RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.49
AC009163.3-201ENST00000563554 DLEC1Q9Y238 1755 aa18.14■□□□□ 0.49
AC009163.3-201ENST00000563554 PROSER3Q2NL68 480 aa18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 USPL1Q5W0Q7 1092 aa18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 NARFQ9UHQ1 456 aa18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
AC009163.3-201ENST00000563554 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
AC009163.3-201ENST00000563554 STK31Q9BXU1 1019 aa18.12■□□□□ 0.49
AC009163.3-201ENST00000563554 SPON1Q9HCB6 807 aa18.12■□□□□ 0.49
AC009163.3-201ENST00000563554 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
AC009163.3-201ENST00000563554 BRCA1P38398 1863 aaKnown RBP18.12■□□□□ 0.49
AC009163.3-201ENST00000563554 VAMP4O75379 141 aa18.11■□□□□ 0.49
AC009163.3-201ENST00000563554 GYS1P13807 737 aa18.11■□□□□ 0.49
AC009163.3-201ENST00000563554 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
AC009163.3-201ENST00000563554 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
AC009163.3-201ENST00000563554 CAMTA2O94983 1202 aa18.09■□□□□ 0.49
AC009163.3-201ENST00000563554 POLD1P28340 1107 aa18.09■□□□□ 0.49
AC009163.3-201ENST00000563554 HYPKQ9NX55 129 aa18.09■□□□□ 0.49
AC009163.3-201ENST00000563554 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
AC009163.3-201ENST00000563554 DDX60Q8IY21 1712 aaKnown RBP18.09■□□□□ 0.49
AC009163.3-201ENST00000563554 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.49
AC009163.3-201ENST00000563554 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
AC009163.3-201ENST00000563554 TTLL7Q6ZT98 887 aa18.08■□□□□ 0.48
AC009163.3-201ENST00000563554 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.48
AC009163.3-201ENST00000563554 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.48
AC009163.3-201ENST00000563554 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
AC009163.3-201ENST00000563554 ZNF652Q9Y2D9 606 aa18.08■□□□□ 0.48
AC009163.3-201ENST00000563554 FKBP8Q14318 412 aa18.07■□□□□ 0.48
AC009163.3-201ENST00000563554 BCL2L12Q9HB09 334 aa18.07■□□□□ 0.48
AC009163.3-201ENST00000563554 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
AC009163.3-201ENST00000563554 PTGER2P43116 358 aa18.06■□□□□ 0.48
AC009163.3-201ENST00000563554 COPS6Q7L5N1 327 aa18.06■□□□□ 0.48
AC009163.3-201ENST00000563554 PHAXQ9H814 394 aaKnown RBP18.06■□□□□ 0.48
AC009163.3-201ENST00000563554 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
AC009163.3-201ENST00000563554 MMP10P09238 476 aa18.05■□□□□ 0.48
AC009163.3-201ENST00000563554 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
AC009163.3-201ENST00000563554 PPP1R1BQ9UD71 204 aaPredicted RBP18.05■□□□□ 0.48
AC009163.3-201ENST00000563554 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
AC009163.3-201ENST00000563554 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
AC009163.3-201ENST00000563554 BICDL1Q6ZP65 573 aa18.04■□□□□ 0.48
AC009163.3-201ENST00000563554 SPEF2Q9C093 1822 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 ERVV-1B6SEH8 477 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 RGL2O15211 777 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 CT47B1P0C2W7 299 aaPredicted RBP18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 HLFQ16534 295 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 TBC1D9BQ66K14 1250 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 G2E3Q7L622 706 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
AC009163.3-201ENST00000563554 ARFGEF1Q9Y6D6 1849 aa18.02■□□□□ 0.48
AC009163.3-201ENST00000563554 NFIXQ14938 502 aa18.02■□□□□ 0.48
AC009163.3-201ENST00000563554 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
AC009163.3-201ENST00000563554 ZNF428Q96B54 188 aa18.02■□□□□ 0.48
AC009163.3-201ENST00000563554 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 DDR1Q08345 913 aa18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 FLIIQ13045 1269 aa18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 KLHL34Q8N239 644 aa18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 NIP7Q9Y221 180 aaKnown RBP eCLIP18.01■□□□□ 0.47
AC009163.3-201ENST00000563554 POLRMTO00411 1230 aaKnown RBP18■□□□□ 0.47
AC009163.3-201ENST00000563554 ANKRD13DQ6ZTN6 518 aa18■□□□□ 0.47
AC009163.3-201ENST00000563554 RIC3Q7Z5B4 369 aa18■□□□□ 0.47
AC009163.3-201ENST00000563554 SETDB2Q96T68 719 aa18■□□□□ 0.47
AC009163.3-201ENST00000563554 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
AC009163.3-201ENST00000563554 TAF1P21675 1872 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 GPTP24298 496 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 TM4SF1P30408 202 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 SSH1Q8WYL5 1049 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 ADCY9O60503 1353 aa17.99■□□□□ 0.47
AC009163.3-201ENST00000563554 PXDNLA1KZ92 1463 aa17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 NPHP1O15259 732 aa17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 SERPINB2P05120 415 aa17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 RARSP54136 660 aaKnown RBP17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 MRPL50Q8N5N7 158 aaKnown RBP17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 UBN2Q6ZU65 1347 aa17.97■□□□□ 0.47
AC009163.3-201ENST00000563554 PI4KAP2A4QPH2 592 aa17.96■□□□□ 0.47
AC009163.3-201ENST00000563554 FAM177BA6PVY3 158 aa17.96■□□□□ 0.47
AC009163.3-201ENST00000563554 KSR2Q6VAB6 950 aa17.96■□□□□ 0.47
AC009163.3-201ENST00000563554 PI4KAP1Q8N8J0 262 aa17.96■□□□□ 0.47
AC009163.3-201ENST00000563554 MAP3K2Q9Y2U5 619 aa17.96■□□□□ 0.47
AC009163.3-201ENST00000563554 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 TCIRG1Q13488 830 aa17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 ZNF34Q8IZ26 560 aa17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 CNBD1Q8NA66 436 aa17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 MYD88Q99836 296 aa17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
AC009163.3-201ENST00000563554 PARP10Q53GL7 1025 aa17.94■□□□□ 0.46
AC009163.3-201ENST00000563554 PTPRCP08575 1304 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms