RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 PDZRN3Q9UPQ7 1066 aa25.85■■□□□ 1.73
CMTM3-207ENST00000564060 ERVV-1B6SEH8 477 aa25.84■■□□□ 1.73
CMTM3-207ENST00000564060 BCS1LQ9Y276 419 aa25.84■■□□□ 1.73
CMTM3-207ENST00000564060 CCDC27Q2M243 656 aa25.83■■□□□ 1.73
CMTM3-207ENST00000564060 NCBP3Q53F19 620 aaKnown RBP25.83■■□□□ 1.73
CMTM3-207ENST00000564060 NGEFQ8N5V2 710 aa25.83■■□□□ 1.73
CMTM3-207ENST00000564060 CNBD1Q8NA66 436 aa25.83■■□□□ 1.73
CMTM3-207ENST00000564060 MAP3K15Q6ZN16 1313 aa25.83■■□□□ 1.73
CMTM3-207ENST00000564060 ST5P78524 1137 aa25.82■■□□□ 1.72
CMTM3-207ENST00000564060 ZNF853P0CG23 659 aa25.81■■□□□ 1.72
CMTM3-207ENST00000564060 KCNA3P22001 575 aa25.81■■□□□ 1.72
CMTM3-207ENST00000564060 PRR5LQ6MZQ0 368 aa25.81■■□□□ 1.72
CMTM3-207ENST00000564060 MBIPQ9NS73 344 aa25.81■■□□□ 1.72
CMTM3-207ENST00000564060 NIP7Q9Y221 180 aaKnown RBP eCLIP25.81■■□□□ 1.72
CMTM3-207ENST00000564060 ANKRD36CQ5JPF3 1778 aa25.8■■□□□ 1.72
CMTM3-207ENST00000564060 CHRNA5P30532 468 aa25.8■■□□□ 1.72
CMTM3-207ENST00000564060 PDE6BP35913 854 aa25.8■■□□□ 1.72
CMTM3-207ENST00000564060 DALRD3Q5D0E6 543 aaKnown RBP25.8■■□□□ 1.72
CMTM3-207ENST00000564060 BRIP1Q9BX63 1249 aa25.8■■□□□ 1.72
CMTM3-207ENST00000564060 ATP10DQ9P241 1426 aa25.8■■□□□ 1.72
CMTM3-207ENST00000564060 H0YIN7 160 aa25.79■■□□□ 1.72
CMTM3-207ENST00000564060 NBPF5PQ86XG9 351 aaPredicted RBP25.79■■□□□ 1.72
CMTM3-207ENST00000564060 COL11A2P13942 1736 aaPredicted RBP25.78■■□□□ 1.72
CMTM3-207ENST00000564060 HLFQ16534 295 aa25.77■■□□□ 1.72
CMTM3-207ENST00000564060 HDGFL1Q5TGJ6 251 aa25.77■■□□□ 1.72
CMTM3-207ENST00000564060 TPTE2Q6XPS3 522 aa25.77■■□□□ 1.72
CMTM3-207ENST00000564060 TTLL7Q6ZT98 887 aa25.77■■□□□ 1.72
CMTM3-207ENST00000564060 C2CD5Q86YS7 1000 aa25.77■■□□□ 1.72
CMTM3-207ENST00000564060 DDX21Q9NR30 783 aaKnown RBP eCLIP25.77■■□□□ 1.72
CMTM3-207ENST00000564060 CACNA1SQ13698 1873 aa25.77■■□□□ 1.72
CMTM3-207ENST00000564060 PDIA6Q15084 440 aa25.76■■□□□ 1.71
CMTM3-207ENST00000564060 KRT24Q2M2I5 525 aa25.76■■□□□ 1.71
CMTM3-207ENST00000564060 CHMP4AQ9BY43 222 aa25.76■■□□□ 1.71
CMTM3-207ENST00000564060 ARFGEF2Q9Y6D5 1785 aa25.76■■□□□ 1.71
CMTM3-207ENST00000564060 DUSP27Q5VZP5 1158 aa25.75■■□□□ 1.71
CMTM3-207ENST00000564060 LRP10Q7Z4F1 713 aa25.75■■□□□ 1.71
CMTM3-207ENST00000564060 WWC1Q8IX03 1113 aa25.75■■□□□ 1.71
CMTM3-207ENST00000564060 NECTIN2Q92692 538 aa25.75■■□□□ 1.71
CMTM3-207ENST00000564060 NYXQ9GZU5 481 aa25.75■■□□□ 1.71
CMTM3-207ENST00000564060 ZBTB3Q9H5J0 574 aa25.75■■□□□ 1.71
CMTM3-207ENST00000564060 DBF4Q9UBU7 674 aaPredicted RBP25.74■■□□□ 1.71
CMTM3-207ENST00000564060 IBTKQ9P2D0 1353 aaPredicted RBP25.73■■□□□ 1.71
CMTM3-207ENST00000564060 GIGYF2Q6Y7W6 1299 aaKnown RBP25.73■■□□□ 1.71
CMTM3-207ENST00000564060 FAM9BQ8IZU0 186 aa25.73■■□□□ 1.71
CMTM3-207ENST00000564060 TTLL6Q8N841 843 aa25.73■■□□□ 1.71
CMTM3-207ENST00000564060 ZNF784Q8NCA9 323 aaPredicted RBP25.73■■□□□ 1.71
CMTM3-207ENST00000564060 IL16Q14005 1332 aa25.72■■□□□ 1.71
CMTM3-207ENST00000564060 GTF2E1P29083 439 aaPredicted RBP25.72■■□□□ 1.71
CMTM3-207ENST00000564060 PROSER3Q2NL68 480 aa25.72■■□□□ 1.71
CMTM3-207ENST00000564060 CHPF2Q9P2E5 772 aa25.72■■□□□ 1.71
CMTM3-207ENST00000564060 ANXA1P04083 346 aa25.71■■□□□ 1.71
CMTM3-207ENST00000564060 HSP90AB3PQ58FF7 597 aa25.71■■□□□ 1.71
CMTM3-207ENST00000564060 ARHGAP27Q6ZUM4 889 aa25.71■■□□□ 1.71
CMTM3-207ENST00000564060 CCDC24Q8N4L8 307 aa25.71■■□□□ 1.71
CMTM3-207ENST00000564060 COPS6Q7L5N1 327 aa25.7■■□□□ 1.7
CMTM3-207ENST00000564060 XAGE3Q8WTP9 111 aa25.7■■□□□ 1.7
CMTM3-207ENST00000564060 HYPKQ9NX55 129 aa25.7■■□□□ 1.7
CMTM3-207ENST00000564060 SBF1O95248 1867 aa25.7■■□□□ 1.7
CMTM3-207ENST00000564060 AIMP1Q12904 312 aaKnown RBP25.69■■□□□ 1.7
CMTM3-207ENST00000564060 PARP10Q53GL7 1025 aa25.69■■□□□ 1.7
CMTM3-207ENST00000564060 ZNF622Q969S3 477 aaKnown RBP eCLIP25.69■■□□□ 1.7
CMTM3-207ENST00000564060 FAM177BA6PVY3 158 aa25.68■■□□□ 1.7
CMTM3-207ENST00000564060 ZNF34Q8IZ26 560 aa25.68■■□□□ 1.7
CMTM3-207ENST00000564060 CACNA1FO60840 1977 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 GPTP24298 496 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 STYK1Q6J9G0 422 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 PPP1R42Q7Z4L9 355 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 WDR63Q8IWG1 891 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 CNKSR1Q969H4 720 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 MASTLQ96GX5 879 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 ADCY9O60503 1353 aa25.67■■□□□ 1.7
CMTM3-207ENST00000564060 RIC1Q4ADV7 1423 aa25.66■■□□□ 1.7
CMTM3-207ENST00000564060 SRGNP10124 158 aa25.66■■□□□ 1.7
CMTM3-207ENST00000564060 CCDC88AQ3V6T2 1871 aa25.66■■□□□ 1.7
CMTM3-207ENST00000564060 UBN2Q6ZU65 1347 aa25.65■■□□□ 1.7
CMTM3-207ENST00000564060 SENP3-EIF4A1A0A087X0R7 540 aa25.65■■□□□ 1.7
CMTM3-207ENST00000564060 TNRC6CQ9HCJ0 1690 aaKnown RBP25.64■■□□□ 1.7
CMTM3-207ENST00000564060 RNF123Q5XPI4 1314 aa25.64■■□□□ 1.7
CMTM3-207ENST00000564060 FER1L6Q2WGJ9 1857 aa25.64■■□□□ 1.7
CMTM3-207ENST00000564060 KLRG2A4D1S0 409 aaPredicted RBP25.64■■□□□ 1.7
CMTM3-207ENST00000564060 ELL2O00472 640 aaPredicted RBP25.64■■□□□ 1.7
CMTM3-207ENST00000564060 CCDC30Q5VVM6 783 aa25.64■■□□□ 1.7
CMTM3-207ENST00000564060 C8orf58Q8NAV2 365 aa25.64■■□□□ 1.7
CMTM3-207ENST00000564060 TSR2Q969E8 191 aaKnown RBP25.64■■□□□ 1.7
CMTM3-207ENST00000564060 SLX4Q8IY92 1834 aa25.64■■□□□ 1.7
CMTM3-207ENST00000564060 NPR1P16066 1061 aa25.63■■□□□ 1.69
CMTM3-207ENST00000564060 PLBD2Q8NHP8 589 aa25.63■■□□□ 1.69
CMTM3-207ENST00000564060 SALL2Q9Y467 1007 aaPredicted RBP25.63■■□□□ 1.69
CMTM3-207ENST00000564060 SUSD4Q5VX71 490 aa25.62■■□□□ 1.69
CMTM3-207ENST00000564060 ANKRD13DQ6ZTN6 518 aa25.62■■□□□ 1.69
CMTM3-207ENST00000564060 TCIRG1Q13488 830 aa25.61■■□□□ 1.69
CMTM3-207ENST00000564060 SOGA3Q5TF21 947 aa25.61■■□□□ 1.69
CMTM3-207ENST00000564060 NUTM1Q86Y26 1132 aa25.61■■□□□ 1.69
CMTM3-207ENST00000564060 ABCC12Q96J65 1359 aa25.6■■□□□ 1.69
CMTM3-207ENST00000564060 NTSR2O95665 410 aa25.6■■□□□ 1.69
CMTM3-207ENST00000564060 UTP14AQ9BVJ6 771 aaKnown RBP25.6■■□□□ 1.69
CMTM3-207ENST00000564060 CCER2I3L3R5 266 aa25.59■■□□□ 1.69
CMTM3-207ENST00000564060 ALDH1B1P30837 517 aa25.59■■□□□ 1.69
CMTM3-207ENST00000564060 GOLGA2Q08379 1002 aa25.59■■□□□ 1.69
CMTM3-207ENST00000564060 ERFEQ4G0M1 354 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms