RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
AC055876.4-201ENST00000562515 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
AC055876.4-201ENST00000562515 CEMIPQ8WUJ3 1361 aa12.74□□□□□ -0.37
AC055876.4-201ENST00000562515 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
AC055876.4-201ENST00000562515 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
AC055876.4-201ENST00000562515 NEFMP07197 916 aa12.73□□□□□ -0.37
AC055876.4-201ENST00000562515 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
AC055876.4-201ENST00000562515 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
AC055876.4-201ENST00000562515 PRELPP51888 382 aa12.73□□□□□ -0.37
AC055876.4-201ENST00000562515 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
AC055876.4-201ENST00000562515 NBPF5PQ86XG9 351 aaPredicted RBP12.73□□□□□ -0.37
AC055876.4-201ENST00000562515 SCN4AP35499 1836 aa12.72□□□□□ -0.37
AC055876.4-201ENST00000562515 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
AC055876.4-201ENST00000562515 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
AC055876.4-201ENST00000562515 JMYQ8N9B5 988 aa12.72□□□□□ -0.37
AC055876.4-201ENST00000562515 MASTLQ96GX5 879 aa12.72□□□□□ -0.37
AC055876.4-201ENST00000562515 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
AC055876.4-201ENST00000562515 KCNQ3O43525 872 aa12.71□□□□□ -0.37
AC055876.4-201ENST00000562515 CAPN15O75808 1086 aa12.71□□□□□ -0.37
AC055876.4-201ENST00000562515 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
AC055876.4-201ENST00000562515 MCM10Q7L590 875 aa12.71□□□□□ -0.37
AC055876.4-201ENST00000562515 KDM3BQ7LBC6 1761 aa12.71□□□□□ -0.38
AC055876.4-201ENST00000562515 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 SNRPA1P09661 255 aaKnown RBP12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 GTF2E1P29083 439 aaPredicted RBP12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 TNS4Q8IZW8 715 aa12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 PHACTR3Q96KR7 559 aa12.7□□□□□ -0.38
AC055876.4-201ENST00000562515 NUP98P52948 1817 aa12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 IQCA1LA6NCM1 817 aa12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 HSPA1AP0DMV8 641 aaKnown RBP12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 HSPA1BP0DMV9 641 aaKnown RBP12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 SRGNP10124 158 aa12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 COL13A1Q5TAT6 717 aaPredicted RBP12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
AC055876.4-201ENST00000562515 PRAMEF22A3QJZ6 481 aa12.68□□□□□ -0.38
AC055876.4-201ENST00000562515 DDNO94850 711 aaPredicted RBP12.68□□□□□ -0.38
AC055876.4-201ENST00000562515 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
AC055876.4-201ENST00000562515 CLEC4GQ6UXB4 293 aa12.68□□□□□ -0.38
AC055876.4-201ENST00000562515 NPR1P16066 1061 aa12.67□□□□□ -0.38
AC055876.4-201ENST00000562515 PPP2R1AP30153 589 aa12.67□□□□□ -0.38
AC055876.4-201ENST00000562515 DCTN1Q14203 1278 aa12.67□□□□□ -0.38
AC055876.4-201ENST00000562515 TPTE2Q6XPS3 522 aa12.67□□□□□ -0.38
AC055876.4-201ENST00000562515 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
AC055876.4-201ENST00000562515 POTECB2RU33 542 aa12.65□□□□□ -0.38
AC055876.4-201ENST00000562515 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
AC055876.4-201ENST00000562515 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.38
AC055876.4-201ENST00000562515 NGEFQ8N5V2 710 aa12.65□□□□□ -0.38
AC055876.4-201ENST00000562515 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
AC055876.4-201ENST00000562515 MKRN1Q9UHC7 482 aaKnown RBP12.65□□□□□ -0.38
AC055876.4-201ENST00000562515 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 HTATSF1O43719 755 aaKnown RBP12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
AC055876.4-201ENST00000562515 ALDH1B1P30837 517 aa12.63□□□□□ -0.39
AC055876.4-201ENST00000562515 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
AC055876.4-201ENST00000562515 PNISRQ8TF01 805 aaKnown RBP12.63□□□□□ -0.39
AC055876.4-201ENST00000562515 RPGRQ92834 1020 aaKnown RBP12.63□□□□□ -0.39
AC055876.4-201ENST00000562515 ANKRD36CQ5JPF3 1778 aa12.63□□□□□ -0.39
AC055876.4-201ENST00000562515 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 ABCC12Q96J65 1359 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 RGL2O15211 777 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 NBPF10Q6P3W6 841 aaKnown RBP12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 NBPF15Q8N660 670 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 HACL1Q9UJ83 578 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
AC055876.4-201ENST00000562515 MYL6BP14649 208 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 HLFQ16534 295 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 OLFM4Q6UX06 510 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 AIDAQ96BJ3 306 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 RRP7AQ9Y3A4 280 aaKnown RBP12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
AC055876.4-201ENST00000562515 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
AC055876.4-201ENST00000562515 GPTP24298 496 aa12.6□□□□□ -0.39
AC055876.4-201ENST00000562515 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
AC055876.4-201ENST00000562515 TMX4Q9H1E5 349 aaPredicted RBP12.6□□□□□ -0.39
AC055876.4-201ENST00000562515 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
AC055876.4-201ENST00000562515 MAP3K15Q6ZN16 1313 aa12.6□□□□□ -0.39
AC055876.4-201ENST00000562515 EPHX2P34913 555 aa12.59□□□□□ -0.39
AC055876.4-201ENST00000562515 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
AC055876.4-201ENST00000562515 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
AC055876.4-201ENST00000562515 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
AC055876.4-201ENST00000562515 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
AC055876.4-201ENST00000562515 GJA3Q9Y6H8 435 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms