RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
RPL28-211ENST00000560881 HLFQ16534 295 aa21.51■■□□□ 1.03
RPL28-211ENST00000560881 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
RPL28-211ENST00000560881 ZBTB3Q9H5J0 574 aa21.51■■□□□ 1.03
RPL28-211ENST00000560881 NFIXQ14938 502 aa21.5■■□□□ 1.03
RPL28-211ENST00000560881 TBC1D9BQ66K14 1250 aa21.5■■□□□ 1.03
RPL28-211ENST00000560881 XAGE3Q8WTP9 111 aa21.5■■□□□ 1.03
RPL28-211ENST00000560881 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
RPL28-211ENST00000560881 VAMP4O75379 141 aa21.5■■□□□ 1.03
RPL28-211ENST00000560881 COPS6Q7L5N1 327 aa21.5■■□□□ 1.03
RPL28-211ENST00000560881 KLHL34Q8N239 644 aa21.5■■□□□ 1.03
RPL28-211ENST00000560881 MAP3K15Q6ZN16 1313 aa21.49■■□□□ 1.03
RPL28-211ENST00000560881 CCDC30Q5VVM6 783 aa21.49■■□□□ 1.03
RPL28-211ENST00000560881 KIF6Q6ZMV9 814 aa21.49■■□□□ 1.03
RPL28-211ENST00000560881 TM4SF1P30408 202 aa21.48■■□□□ 1.03
RPL28-211ENST00000560881 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
RPL28-211ENST00000560881 PHAXQ9H814 394 aaKnown RBP21.48■■□□□ 1.03
RPL28-211ENST00000560881 POLRMTO00411 1230 aaKnown RBP21.47■■□□□ 1.03
RPL28-211ENST00000560881 ARFGEF2Q9Y6D5 1785 aa21.47■■□□□ 1.03
RPL28-211ENST00000560881 TRMT2AQ8IZ69 625 aaKnown RBP21.47■■□□□ 1.03
RPL28-211ENST00000560881 NRXN2Q9P2S2 1712 aa21.46■■□□□ 1.03
RPL28-211ENST00000560881 PARP3Q9Y6F1 533 aa21.46■■□□□ 1.03
RPL28-211ENST00000560881 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
RPL28-211ENST00000560881 UTRNP46939 3433 aa21.45■■□□□ 1.02
RPL28-211ENST00000560881 HYPKQ9NX55 129 aa21.45■■□□□ 1.02
RPL28-211ENST00000560881 ANKRD36CQ5JPF3 1778 aa21.45■■□□□ 1.02
RPL28-211ENST00000560881 ZNF652Q9Y2D9 606 aa21.44■■□□□ 1.02
RPL28-211ENST00000560881 KIF13BQ9NQT8 1826 aa21.44■■□□□ 1.02
RPL28-211ENST00000560881 CACNA1FO60840 1977 aa21.44■■□□□ 1.02
RPL28-211ENST00000560881 ERVV-1B6SEH8 477 aa21.44■■□□□ 1.02
RPL28-211ENST00000560881 G2E3Q7L622 706 aa21.44■■□□□ 1.02
RPL28-211ENST00000560881 STK31Q9BXU1 1019 aa21.44■■□□□ 1.02
RPL28-211ENST00000560881 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
RPL28-211ENST00000560881 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
RPL28-211ENST00000560881 CARMIL3Q8ND23 1372 aa21.42■■□□□ 1.02
RPL28-211ENST00000560881 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
RPL28-211ENST00000560881 GPTP24298 496 aa21.42■■□□□ 1.02
RPL28-211ENST00000560881 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
RPL28-211ENST00000560881 C10orf71Q711Q0 1435 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 SERPINB2P05120 415 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 GIGYF2Q6Y7W6 1299 aaKnown RBP21.41■■□□□ 1.02
RPL28-211ENST00000560881 CCDC24Q8N4L8 307 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 SETDB2Q96T68 719 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 SYT17Q9BSW7 474 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 N4BP2Q86UW6 1770 aaPredicted RBP21.41■■□□□ 1.02
RPL28-211ENST00000560881 ATP10DQ9P241 1426 aa21.41■■□□□ 1.02
RPL28-211ENST00000560881 FAM177BA6PVY3 158 aa21.4■■□□□ 1.02
RPL28-211ENST00000560881 ZNF428Q96B54 188 aa21.4■■□□□ 1.02
RPL28-211ENST00000560881 UBN2Q6ZU65 1347 aa21.4■■□□□ 1.02
RPL28-211ENST00000560881 ANKRD31Q8N7Z5 1873 aa21.39■■□□□ 1.02
RPL28-211ENST00000560881 ANKRD13DQ6ZTN6 518 aa21.39■■□□□ 1.01
RPL28-211ENST00000560881 PLBD2Q8NHP8 589 aa21.39■■□□□ 1.01
RPL28-211ENST00000560881 CHMP4AQ9BY43 222 aa21.39■■□□□ 1.01
RPL28-211ENST00000560881 RGL2O15211 777 aa21.38■■□□□ 1.01
RPL28-211ENST00000560881 BCL2L13Q9BXK5 485 aa21.38■■□□□ 1.01
RPL28-211ENST00000560881 FLIIQ13045 1269 aa21.37■■□□□ 1.01
RPL28-211ENST00000560881 PRR5LQ6MZQ0 368 aa21.37■■□□□ 1.01
RPL28-211ENST00000560881 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
RPL28-211ENST00000560881 ZNF34Q8IZ26 560 aa21.37■■□□□ 1.01
RPL28-211ENST00000560881 YTHDC1Q96MU7 727 aaKnown RBP21.37■■□□□ 1.01
RPL28-211ENST00000560881 WWC3Q9ULE0 1092 aa21.36■■□□□ 1.01
RPL28-211ENST00000560881 CD2APQ9Y5K6 639 aa21.36■■□□□ 1.01
RPL28-211ENST00000560881 ADCY9O60503 1353 aa21.36■■□□□ 1.01
RPL28-211ENST00000560881 PXDNLA1KZ92 1463 aa21.35■■□□□ 1.01
RPL28-211ENST00000560881 NBPF5PQ86XG9 351 aaPredicted RBP21.35■■□□□ 1.01
RPL28-211ENST00000560881 CNBD1Q8NA66 436 aa21.35■■□□□ 1.01
RPL28-211ENST00000560881 SSH1Q8WYL5 1049 aa21.35■■□□□ 1.01
RPL28-211ENST00000560881 PI4KAP2A4QPH2 592 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 ATP5J2-PTCD1G3V325 749 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 NPHP1O15259 732 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 TCIRG1Q13488 830 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 SUSD4Q5VX71 490 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 PI4KAP1Q8N8J0 262 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 FKBP5Q13451 457 aaPredicted RBP21.34■■□□□ 1.01
RPL28-211ENST00000560881 NUTM1Q86Y26 1132 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 MAP3K2Q9Y2U5 619 aa21.34■■□□□ 1.01
RPL28-211ENST00000560881 COL11A2P13942 1736 aaPredicted RBP21.33■■□□□ 1.01
RPL28-211ENST00000560881 TNRC6CQ9HCJ0 1690 aaKnown RBP21.33■■□□□ 1.01
RPL28-211ENST00000560881 DDX58O95786 925 aaKnown RBP21.33■■□□□ 1
RPL28-211ENST00000560881 ABCC12Q96J65 1359 aa21.32■■□□□ 1
RPL28-211ENST00000560881 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
RPL28-211ENST00000560881 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
RPL28-211ENST00000560881 MYD88Q99836 296 aa21.32■■□□□ 1
RPL28-211ENST00000560881 BRCA1P38398 1863 aaKnown RBP21.32■■□□□ 1
RPL28-211ENST00000560881 A0A0G2JLW4 131 aa21.31■■□□□ 1
RPL28-211ENST00000560881 KSR2Q6VAB6 950 aa21.31■■□□□ 1
RPL28-211ENST00000560881 NLRP10Q86W26 655 aa21.31■■□□□ 1
RPL28-211ENST00000560881 F6X3S4 739 aa21.31■■□□□ 1
RPL28-211ENST00000560881 NTSR2O95665 410 aa21.31■■□□□ 1
RPL28-211ENST00000560881 CHRNA5P30532 468 aa21.31■■□□□ 1
RPL28-211ENST00000560881 ISCA1Q9BUE6 129 aa21.31■■□□□ 1
RPL28-211ENST00000560881 ST5P78524 1137 aa21.3■■□□□ 1
RPL28-211ENST00000560881 ERFEQ4G0M1 354 aa21.3■■□□□ 1
RPL28-211ENST00000560881 SMC4Q9NTJ3 1288 aa21.3■■□□□ 1
RPL28-211ENST00000560881 DLEC1Q9Y238 1755 aa21.3■■□□□ 1
RPL28-211ENST00000560881 DPEP1P16444 411 aa21.29■■□□□ 1
RPL28-211ENST00000560881 PARP10Q53GL7 1025 aa21.29■■□□□ 1
RPL28-211ENST00000560881 TPTE2Q6XPS3 522 aa21.29■■□□□ 1
RPL28-211ENST00000560881 SYNE4Q8N205 404 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms