RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 DOT1LQ8TEK3 1739 aa17.79■□□□□ 0.44
RABGGTA-212ENST00000559974 RXRBP28702 533 aa17.79■□□□□ 0.44
RABGGTA-212ENST00000559974 POLA2Q14181 598 aa17.79■□□□□ 0.44
RABGGTA-212ENST00000559974 DDIT3P35638 169 aa17.78■□□□□ 0.44
RABGGTA-212ENST00000559974 PPP1R42Q7Z4L9 355 aa17.78■□□□□ 0.44
RABGGTA-212ENST00000559974 CDCA7Q9BWT1 371 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-212ENST00000559974 RAB11FIP3O75154 756 aa17.77■□□□□ 0.44
RABGGTA-212ENST00000559974 REC8O95072 547 aa17.77■□□□□ 0.44
RABGGTA-212ENST00000559974 NBPF7P0C2Y1 421 aaPredicted RBP17.77■□□□□ 0.44
RABGGTA-212ENST00000559974 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
RABGGTA-212ENST00000559974 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
RABGGTA-212ENST00000559974 K7ELQ4 463 aaPredicted RBP17.77■□□□□ 0.43
RABGGTA-212ENST00000559974 CD2BP2O95400 341 aaKnown RBP17.77■□□□□ 0.43
RABGGTA-212ENST00000559974 RABEP1Q15276 862 aa17.77■□□□□ 0.43
RABGGTA-212ENST00000559974 STAP2Q9UGK3 403 aa17.77■□□□□ 0.43
RABGGTA-212ENST00000559974 ITGB4P16144 1822 aa17.77■□□□□ 0.43
RABGGTA-212ENST00000559974 ERC2O15083 957 aa17.76■□□□□ 0.43
RABGGTA-212ENST00000559974 PROSER3Q2NL68 480 aa17.76■□□□□ 0.43
RABGGTA-212ENST00000559974 KSR2Q6VAB6 950 aa17.76■□□□□ 0.43
RABGGTA-212ENST00000559974 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
RABGGTA-212ENST00000559974 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
RABGGTA-212ENST00000559974 HYPKQ9NX55 129 aa17.76■□□□□ 0.43
RABGGTA-212ENST00000559974 AOX1Q06278 1338 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 PRAMEF22A3QJZ6 481 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 TSHZ3Q63HK5 1081 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 MAP3K2Q9Y2U5 619 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 MRC1P22897 1456 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 ALDH1L1O75891 902 aa17.75■□□□□ 0.43
RABGGTA-212ENST00000559974 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
RABGGTA-212ENST00000559974 NKX1-1Q15270 411 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-212ENST00000559974 ZNF790Q6PG37 636 aa17.74■□□□□ 0.43
RABGGTA-212ENST00000559974 CIZ1Q9ULV3 898 aaPredicted RBP17.74■□□□□ 0.43
RABGGTA-212ENST00000559974 KCNQ2O43526 872 aa17.73■□□□□ 0.43
RABGGTA-212ENST00000559974 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
RABGGTA-212ENST00000559974 MCM4P33991 863 aa17.73■□□□□ 0.43
RABGGTA-212ENST00000559974 NFATC2IPQ8NCF5 419 aa17.73■□□□□ 0.43
RABGGTA-212ENST00000559974 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
RABGGTA-212ENST00000559974 SBF2Q86WG5 1849 aa17.72■□□□□ 0.43
RABGGTA-212ENST00000559974 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
RABGGTA-212ENST00000559974 DDX58O95786 925 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 MTX1Q13505 466 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 KIF1BPQ96EK5 621 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 HDAC5Q9UQL6 1122 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 PDIA6Q15084 440 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 HSP90AB4PQ58FF6 505 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 C9orf78Q9NZ63 289 aaPredicted RBP17.71■□□□□ 0.43
RABGGTA-212ENST00000559974 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 PRIM1P49642 420 aaKnown RBP17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 ESYT1Q9BSJ8 1104 aa17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 LAMB4A4D0S4 1761 aa17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
RABGGTA-212ENST00000559974 NUTM1Q86Y26 1132 aa17.69■□□□□ 0.42
RABGGTA-212ENST00000559974 CHMLP26374 656 aa17.68■□□□□ 0.42
RABGGTA-212ENST00000559974 CWF19L2Q2TBE0 894 aaKnown RBP17.68■□□□□ 0.42
RABGGTA-212ENST00000559974 PIGBQ92521 554 aa17.68■□□□□ 0.42
RABGGTA-212ENST00000559974 CABP4P57796 275 aa17.68■□□□□ 0.42
RABGGTA-212ENST00000559974 UTYO14607 1347 aa17.67■□□□□ 0.42
RABGGTA-212ENST00000559974 AIMP1Q12904 312 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-212ENST00000559974 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
RABGGTA-212ENST00000559974 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
RABGGTA-212ENST00000559974 AFDNP55196 1824 aaKnown RBP17.67■□□□□ 0.42
RABGGTA-212ENST00000559974 GRM8O00222 908 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 ST18O60284 1047 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 PI4K2BQ8TCG2 481 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 PAPPAQ13219 1627 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 ASAP1Q9ULH1 1129 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 NHSQ6T4R5 1651 aa17.66■□□□□ 0.42
RABGGTA-212ENST00000559974 BTAF1O14981 1849 aa17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 BCL9O00512 1426 aa17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 TNPO1Q92973 898 aaKnown RBP17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 ARFGEF2Q9Y6D5 1785 aa17.65■□□□□ 0.42
RABGGTA-212ENST00000559974 SNRPA1P09661 255 aaKnown RBP17.64■□□□□ 0.41
RABGGTA-212ENST00000559974 MYL6BP14649 208 aa17.64■□□□□ 0.41
RABGGTA-212ENST00000559974 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
RABGGTA-212ENST00000559974 MCCP23508 829 aa17.64■□□□□ 0.41
RABGGTA-212ENST00000559974 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
RABGGTA-212ENST00000559974 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
RABGGTA-212ENST00000559974 UBR2Q8IWV8 1755 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 IGKV5-2P06315 115 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 NEXNQ0ZGT2 675 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 XAGE3Q8WTP9 111 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 SUCLG2Q96I99 432 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
RABGGTA-212ENST00000559974 KAZALD1Q96I82 304 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
RABGGTA-212ENST00000559974 ANO2Q9NQ90 1003 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms