RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 PROSER3Q2NL68 480 aa20.47■□□□□ 0.87
PBX1-215ENST00000559240 PHAXQ9H814 394 aaKnown RBP20.47■□□□□ 0.87
PBX1-215ENST00000559240 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
PBX1-215ENST00000559240 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
PBX1-215ENST00000559240 COG6Q9Y2V7 657 aa20.47■□□□□ 0.87
PBX1-215ENST00000559240 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
PBX1-215ENST00000559240 DDX58O95786 925 aaKnown RBP20.46■□□□□ 0.87
PBX1-215ENST00000559240 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
PBX1-215ENST00000559240 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
PBX1-215ENST00000559240 DNAJC10Q8IXB1 793 aa20.46■□□□□ 0.87
PBX1-215ENST00000559240 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
PBX1-215ENST00000559240 KSR2Q6VAB6 950 aa20.46■□□□□ 0.87
PBX1-215ENST00000559240 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
PBX1-215ENST00000559240 FKBP5Q13451 457 aaPredicted RBP20.45■□□□□ 0.86
PBX1-215ENST00000559240 CLUAP1Q96AJ1 413 aa20.45■□□□□ 0.86
PBX1-215ENST00000559240 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.86
PBX1-215ENST00000559240 CNTNAP4Q9C0A0 1308 aa20.44■□□□□ 0.86
PBX1-215ENST00000559240 ZBTB7BO15156 539 aaPredicted RBP20.44■□□□□ 0.86
PBX1-215ENST00000559240 ZBTB40Q9NUA8 1239 aa20.43■□□□□ 0.86
PBX1-215ENST00000559240 KAT6BQ8WYB5 2073 aa20.43■□□□□ 0.86
PBX1-215ENST00000559240 RGL2O15211 777 aa20.43■□□□□ 0.86
PBX1-215ENST00000559240 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
PBX1-215ENST00000559240 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
PBX1-215ENST00000559240 RC3H1Q5TC82 1133 aaKnown RBP20.42■□□□□ 0.86
PBX1-215ENST00000559240 BCORQ6W2J9 1755 aa20.42■□□□□ 0.86
PBX1-215ENST00000559240 ITPRIPQ8IWB1 547 aa20.42■□□□□ 0.86
PBX1-215ENST00000559240 ANKRD36CQ5JPF3 1778 aa20.42■□□□□ 0.86
PBX1-215ENST00000559240 MYH14Q7Z406 1995 aaKnown RBP20.41■□□□□ 0.86
PBX1-215ENST00000559240 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
PBX1-215ENST00000559240 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
PBX1-215ENST00000559240 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
PBX1-215ENST00000559240 A1BGP04217 495 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 ITPK1Q13572 414 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 XAGE3Q8WTP9 111 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 C4BP0C0L5 1744 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 INTS5Q6P9B9 1019 aaKnown RBP20.4■□□□□ 0.86
PBX1-215ENST00000559240 COPS6Q7L5N1 327 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 PTF1AQ7RTS3 328 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
PBX1-215ENST00000559240 ANXA1P04083 346 aa20.39■□□□□ 0.85
PBX1-215ENST00000559240 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
PBX1-215ENST00000559240 SLC27A3Q5K4L6 730 aa20.39■□□□□ 0.85
PBX1-215ENST00000559240 FAM182BQ5T319 152 aa20.38■□□□□ 0.85
PBX1-215ENST00000559240 ANKRD13DQ6ZTN6 518 aa20.38■□□□□ 0.85
PBX1-215ENST00000559240 MYL6BP14649 208 aa20.38■□□□□ 0.85
PBX1-215ENST00000559240 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
PBX1-215ENST00000559240 SCN7AQ01118 1682 aa20.38■□□□□ 0.85
PBX1-215ENST00000559240 F6X3S4 739 aa20.37■□□□□ 0.85
PBX1-215ENST00000559240 PLSCR1O15162 318 aa20.37■□□□□ 0.85
PBX1-215ENST00000559240 LINS1Q8NG48 757 aa20.37■□□□□ 0.85
PBX1-215ENST00000559240 UTYO14607 1347 aa20.37■□□□□ 0.85
PBX1-215ENST00000559240 AFDNP55196 1824 aaKnown RBP20.37■□□□□ 0.85
PBX1-215ENST00000559240 EIF5P55010 431 aaKnown RBP20.37■□□□□ 0.85
PBX1-215ENST00000559240 SRCIN1Q9C0H9 1055 aa20.37■□□□□ 0.85
PBX1-215ENST00000559240 MAP3K2Q9Y2U5 619 aa20.37■□□□□ 0.85
PBX1-215ENST00000559240 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
PBX1-215ENST00000559240 ILDR1Q86SU0 546 aaPredicted RBP20.36■□□□□ 0.85
PBX1-215ENST00000559240 COL15A1P39059 1388 aa20.36■□□□□ 0.85
PBX1-215ENST00000559240 ERVV-1B6SEH8 477 aa20.36■□□□□ 0.85
PBX1-215ENST00000559240 ARXQ96QS3 562 aa20.35■□□□□ 0.85
PBX1-215ENST00000559240 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
PBX1-215ENST00000559240 GNAI3P08754 354 aa20.35■□□□□ 0.85
PBX1-215ENST00000559240 LINC00116Q8NCU8 138 aa20.35■□□□□ 0.85
PBX1-215ENST00000559240 DHX37Q8IY37 1157 aaKnown RBP20.34■□□□□ 0.85
PBX1-215ENST00000559240 NUP98P52948 1817 aa20.34■□□□□ 0.85
PBX1-215ENST00000559240 KDM2BQ8NHM5 1336 aa20.34■□□□□ 0.85
PBX1-215ENST00000559240 RIC3Q7Z5B4 369 aa20.34■□□□□ 0.85
PBX1-215ENST00000559240 MAP3K15Q6ZN16 1313 aa20.33■□□□□ 0.85
PBX1-215ENST00000559240 TRIM28Q13263 835 aaKnown RBP20.33■□□□□ 0.85
PBX1-215ENST00000559240 HDAC1Q13547 482 aaPredicted RBP20.33■□□□□ 0.85
PBX1-215ENST00000559240 CCNL1Q9UK58 526 aaPredicted RBP20.33■□□□□ 0.85
PBX1-215ENST00000559240 A0A087WZG4 1122 aa20.33■□□□□ 0.84
PBX1-215ENST00000559240 FRAT2O75474 233 aaPredicted RBP20.33■□□□□ 0.84
PBX1-215ENST00000559240 ZHX1Q9UKY1 873 aaPredicted RBP20.33■□□□□ 0.84
PBX1-215ENST00000559240 UBR3Q6ZT12 1888 aa20.33■□□□□ 0.84
PBX1-215ENST00000559240 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
PBX1-215ENST00000559240 TRIM37O94972 964 aa20.32■□□□□ 0.84
PBX1-215ENST00000559240 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
PBX1-215ENST00000559240 HDAC5Q9UQL6 1122 aa20.32■□□□□ 0.84
PBX1-215ENST00000559240 KIF6Q6ZMV9 814 aa20.32■□□□□ 0.84
PBX1-215ENST00000559240 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
PBX1-215ENST00000559240 TTLL7Q6ZT98 887 aa20.31■□□□□ 0.84
PBX1-215ENST00000559240 USP44Q9H0E7 712 aa20.31■□□□□ 0.84
PBX1-215ENST00000559240 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
PBX1-215ENST00000559240 PCDHB15Q9Y5E8 787 aa20.31■□□□□ 0.84
PBX1-215ENST00000559240 C4AP0C0L4 1744 aa20.31■□□□□ 0.84
PBX1-215ENST00000559240 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 PDCL3Q9H2J4 239 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 NEURL1BA8MQ27 555 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
PBX1-215ENST00000559240 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
PBX1-215ENST00000559240 PLCD3Q8N3E9 789 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 ISCA1Q9BUE6 129 aa20.3■□□□□ 0.84
PBX1-215ENST00000559240 GIGYF2Q6Y7W6 1299 aaKnown RBP20.29■□□□□ 0.84
PBX1-215ENST00000559240 RPAP2Q8IXW5 612 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms