□□ -0.84
UBR1-205ENST00000564540 CELA2BP08218 269 aaPredicted RBP9.81□□□□□ -0.84
UBR1-205ENST00000564540 MAPTP10636 758 aaKnown RBP9.81□□□□□ -0.84
UBR1-205ENST00000564540 MAP3K10Q02779 954 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 TNP2Q05952 138 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 FAM69CQ0P6D2 419 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 TMEM164Q5U3C3 297 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 C1orf53Q5VUE5 145 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 HSH2DQ96JZ2 352 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
UBR1-205ENST00000564540 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
UBR1-205ENST00000564540 SUPT5HO00267 1087 aaKnown RBP9.8□□□□□ -0.84
UBR1-205ENST00000564540 PROCP04070 461 aa9.8□□□□□ -0.84
UBR1-205ENST00000564540 ZNF280CQ8ND82 737 aa9.8□□□□□ -0.84
UBR1-205ENST00000564540 ACDQ96AP0 544 aa9.8□□□□□ -0.84
UBR1-205ENST00000564540 NEUROD4Q9HD90 331 aa9.8□□□□□ -0.84
UBR1-205ENST00000564540 PHF20L1A8MW92 1017 aa9.79□□□□□ -0.84
UBR1-205ENST00000564540 PRMT3O60678 531 aa9.79□□□□□ -0.84
UBR1-205ENST00000564540 CD33P20138 364 aa9.79□□□□□ -0.84
UBR1-205ENST00000564540 SAMD5Q5TGI4 173 aa9.79□□□□□ -0.84
UBR1-205ENST00000564540 ENAMQ9NRM1 1142 aa9.79□□□□□ -0.84
UBR1-205ENST00000564540 NSFL1CQ9UNZ2 370 aaKnown RBP9.79□□□□□ -0.84
UBR1-205ENST00000564540 FAM157BP0CG42 384 aa9.78□□□□□ -0.84
UBR1-205ENST00000564540 BMP4P12644 408 aa9.78□□□□□ -0.84
UBR1-205ENST00000564540 STRN4Q9NRL3 753 aa9.78□□□□□ -0.84
UBR1-205ENST00000564540 GPC6Q9Y625 555 aaPredicted RBP9.78□□□□□ -0.84
UBR1-205ENST00000564540 EFSO43281 561 aa9.77□□□□□ -0.85
UBR1-205ENST00000564540 SWI5Q1ZZU3 235 aa9.77□□□□□ -0.85
UBR1-205ENST00000564540 ERICH6Q7L0X2 663 aa9.77□□□□□ -0.85
UBR1-205ENST00000564540 SUSD3Q96L08 255 aa9.77□□□□□ -0.85
UBR1-205ENST00000564540 FOXO3O43524 673 aa9.76□□□□□ -0.85
UBR1-205ENST00000564540 MAP2K3P46734 347 aa9.76□□□□□ -0.85
UBR1-205ENST00000564540 FKBP5Q13451 457 aaPredicted RBP9.76□□□□□ -0.85
UBR1-205ENST00000564540 GRIN2CQ14957 1233 aa9.76□□□□□ -0.85
UBR1-205ENST00000564540 OCLNQ16625 522 aa9.76□□□□□ -0.85
UBR1-205ENST00000564540 OXCT2Q9BYC2 517 aaPredicted RBP9.76□□□□□ -0.85
UBR1-205ENST00000564540 RTN1Q16799 776 aa9.75□□□□□ -0.85
UBR1-205ENST00000564540 BEND7Q8N7W2 519 aaPredicted RBP9.74□□□□□ -0.85
UBR1-205ENST00000564540 VTI1AQ96AJ9 217 aa9.74□□□□□ -0.85
UBR1-205ENST00000564540 QTRT2Q9H974 415 aaKnown RBP9.74□□□□□ -0.85
UBR1-205ENST00000564540 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
UBR1-205ENST00000564540 ANKIB1Q9P2G1 1089 aa9.74□□□□□ -0.85
UBR1-205ENST00000564540 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
UBR1-205ENST00000564540 BCRP11274 1271 aa9.73□□□□□ -0.85
UBR1-205ENST00000564540 SFSWAPQ12872 951 aaKnown RBP9.73□□□□□ -0.85
UBR1-205ENST00000564540 C1orf229Q6ZS94 237 aaPredicted RBP9.73□□□□□ -0.85
UBR1-205ENST00000564540 CEP63Q96MT8 703 aa9.73□□□□□ -0.85
UBR1-205ENST00000564540 KLK14Q9P0G3 267 aa9.73□□□□□ -0.85
UBR1-205ENST00000564540 MARK1Q9P0L2 795 aa9.73□□□□□ -0.85
UBR1-205ENST00000564540 BCS1LQ9Y276 419 aa9.73□□□□□ -0.85
UBR1-205ENST00000564540 TYRO3Q06418 890 aa9.72□□□□□ -0.85
UBR1-205ENST00000564540 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
UBR1-205ENST00000564540 ARID3AQ99856 593 aa9.72□□□□□ -0.85
UBR1-205ENST00000564540 BRD7Q9NPI1 651 aa9.72□□□□□ -0.85
UBR1-205ENST00000564540 GGA1Q9UJY5 639 aa9.72□□□□□ -0.85
UBR1-205ENST00000564540 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.86
UBR1-205ENST00000564540 DGKZQ13574 1117 aa9.71□□□□□ -0.86
UBR1-205ENST00000564540 LAMC2Q13753 1193 aa9.71□□□□□ -0.86
UBR1-205ENST00000564540 CAPN12Q6ZSI9 719 aa9.71□□□□□ -0.86
UBR1-205ENST00000564540 BTLAQ7Z6A9 289 aa9.71□□□□□ -0.86
UBR1-205ENST00000564540 NEURL1BA8MQ27 555 aa9.7□□□□□ -0.86
UBR1-205ENST00000564540 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.7□□□□□ -0.86
UBR1-205ENST00000564540 OIP5O43482 229 aa9.7□□□□□ -0.86
UBR1-205ENST00000564540 PPP1R15AO75807 674 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms