RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 ANXA1P04083 346 aa13.12□□□□□ -0.31
DCAF11-227ENST00000560046 PDE1AP54750 535 aa13.12□□□□□ -0.31
DCAF11-227ENST00000560046 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
DCAF11-227ENST00000560046 HDAC5Q9UQL6 1122 aa13.12□□□□□ -0.31
DCAF11-227ENST00000560046 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
DCAF11-227ENST00000560046 UTYO14607 1347 aa13.12□□□□□ -0.31
DCAF11-227ENST00000560046 UTRNP46939 3433 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
DCAF11-227ENST00000560046 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
DCAF11-227ENST00000560046 SDSP20132 328 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
DCAF11-227ENST00000560046 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
DCAF11-227ENST00000560046 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 PPP1R42Q7Z4L9 355 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 ARFGEF2Q9Y6D5 1785 aa13.11□□□□□ -0.31
DCAF11-227ENST00000560046 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
DCAF11-227ENST00000560046 APBB1O00213 710 aa13.1□□□□□ -0.31
DCAF11-227ENST00000560046 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
DCAF11-227ENST00000560046 LINS1Q8NG48 757 aa13.1□□□□□ -0.31
DCAF11-227ENST00000560046 ZCRB1Q8TBF4 217 aaKnown RBP13.1□□□□□ -0.31
DCAF11-227ENST00000560046 ZNF496Q96IT1 587 aaPredicted RBP13.1□□□□□ -0.31
DCAF11-227ENST00000560046 KIF2CQ99661 725 aa13.1□□□□□ -0.31
DCAF11-227ENST00000560046 PCDH11XQ9BZA7 1347 aa13.1□□□□□ -0.31
DCAF11-227ENST00000560046 PCDH11YQ9BZA8 1340 aa13.1□□□□□ -0.31
DCAF11-227ENST00000560046 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
DCAF11-227ENST00000560046 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
DCAF11-227ENST00000560046 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
DCAF11-227ENST00000560046 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
DCAF11-227ENST00000560046 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
DCAF11-227ENST00000560046 ERBB4Q15303 1308 aa13.09□□□□□ -0.31
DCAF11-227ENST00000560046 ERVV-2B6SEH9 535 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 MX1P20591 662 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 CABP4P57796 275 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
DCAF11-227ENST00000560046 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
DCAF11-227ENST00000560046 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.32
DCAF11-227ENST00000560046 IL2RBP14784 551 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 USP26Q9BXU7 913 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
DCAF11-227ENST00000560046 COL15A1P39059 1388 aa13.07□□□□□ -0.32
DCAF11-227ENST00000560046 TNS2Q63HR2 1409 aa13.06□□□□□ -0.32
DCAF11-227ENST00000560046 SRGAP3O43295 1099 aa13.06□□□□□ -0.32
DCAF11-227ENST00000560046 SURF6O75683 361 aaKnown RBP13.06□□□□□ -0.32
DCAF11-227ENST00000560046 RHPN1Q8TCX5 695 aa13.06□□□□□ -0.32
DCAF11-227ENST00000560046 ITGB4P16144 1822 aa13.06□□□□□ -0.32
DCAF11-227ENST00000560046 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 GRM8O00222 908 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 APBA3O96018 575 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 XAGE3Q8WTP9 111 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 METTL22Q9BUU2 404 aaPredicted RBP13.05□□□□□ -0.32
DCAF11-227ENST00000560046 C9orf78Q9NZ63 289 aaPredicted RBP13.05□□□□□ -0.32
DCAF11-227ENST00000560046 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
DCAF11-227ENST00000560046 ERC2O15083 957 aa13.04□□□□□ -0.32
DCAF11-227ENST00000560046 TRIM37O94972 964 aa13.04□□□□□ -0.32
DCAF11-227ENST00000560046 REC8O95072 547 aa13.04□□□□□ -0.32
DCAF11-227ENST00000560046 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
DCAF11-227ENST00000560046 KAZALD1Q96I82 304 aa13.04□□□□□ -0.32
DCAF11-227ENST00000560046 SUCLG2Q96I99 432 aa13.04□□□□□ -0.32
DCAF11-227ENST00000560046 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 DDIT3P35638 169 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 RABEP1Q15276 862 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 RIC3Q7Z5B4 369 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
DCAF11-227ENST00000560046 TJP1Q07157 1748 aa13.02□□□□□ -0.32
DCAF11-227ENST00000560046 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.33
DCAF11-227ENST00000560046 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
DCAF11-227ENST00000560046 GCKRQ14397 625 aa13.02□□□□□ -0.33
DCAF11-227ENST00000560046 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
DCAF11-227ENST00000560046 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
DCAF11-227ENST00000560046 ESYT1Q9BSJ8 1104 aa13.02□□□□□ -0.33
DCAF11-227ENST00000560046 SLKQ9H2G2 1235 aaPredicted RBP13.02□□□□□ -0.33
DCAF11-227ENST00000560046 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
DCAF11-227ENST00000560046 MYL6BP14649 208 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 CHMLP26374 656 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 EVA1CP58658 441 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 IL17RAQ96F46 866 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 IL1RAPL2Q9NP60 686 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
DCAF11-227ENST00000560046 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
DCAF11-227ENST00000560046 FRAT2O75474 233 aaPredicted RBP13□□□□□ -0.33
DCAF11-227ENST00000560046 SLC34A2O95436 690 aa13□□□□□ -0.33
DCAF11-227ENST00000560046 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms