RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
SPG11-207ENST00000558138 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
SPG11-207ENST00000558138 ST5P78524 1137 aa11.58□□□□□ -0.56
SPG11-207ENST00000558138 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
SPG11-207ENST00000558138 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
SPG11-207ENST00000558138 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
SPG11-207ENST00000558138 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
SPG11-207ENST00000558138 DBF4Q9UBU7 674 aaPredicted RBP11.58□□□□□ -0.56
SPG11-207ENST00000558138 IL16Q14005 1332 aa11.58□□□□□ -0.56
SPG11-207ENST00000558138 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.56
SPG11-207ENST00000558138 TM4SF1P30408 202 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 PROSER3Q2NL68 480 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 CCDC30Q5VVM6 783 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 CLEC4GQ6UXB4 293 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 COPS6Q7L5N1 327 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 XAGE3Q8WTP9 111 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPG11-207ENST00000558138 C10orf71Q711Q0 1435 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 FANCIQ9NVI1 1328 aa11.57□□□□□ -0.56
SPG11-207ENST00000558138 A0A0G2JLW4 131 aa11.56□□□□□ -0.56
SPG11-207ENST00000558138 GPTP24298 496 aa11.56□□□□□ -0.56
SPG11-207ENST00000558138 HLFQ16534 295 aa11.56□□□□□ -0.56
SPG11-207ENST00000558138 TWISTNBQ3B726 338 aaPredicted RBP11.56□□□□□ -0.56
SPG11-207ENST00000558138 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
SPG11-207ENST00000558138 C8orf58Q8NAV2 365 aa11.56□□□□□ -0.56
SPG11-207ENST00000558138 HYPKQ9NX55 129 aa11.56□□□□□ -0.56
SPG11-207ENST00000558138 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
SPG11-207ENST00000558138 TCERG1O14776 1098 aaKnown RBP11.55□□□□□ -0.56
SPG11-207ENST00000558138 TGFB2P61812 414 aa11.55□□□□□ -0.56
SPG11-207ENST00000558138 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
SPG11-207ENST00000558138 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
SPG11-207ENST00000558138 N4BP2Q86UW6 1770 aaPredicted RBP11.54□□□□□ -0.56
SPG11-207ENST00000558138 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
SPG11-207ENST00000558138 DPEP1P16444 411 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 CHRNA5P30532 468 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 PDE6BP35913 854 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 PDIA6Q15084 440 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 HSP90AB3PQ58FF7 597 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 C2CD5Q86YS7 1000 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 NYXQ9GZU5 481 aa11.54□□□□□ -0.56
SPG11-207ENST00000558138 PXDNLA1KZ92 1463 aa11.53□□□□□ -0.56
SPG11-207ENST00000558138 H0YIN7 160 aa11.53□□□□□ -0.56
SPG11-207ENST00000558138 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
SPG11-207ENST00000558138 DDX58O95786 925 aaKnown RBP11.53□□□□□ -0.56
SPG11-207ENST00000558138 EXOSC9Q06265 439 aaKnown RBP11.53□□□□□ -0.56
SPG11-207ENST00000558138 PRR5LQ6MZQ0 368 aa11.53□□□□□ -0.56
SPG11-207ENST00000558138 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
SPG11-207ENST00000558138 PPP1R42Q7Z4L9 355 aa11.53□□□□□ -0.56
SPG11-207ENST00000558138 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPG11-207ENST00000558138 NUP98P52948 1817 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 KIF13BQ9NQT8 1826 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 E9PSI1 815 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 RGL2O15211 777 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 HNRNPUQ00839 825 aaKnown RBP eCLIP11.52□□□□□ -0.57
SPG11-207ENST00000558138 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 PLBD2Q8NHP8 589 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 PIM2Q9P1W9 311 aa11.52□□□□□ -0.57
SPG11-207ENST00000558138 YBX3P16989 372 aaKnown RBP eCLIP11.51□□□□□ -0.57
SPG11-207ENST00000558138 PARP10Q53GL7 1025 aa11.51□□□□□ -0.57
SPG11-207ENST00000558138 DALRD3Q5D0E6 543 aaKnown RBP11.51□□□□□ -0.57
SPG11-207ENST00000558138 NUTM1Q86Y26 1132 aa11.51□□□□□ -0.57
SPG11-207ENST00000558138 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
SPG11-207ENST00000558138 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
SPG11-207ENST00000558138 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
SPG11-207ENST00000558138 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
SPG11-207ENST00000558138 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
SPG11-207ENST00000558138 SLC4A2P04920 1241 aa11.5□□□□□ -0.57
SPG11-207ENST00000558138 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
SPG11-207ENST00000558138 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
SPG11-207ENST00000558138 PDZRN3Q9UPQ7 1066 aa11.5□□□□□ -0.57
SPG11-207ENST00000558138 ATP5J2-PTCD1G3V325 749 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 YY1P25490 414 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 NEXNQ0ZGT2 675 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 FKBP5Q13451 457 aaPredicted RBP11.49□□□□□ -0.57
SPG11-207ENST00000558138 TCIRG1Q13488 830 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 ARHGAP27Q6ZUM4 889 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 LRP10Q7Z4F1 713 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 MYD88Q99836 296 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
SPG11-207ENST00000558138 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
SPG11-207ENST00000558138 UBN2Q6ZU65 1347 aa11.49□□□□□ -0.57
SPG11-207ENST00000558138 VAMP4O75379 141 aa11.48□□□□□ -0.57
SPG11-207ENST00000558138 ERFEQ4G0M1 354 aa11.48□□□□□ -0.57
SPG11-207ENST00000558138 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
SPG11-207ENST00000558138 TTLL6Q8N841 843 aa11.48□□□□□ -0.57
SPG11-207ENST00000558138 RPGRQ92834 1020 aaKnown RBP11.48□□□□□ -0.57
SPG11-207ENST00000558138 ZNF521Q96K83 1311 aa11.48□□□□□ -0.57
SPG11-207ENST00000558138 ANKRD36CQ5JPF3 1778 aa11.48□□□□□ -0.57
SPG11-207ENST00000558138 ARFGEF2Q9Y6D5 1785 aa11.47□□□□□ -0.57
SPG11-207ENST00000558138 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
SPG11-207ENST00000558138 CNKSR1Q969H4 720 aa11.47□□□□□ -0.57
SPG11-207ENST00000558138 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
SPG11-207ENST00000558138 MASTLQ96GX5 879 aa11.47□□□□□ -0.57
SPG11-207ENST00000558138 MAP3K2Q9Y2U5 619 aa11.47□□□□□ -0.57
SPG11-207ENST00000558138 ANKRD31Q8N7Z5 1873 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms