RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TM4SF1P30408 202 aa16.25■□□□□ 0.19
SLIRP-211ENST00000557623 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
SLIRP-211ENST00000557623 CHADLQ6NUI6 762 aa16.25■□□□□ 0.19
SLIRP-211ENST00000557623 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
SLIRP-211ENST00000557623 DZIP3Q86Y13 1208 aaKnown RBP16.25■□□□□ 0.19
SLIRP-211ENST00000557623 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
SLIRP-211ENST00000557623 TBC1D2BQ9UPU7 963 aa16.25■□□□□ 0.19
SLIRP-211ENST00000557623 HOXB7P09629 217 aa16.24■□□□□ 0.19
SLIRP-211ENST00000557623 WWC1Q8IX03 1113 aa16.24■□□□□ 0.19
SLIRP-211ENST00000557623 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
SLIRP-211ENST00000557623 BCL2L12Q9HB09 334 aa16.24■□□□□ 0.19
SLIRP-211ENST00000557623 MBIPQ9NS73 344 aa16.24■□□□□ 0.19
SLIRP-211ENST00000557623 NRXN2Q9P2S2 1712 aa16.24■□□□□ 0.19
SLIRP-211ENST00000557623 RGL2O15211 777 aa16.23■□□□□ 0.19
SLIRP-211ENST00000557623 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
SLIRP-211ENST00000557623 NFIXQ14938 502 aa16.23■□□□□ 0.19
SLIRP-211ENST00000557623 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
SLIRP-211ENST00000557623 ZNF652Q9Y2D9 606 aa16.23■□□□□ 0.19
SLIRP-211ENST00000557623 NUP98P52948 1817 aa16.23■□□□□ 0.19
SLIRP-211ENST00000557623 C10orf71Q711Q0 1435 aa16.22■□□□□ 0.19
SLIRP-211ENST00000557623 POLRMTO00411 1230 aaKnown RBP16.22■□□□□ 0.19
SLIRP-211ENST00000557623 CAMTA2O94983 1202 aa16.22■□□□□ 0.19
SLIRP-211ENST00000557623 CLEC4GQ6UXB4 293 aa16.22■□□□□ 0.19
SLIRP-211ENST00000557623 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
SLIRP-211ENST00000557623 N4BP2Q86UW6 1770 aaPredicted RBP16.22■□□□□ 0.19
SLIRP-211ENST00000557623 IL16Q14005 1332 aa16.21■□□□□ 0.19
SLIRP-211ENST00000557623 DDR1Q08345 913 aa16.21■□□□□ 0.19
SLIRP-211ENST00000557623 KIAA1551Q9HCM1 1747 aa16.21■□□□□ 0.19
SLIRP-211ENST00000557623 MYL6BP14649 208 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 TGFB2P61812 414 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 TBC1D9BQ66K14 1250 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 WDR63Q8IWG1 891 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 CREBZFQ9NS37 354 aa16.2■□□□□ 0.18
SLIRP-211ENST00000557623 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 SENP3-EIF4A1A0A087X0R7 540 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 SERPINB2P05120 415 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 DUSP27Q5VZP5 1158 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 BICDL1Q6ZP65 573 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 MIER1Q8N108 512 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 CHD4Q14839 1912 aa16.19■□□□□ 0.18
SLIRP-211ENST00000557623 BRCA1P38398 1863 aaKnown RBP16.18■□□□□ 0.18
SLIRP-211ENST00000557623 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
SLIRP-211ENST00000557623 GPR162Q16538 588 aa16.18■□□□□ 0.18
SLIRP-211ENST00000557623 HDGFL1Q5TGJ6 251 aa16.18■□□□□ 0.18
SLIRP-211ENST00000557623 DDX21Q9NR30 783 aaKnown RBP eCLIP16.18■□□□□ 0.18
SLIRP-211ENST00000557623 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
SLIRP-211ENST00000557623 MAP3K15Q6ZN16 1313 aa16.18■□□□□ 0.18
SLIRP-211ENST00000557623 PDIA6Q15084 440 aa16.17■□□□□ 0.18
SLIRP-211ENST00000557623 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
SLIRP-211ENST00000557623 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
SLIRP-211ENST00000557623 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
SLIRP-211ENST00000557623 ANKRD36CQ5JPF3 1778 aa16.16■□□□□ 0.18
SLIRP-211ENST00000557623 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
SLIRP-211ENST00000557623 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
SLIRP-211ENST00000557623 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
SLIRP-211ENST00000557623 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
SLIRP-211ENST00000557623 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
SLIRP-211ENST00000557623 LRP10Q7Z4F1 713 aa16.15■□□□□ 0.18
SLIRP-211ENST00000557623 ANKRD31Q8N7Z5 1873 aa16.15■□□□□ 0.18
SLIRP-211ENST00000557623 NPHP1O15259 732 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 HLFQ16534 295 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 C8orf58Q8NAV2 365 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.17
SLIRP-211ENST00000557623 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
SLIRP-211ENST00000557623 ARFGEF1Q9Y6D6 1849 aa16.14■□□□□ 0.17
SLIRP-211ENST00000557623 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 A0A0G2JLW4 131 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
SLIRP-211ENST00000557623 ANXA1P04083 346 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 ST5P78524 1137 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 COPS6Q7L5N1 327 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 CNBD1Q8NA66 436 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 HYPKQ9NX55 129 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 PDZRN3Q9UPQ7 1066 aa16.13■□□□□ 0.17
SLIRP-211ENST00000557623 DPEP1P16444 411 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 CCDC30Q5VVM6 783 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
SLIRP-211ENST00000557623 NBPF5PQ86XG9 351 aaPredicted RBP16.12■□□□□ 0.17
SLIRP-211ENST00000557623 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 FARP1Q9Y4F1 1045 aaPredicted RBP16.12■□□□□ 0.17
SLIRP-211ENST00000557623 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
SLIRP-211ENST00000557623 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
SLIRP-211ENST00000557623 PDE6BP35913 854 aa16.11■□□□□ 0.17
SLIRP-211ENST00000557623 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
SLIRP-211ENST00000557623 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
SLIRP-211ENST00000557623 BRIP1Q9BX63 1249 aa16.11■□□□□ 0.17
SLIRP-211ENST00000557623 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
SLIRP-211ENST00000557623 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
SLIRP-211ENST00000557623 VASPP50552 380 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms