RNA–Protein interactions for RNA: ENST00000557597.5

NUMB-229, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUMB, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-229ENST00000557597 KIAA2012Q0VF49 1180 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 ZKSCAN2Q63HK3 967 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
NUMB-229ENST00000557597 KIF13BQ9NQT8 1826 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 HOXC9P31274 260 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
NUMB-229ENST00000557597 CDCA8Q53HL2 280 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 CHAMP1Q96JM3 812 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 SMC4Q9NTJ3 1288 aa8.4□□□□□ -1.06
NUMB-229ENST00000557597 CGNQ9P2M7 1197 aaKnown RBP8.4□□□□□ -1.06
NUMB-229ENST00000557597 AK9Q5TCS8 1911 aa8.4□□□□□ -1.07
NUMB-229ENST00000557597 ATP10DQ9P241 1426 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 ZNF445P59923 1031 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 ATP2B3Q16720 1220 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.39□□□□□ -1.071e-7■■□□□ 14.4
NUMB-229ENST00000557597 UBR3Q6ZT12 1888 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
NUMB-229ENST00000557597 AMPHP49418 695 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 PKP1Q13835 747 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 ZNF771Q7L3S4 317 aaPredicted RBP8.39□□□□□ -1.07
NUMB-229ENST00000557597 C17orf53Q8N3J3 647 aaPredicted RBP8.39□□□□□ -1.07
NUMB-229ENST00000557597 MEGF6O75095 1541 aa8.39□□□□□ -1.07
NUMB-229ENST00000557597 MAP3K19Q56UN5 1328 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 ZBTB22O15209 634 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
NUMB-229ENST00000557597 PLCB2Q00722 1185 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 RAPGEF4Q8WZA2 1011 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 RGPD2P0DJD1 1756 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 GTPBP4Q9BZE4 634 aaKnown RBP8.38□□□□□ -1.07
NUMB-229ENST00000557597 ITGB4P16144 1822 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 FLT4P35916 1363 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 SOX12O15370 315 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 PDLIM2Q96JY6 352 aa8.38□□□□□ -1.07
NUMB-229ENST00000557597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.38□□□□□ -1.071e-6■□□□□ 10.1
NUMB-229ENST00000557597 KAT6BQ8WYB5 2073 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
NUMB-229ENST00000557597 ANKRD45Q5TZF3 282 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
NUMB-229ENST00000557597 MYRIPQ8NFW9 859 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 TSR2Q969E8 191 aaKnown RBP8.37□□□□□ -1.07
NUMB-229ENST00000557597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
NUMB-229ENST00000557597 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
NUMB-229ENST00000557597 KIF20AO95235 890 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 HSPA6P17066 643 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 MCM5P33992 734 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
NUMB-229ENST00000557597 LMBRD1Q9NUN5 540 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 KIF16BQ96L93 1317 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 NKX1-1Q15270 411 aaPredicted RBP8.37□□□□□ -1.07
NUMB-229ENST00000557597 ZNF710Q8N1W2 664 aa8.37□□□□□ -1.07
NUMB-229ENST00000557597 KIF2CQ99661 725 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 KIF3AQ9Y496 699 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 TOGARAM1Q9Y4F4 1720 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
NUMB-229ENST00000557597 PALLDQ8WX93 1383 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 COL23A1Q86Y22 540 aaPredicted RBP8.36□□□□□ -1.07
NUMB-229ENST00000557597 PDCL2Q8N4E4 241 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 IBTKQ9P2D0 1353 aaPredicted RBP8.36□□□□□ -1.07
NUMB-229ENST00000557597 U2AF2P26368 475 aaKnown RBP eCLIP8.36□□□□□ -1.074e-7■□□□□ 9.6
NUMB-229ENST00000557597 NUCB2P80303 420 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 GPT2Q8TD30 523 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
NUMB-229ENST00000557597 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 DDX19BQ9UMR2 479 aa8.36□□□□□ -1.07
NUMB-229ENST00000557597 TRIM27P14373 513 aa8.35□□□□□ -1.07
NUMB-229ENST00000557597 SLC12A5Q9H2X9 1139 aa8.35□□□□□ -1.07
NUMB-229ENST00000557597 HMGN5P82970 282 aaKnown RBP8.35□□□□□ -1.07
NUMB-229ENST00000557597 LRSAM1Q6UWE0 723 aa8.35□□□□□ -1.07
NUMB-229ENST00000557597 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
NUMB-229ENST00000557597 AK7Q96M32 723 aa8.35□□□□□ -1.07
NUMB-229ENST00000557597 TTC12Q9H892 705 aaPredicted RBP8.35□□□□□ -1.07
NUMB-229ENST00000557597 APLP1P51693 650 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 CHD1LQ86WJ1 897 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 NLGN2Q8NFZ4 835 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 NSFL1CQ9UNZ2 370 aaKnown RBP8.34□□□□□ -1.07
NUMB-229ENST00000557597 SPG7Q9UQ90 795 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 NPC1L1Q9UHC9 1359 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 YBX3P16989 372 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUMB-229ENST00000557597 HDAC1Q13547 482 aaPredicted RBP8.34□□□□□ -1.07
NUMB-229ENST00000557597 TMEM57Q8N5G2 664 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 NGEFQ8N5V2 710 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 TMEM51Q9NW97 253 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 ARFGEF1Q9Y6D6 1849 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 TGFB2P61812 414 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUMB-229ENST00000557597 ZGPATQ8N5A5 531 aaKnown RBP8.34□□□□□ -1.07
NUMB-229ENST00000557597 SYTL4Q96C24 671 aaPredicted RBP8.34□□□□□ -1.07
NUMB-229ENST00000557597 BCL2L12Q9HB09 334 aa8.34□□□□□ -1.07
NUMB-229ENST00000557597 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.08
NUMB-229ENST00000557597 MORC1Q86VD1 984 aa8.33□□□□□ -1.08
NUMB-229ENST00000557597 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
NUMB-229ENST00000557597 EXOSC9Q06265 439 aaKnown RBP8.33□□□□□ -1.08
NUMB-229ENST00000557597 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
NUMB-229ENST00000557597 CHAF1AQ13111 956 aaPredicted RBP8.33□□□□□ -1.08
NUMB-229ENST00000557597 TSPY26PQ9H489 355 aa8.33□□□□□ -1.08
NUMB-229ENST00000557597 USP25Q9UHP3 1055 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms