RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 PAPPAQ13219 1627 aa23.85■■□□□ 1.41
CDH5-204ENST00000563425 NEXNQ0ZGT2 675 aa23.84■■□□□ 1.41
CDH5-204ENST00000563425 OS9Q13438 667 aaPredicted RBP23.84■■□□□ 1.41
CDH5-204ENST00000563425 ERC1Q8IUD2 1116 aa23.84■■□□□ 1.41
CDH5-204ENST00000563425 METTL22Q9BUU2 404 aaPredicted RBP23.84■■□□□ 1.41
CDH5-204ENST00000563425 NEURL1BA8MQ27 555 aa23.83■■□□□ 1.41
CDH5-204ENST00000563425 ST18O60284 1047 aa23.82■■□□□ 1.4
CDH5-204ENST00000563425 BICC1Q9H694 974 aaKnown RBP23.82■■□□□ 1.4
CDH5-204ENST00000563425 TTC41PQ6P2S7 1318 aa23.82■■□□□ 1.4
CDH5-204ENST00000563425 RAB3GAP1Q15042 981 aa23.82■■□□□ 1.4
CDH5-204ENST00000563425 ANKRD13DQ6ZTN6 518 aa23.82■■□□□ 1.4
CDH5-204ENST00000563425 CARD10Q9BWT7 1032 aa23.82■■□□□ 1.4
CDH5-204ENST00000563425 GCKRQ14397 625 aa23.81■■□□□ 1.4
CDH5-204ENST00000563425 CLASRPQ8N2M8 674 aaKnown RBP23.81■■□□□ 1.4
CDH5-204ENST00000563425 ERVV-2B6SEH9 535 aa23.8■■□□□ 1.4
CDH5-204ENST00000563425 FOXD4L1Q9NU39 408 aa23.8■■□□□ 1.4
CDH5-204ENST00000563425 PA2G4Q9UQ80 394 aaKnown RBP23.8■■□□□ 1.4
CDH5-204ENST00000563425 EPB41L2O43491 1005 aaKnown RBP23.8■■□□□ 1.4
CDH5-204ENST00000563425 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
CDH5-204ENST00000563425 MYD88Q99836 296 aa23.8■■□□□ 1.4
CDH5-204ENST00000563425 IL2RBP14784 551 aa23.79■■□□□ 1.4
CDH5-204ENST00000563425 MCCP23508 829 aa23.79■■□□□ 1.4
CDH5-204ENST00000563425 TNPO1Q92973 898 aaKnown RBP23.79■■□□□ 1.4
CDH5-204ENST00000563425 CNTROBQ8N137 903 aa23.78■■□□□ 1.4
CDH5-204ENST00000563425 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
CDH5-204ENST00000563425 KCPQ6ZWJ8 1503 aa23.78■■□□□ 1.4
CDH5-204ENST00000563425 GLRX3O76003 335 aaKnown RBP23.78■■□□□ 1.4
CDH5-204ENST00000563425 ANAPC15P60006 121 aa23.78■■□□□ 1.4
CDH5-204ENST00000563425 IL17RAQ96F46 866 aa23.78■■□□□ 1.4
CDH5-204ENST00000563425 NUP188Q5SRE5 1749 aa23.78■■□□□ 1.4
CDH5-204ENST00000563425 ERBB4Q15303 1308 aa23.77■■□□□ 1.4
CDH5-204ENST00000563425 MAP4K4O95819 1239 aaPredicted RBP23.77■■□□□ 1.4
CDH5-204ENST00000563425 PIP4K2AP48426 406 aaPredicted RBP23.77■■□□□ 1.4
CDH5-204ENST00000563425 DDX11L8A8MPP1 907 aa23.76■■□□□ 1.39
CDH5-204ENST00000563425 TOGARAM1Q9Y4F4 1720 aa23.76■■□□□ 1.39
CDH5-204ENST00000563425 ECHDC1Q9NTX5 307 aa23.76■■□□□ 1.39
CDH5-204ENST00000563425 IL25Q9H293 177 aa23.75■■□□□ 1.39
CDH5-204ENST00000563425 COL15A1P39059 1388 aa23.75■■□□□ 1.39
CDH5-204ENST00000563425 SASH1O94885 1247 aa23.74■■□□□ 1.39
CDH5-204ENST00000563425 G3BP1Q13283 466 aaKnown RBP eCLIP23.74■■□□□ 1.39
CDH5-204ENST00000563425 GPATCH3Q96I76 525 aa23.74■■□□□ 1.39
CDH5-204ENST00000563425 IFIT2P09913 472 aaKnown RBP23.74■■□□□ 1.39
CDH5-204ENST00000563425 PLBD2Q8NHP8 589 aa23.74■■□□□ 1.39
CDH5-204ENST00000563425 PALD1Q9ULE6 856 aa23.74■■□□□ 1.39
CDH5-204ENST00000563425 SGSM2O43147 1006 aa23.73■■□□□ 1.39
CDH5-204ENST00000563425 EPHA10Q5JZY3 1008 aa23.73■■□□□ 1.39
CDH5-204ENST00000563425 GBP4Q96PP9 640 aa23.73■■□□□ 1.39
CDH5-204ENST00000563425 STRN4Q9NRL3 753 aa23.73■■□□□ 1.39
CDH5-204ENST00000563425 EVA1CP58658 441 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 AACSQ86V21 672 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 NBPF26B4DH59 902 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 NEK4P51957 841 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 NBPF14Q5TI25 921 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 NBPF10Q6P3W6 841 aaKnown RBP23.72■■□□□ 1.39
CDH5-204ENST00000563425 NBPF15Q8N660 670 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 TNS2Q63HR2 1409 aa23.72■■□□□ 1.39
CDH5-204ENST00000563425 TRAK2O60296 914 aa23.71■■□□□ 1.39
CDH5-204ENST00000563425 MCM2P49736 904 aa23.71■■□□□ 1.39
CDH5-204ENST00000563425 CLEC17AQ6ZS10 378 aa23.71■■□□□ 1.39
CDH5-204ENST00000563425 DDX54Q8TDD1 881 aaKnown RBP23.71■■□□□ 1.39
CDH5-204ENST00000563425 CWC22Q9HCG8 908 aaKnown RBP23.71■■□□□ 1.39
CDH5-204ENST00000563425 HSPA4P34932 840 aa23.7■■□□□ 1.38
CDH5-204ENST00000563425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.7■■□□□ 1.38
CDH5-204ENST00000563425 RAD50Q92878 1312 aa23.7■■□□□ 1.38
CDH5-204ENST00000563425 TJP1Q07157 1748 aa23.69■■□□□ 1.38
CDH5-204ENST00000563425 SSFA2P28290 1259 aa23.69■■□□□ 1.38
CDH5-204ENST00000563425 RABL6Q3YEC7 729 aaPredicted RBP23.69■■□□□ 1.38
CDH5-204ENST00000563425 EAF2Q96CJ1 260 aaPredicted RBP23.69■■□□□ 1.38
CDH5-204ENST00000563425 UBE3BQ7Z3V4 1068 aa23.69■■□□□ 1.38
CDH5-204ENST00000563425 COPRSQ9NQ92 184 aa23.69■■□□□ 1.38
CDH5-204ENST00000563425 ITGB4P16144 1822 aa23.68■■□□□ 1.38
CDH5-204ENST00000563425 ATP5J2-PTCD1G3V325 749 aa23.68■■□□□ 1.38
CDH5-204ENST00000563425 PTCD1O75127 700 aaKnown RBP23.68■■□□□ 1.38
CDH5-204ENST00000563425 NUCB2P80303 420 aa23.68■■□□□ 1.38
CDH5-204ENST00000563425 IL27Q8NEV9 243 aa23.68■■□□□ 1.38
CDH5-204ENST00000563425 SIL1Q9H173 461 aa23.68■■□□□ 1.38
CDH5-204ENST00000563425 COL14A1Q05707 1796 aaKnown RBP23.67■■□□□ 1.38
CDH5-204ENST00000563425 CASP7P55210 303 aa23.67■■□□□ 1.38
CDH5-204ENST00000563425 LSG1Q9H089 658 aaKnown RBP23.67■■□□□ 1.38
CDH5-204ENST00000563425 A0A087WZG4 1122 aa23.67■■□□□ 1.38
CDH5-204ENST00000563425 PTMSP20962 102 aa23.67■■□□□ 1.38
CDH5-204ENST00000563425 RFX5P48382 616 aaPredicted RBP23.67■■□□□ 1.38
CDH5-204ENST00000563425 KLHDC4Q8TBB5 520 aa23.67■■□□□ 1.38
CDH5-204ENST00000563425 EVI5LQ96CN4 794 aa23.67■■□□□ 1.38
CDH5-204ENST00000563425 CYP2E1P05181 493 aaPredicted RBP23.66■■□□□ 1.38
CDH5-204ENST00000563425 CWC27Q6UX04 472 aaKnown RBP23.66■■□□□ 1.38
CDH5-204ENST00000563425 JARID2Q92833 1246 aaPredicted RBP23.66■■□□□ 1.38
CDH5-204ENST00000563425 RUFY2Q8WXA3 655 aa23.65■■□□□ 1.38
CDH5-204ENST00000563425 TMX3Q96JJ7 454 aa23.65■■□□□ 1.38
CDH5-204ENST00000563425 DIAPH3Q9NSV4 1193 aa23.65■■□□□ 1.38
CDH5-204ENST00000563425 ZGPATQ8N5A5 531 aaKnown RBP23.65■■□□□ 1.38
CDH5-204ENST00000563425 CCDC8Q9H0W5 538 aaPredicted RBP23.65■■□□□ 1.38
CDH5-204ENST00000563425 A1BGP04217 495 aa23.64■■□□□ 1.37
CDH5-204ENST00000563425 TTLL7Q6ZT98 887 aa23.64■■□□□ 1.37
CDH5-204ENST00000563425 KIAA1211Q6ZU35 1233 aa23.64■■□□□ 1.37
CDH5-204ENST00000563425 PTPN12Q05209 780 aaKnown RBP23.63■■□□□ 1.37
CDH5-204ENST00000563425 TLR7Q9NYK1 1049 aaKnown RBP23.63■■□□□ 1.37
CDH5-204ENST00000563425 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
CDH5-204ENST00000563425 H7C1W4 665 aa23.63■■□□□ 1.37
CDH5-204ENST00000563425 CUL4AQ13619 759 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms