RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 CGNL1Q0VF96 1302 aa9.31□□□□□ -0.92
MARK3-212ENST00000558223 ADGRB1O14514 1584 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 MAPK1P28482 360 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 USP46P62068 366 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 MTMR2Q13614 643 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 NOP9Q86U38 636 aaKnown RBP9.3□□□□□ -0.92
MARK3-212ENST00000558223 SLF2Q8IX21 1173 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 CDCA7Q9BWT1 371 aaPredicted RBP9.3□□□□□ -0.92
MARK3-212ENST00000558223 ESF1Q9H501 851 aaKnown RBP9.3□□□□□ -0.92
MARK3-212ENST00000558223 YEATS2Q9ULM3 1422 aa9.3□□□□□ -0.92
MARK3-212ENST00000558223 PPLO60437 1756 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 UGGT1Q9NYU2 1555 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 POLR3AO14802 1390 aaPredicted RBP9.29□□□□□ -0.92
MARK3-212ENST00000558223 ATAD2Q6PL18 1390 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 NBPF26B4DH59 902 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 PIK3CDO00329 1044 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 PLEKHM2Q8IWE5 1019 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.29□□□□□ -0.92
MARK3-212ENST00000558223 CFAP53Q96M91 514 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 TANGO6Q9C0B7 1094 aa9.29□□□□□ -0.92
MARK3-212ENST00000558223 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
MARK3-212ENST00000558223 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
MARK3-212ENST00000558223 NEXMIFQ5QGS0 1516 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 USP17L5A8MUK1 530 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 LZTS3O60299 673 aaPredicted RBP9.28□□□□□ -0.92
MARK3-212ENST00000558223 ABL1P00519 1130 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 RASA1P20936 1047 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 PPP4CP60510 307 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 CNGB1Q14028 1251 aaPredicted RBP9.28□□□□□ -0.92
MARK3-212ENST00000558223 CRTC2Q53ET0 693 aaPredicted RBP9.28□□□□□ -0.92
MARK3-212ENST00000558223 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
MARK3-212ENST00000558223 RCAN3Q9UKA8 241 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
MARK3-212ENST00000558223 SCAMP3O14828 347 aaKnown RBP9.27□□□□□ -0.93
MARK3-212ENST00000558223 HOXA2O43364 376 aa9.27□□□□□ -0.93
MARK3-212ENST00000558223 MARCH6O60337 910 aa9.27□□□□□ -0.93
MARK3-212ENST00000558223 NR6A1Q15406 480 aa9.27□□□□□ -0.93
MARK3-212ENST00000558223 BACH2Q9BYV9 841 aa9.27□□□□□ -0.93
MARK3-212ENST00000558223 ANKRD36BQ8N2N9 1353 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 DNAJB2P25686 324 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 NR1H3Q13133 447 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 PTK7Q13308 1070 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 EAPPQ56P03 285 aaPredicted RBP9.26□□□□□ -0.93
MARK3-212ENST00000558223 ZNF662Q6ZS27 426 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 MORC1Q86VD1 984 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 DEPDC4Q8N2C3 294 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 PIK3R5Q8WYR1 880 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 PNNQ9H307 717 aaKnown RBP9.26□□□□□ -0.93
MARK3-212ENST00000558223 TERF2IPQ9NYB0 399 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 EGFL7Q9UHF1 273 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 MROH2AA6NES4 1674 aa9.26□□□□□ -0.93
MARK3-212ENST00000558223 H3BRB1 525 aa9.25□□□□□ -0.93
MARK3-212ENST00000558223 RRP1P56182 461 aaKnown RBP9.25□□□□□ -0.93
MARK3-212ENST00000558223 SWI5Q1ZZU3 235 aa9.25□□□□□ -0.93
MARK3-212ENST00000558223 ANKMY2Q8IV38 441 aa9.25□□□□□ -0.93
MARK3-212ENST00000558223 GLYCTKQ8IVS8 523 aa9.25□□□□□ -0.93
MARK3-212ENST00000558223 EYA1Q99502 592 aa9.25□□□□□ -0.93
MARK3-212ENST00000558223 DNAJC2Q99543 621 aaKnown RBP9.25□□□□□ -0.93
MARK3-212ENST00000558223 TUT1Q9H6E5 874 aaKnown RBP9.25□□□□□ -0.93
MARK3-212ENST00000558223 USP32Q8NFA0 1604 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 SCNN1AP37088 669 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 HDLBPQ00341 1268 aaKnown RBP9.24□□□□□ -0.93
MARK3-212ENST00000558223 KCNC4Q03721 635 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 COL19A1Q14993 1142 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 C9orf131Q5VYM1 1079 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 CCDC136Q96JN2 1154 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 PSMD1Q99460 953 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 CUEDC1Q9NWM3 386 aaPredicted RBP9.24□□□□□ -0.93
MARK3-212ENST00000558223 POGKQ9P215 609 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 DCTN4Q9UJW0 460 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 PCDHGC3Q9UN70 934 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 SPATA31D1Q6ZQQ2 1576 aa9.24□□□□□ -0.93
MARK3-212ENST00000558223 TMEM131LA2VDJ0 1609 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 PREX1Q8TCU6 1659 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 DLC1Q96QB1 1528 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 CFAP99D6REC4 459 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 AAMPQ13685 434 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
MARK3-212ENST00000558223 CARD14Q9BXL6 1004 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 BRPF3Q9ULD4 1205 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 ABCC11Q96J66 1382 aa9.23□□□□□ -0.93
MARK3-212ENST00000558223 YTHDC2Q9H6S0 1430 aaKnown RBP9.22□□□□□ -0.93
MARK3-212ENST00000558223 MED14O60244 1454 aa9.22□□□□□ -0.93
MARK3-212ENST00000558223 GUCA2AQ02747 115 aa9.22□□□□□ -0.93
MARK3-212ENST00000558223 ZNF211Q13398 564 aaPredicted RBP9.22□□□□□ -0.93
MARK3-212ENST00000558223 TMEM132EQ6IEE7 984 aa9.22□□□□□ -0.93
MARK3-212ENST00000558223 ZNF521Q96K83 1311 aa9.22□□□□□ -0.93
MARK3-212ENST00000558223 NSD3Q9BZ95 1437 aa9.22□□□□□ -0.93
MARK3-212ENST00000558223 ARHGEF40Q8TER5 1519 aa9.21□□□□□ -0.93
MARK3-212ENST00000558223 MYOM1P52179 1685 aa9.21□□□□□ -0.93
MARK3-212ENST00000558223 TLDC2A0PJX2 215 aa9.21□□□□□ -0.94
MARK3-212ENST00000558223 C6orf229H3BNL8 230 aa9.21□□□□□ -0.94
MARK3-212ENST00000558223 ATP2B1P20020 1258 aa9.21□□□□□ -0.94
MARK3-212ENST00000558223 SWT1Q5T5J6 900 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms