RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 NBPF7P0C2Y1 421 aaPredicted RBP5.83□□□□□ -1.48
TCF4-215ENST00000562638 PECAM1P16284 738 aaPredicted RBP5.83□□□□□ -1.48
TCF4-215ENST00000562638 ELF1P32519 619 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 DEUP1Q05D60 604 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 MFSD4BQ5TF39 518 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 ELOA2Q8IYF1 753 aaPredicted RBP5.83□□□□□ -1.48
TCF4-215ENST00000562638 ANKRD13AQ8IZ07 590 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 CCDC191Q8NCU4 936 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 ARMC2Q8NEN0 867 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 MICAL1Q8TDZ2 1067 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 TEKT1Q969V4 418 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 CRACR2AQ9BSW2 395 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 JADE2Q9NQC1 790 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 SPATS2LQ9NUQ6 558 aaKnown RBP5.83□□□□□ -1.48
TCF4-215ENST00000562638 GOLGA3Q08378 1498 aa5.83□□□□□ -1.48
TCF4-215ENST00000562638 CLIP1P30622 1438 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 MARCH6O60337 910 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 FMNL1O95466 1100 aaPredicted RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 IVLP07476 585 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 ZNF24P17028 368 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 RAB27AP51159 221 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 PDE3BQ13370 1112 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 VARS2Q5ST30 1063 aaKnown RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 TEX35Q5T0J7 233 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 ACBD5Q5T8D3 534 aaPredicted RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 C20orf194Q5TEA3 1177 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 HHATQ5VTY9 493 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 MYLK4Q86YV6 388 aaPredicted RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 SMC5Q8IY18 1101 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 PHC3Q8NDX5 983 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 TBC1D5Q92609 795 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 CCDC102AQ96A19 550 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 AGBL1Q96MI9 1066 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 CCDC85AQ96PX6 553 aaPredicted RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 YIPF2Q9BWQ6 316 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 TRIM7Q9C029 511 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 TRIM6Q9C030 488 aaPredicted RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 RWDD1Q9H446 243 aaPredicted RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 RBM27Q9P2N5 1060 aaKnown RBP5.82□□□□□ -1.48
TCF4-215ENST00000562638 TMEM98Q9Y2Y6 226 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 NCOA1Q15788 1441 aa5.82□□□□□ -1.48
TCF4-215ENST00000562638 FAM177BA6PVY3 158 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 EIF3CLB5ME19 914 aaKnown RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 F8VZ95 297 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 PDLIM1O00151 329 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 NEBLO76041 1014 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 IGHDP01880 384 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 HOXA10P31260 410 aaPredicted RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 COPB2P35606 906 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 USP8P40818 1118 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 CCNHP51946 323 aaPredicted RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 HDLBPQ00341 1268 aaKnown RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 DDR1Q08345 913 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 SFSWAPQ12872 951 aaKnown RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 NEDD9Q14511 834 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 TAF7Q15545 349 aaPredicted RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 KMT5BQ4FZB7 885 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 TBC1D10BQ4KMP7 808 aaPredicted RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 RNF20Q5VTR2 975 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 CDCA2Q69YH5 1023 aaPredicted RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 GPR153Q6NV75 609 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 PMFBP1Q8TBY8 1022 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 KIAA1524Q8TCG1 905 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 TCP11Q8WWU5 503 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 DNAAF4Q8WXU2 420 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 RMDN2Q96LZ7 410 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 CFAP53Q96M91 514 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 EIF3CQ99613 913 aaKnown RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 HOMER3Q9NSC5 361 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 TMOD4Q9NZQ9 345 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
TCF4-215ENST00000562638 LRRFIP2Q9Y608 721 aaKnown RBP5.81□□□□□ -1.48
TCF4-215ENST00000562638 HMGB1P1B2RPK0 211 aaPredicted RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 ATP8B1O43520 1251 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 KIF5CO60282 957 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 TPPPO94811 219 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 H2AFXP16104 143 aaPredicted RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 VCAM1P19320 739 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 TPM4P67936 248 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 GPS2Q13227 327 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 C16orf87Q6PH81 154 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 OTUD6AQ7L8S5 288 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 CATIPQ7Z7H3 387 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 SDCCAG8Q86SQ7 713 aaPredicted RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 TRIM42Q8IWZ5 723 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 MICALL2Q8IY33 904 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 ZNF687Q8N1G0 1237 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 NEK11Q8NG66 645 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 EXOC4Q96A65 974 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 BICD1Q96G01 975 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 RBM17Q96I25 401 aaKnown RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 THUMPD2Q9BTF0 503 aaKnown RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 UTP14AQ9BVJ6 771 aaKnown RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 MRS2Q9HD23 443 aa5.8□□□□□ -1.48
TCF4-215ENST00000562638 BARX2Q9UMQ3 279 aaPredicted RBP5.8□□□□□ -1.48
TCF4-215ENST00000562638 A0A087WUV0 522 aaPredicted RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 EME2A4GXA9 379 aaPredicted RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 HTATSF1O43719 755 aaKnown RBP5.79□□□□□ -1.48
TCF4-215ENST00000562638 FCHSD2O94868 740 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms