RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 RNF123Q5XPI4 1314 aa21.03■□□□□ 0.96
PCNX4-213ENST00000556907 MAP3K15Q6ZN16 1313 aa21.02■□□□□ 0.95
PCNX4-213ENST00000556907 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
PCNX4-213ENST00000556907 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
PCNX4-213ENST00000556907 SGIP1Q9BQI5 828 aa21.01■□□□□ 0.95
PCNX4-213ENST00000556907 LRP5O75197 1615 aa21■□□□□ 0.95
PCNX4-213ENST00000556907 SCN7AQ01118 1682 aa21■□□□□ 0.95
PCNX4-213ENST00000556907 PTGER2P43116 358 aa21■□□□□ 0.95
PCNX4-213ENST00000556907 XAGE3Q8WTP9 111 aa21■□□□□ 0.95
PCNX4-213ENST00000556907 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
PCNX4-213ENST00000556907 ANXA1P04083 346 aa20.99■□□□□ 0.95
PCNX4-213ENST00000556907 SLC4A2P04920 1241 aa20.99■□□□□ 0.95
PCNX4-213ENST00000556907 TM4SF1P30408 202 aa20.99■□□□□ 0.95
PCNX4-213ENST00000556907 FKBP8Q14318 412 aa20.99■□□□□ 0.95
PCNX4-213ENST00000556907 BCL2L12Q9HB09 334 aa20.99■□□□□ 0.95
PCNX4-213ENST00000556907 BCORQ6W2J9 1755 aa20.99■□□□□ 0.95
PCNX4-213ENST00000556907 ALDH1L2Q3SY69 923 aa20.98■□□□□ 0.95
PCNX4-213ENST00000556907 HSP90AB3PQ58FF7 597 aa20.98■□□□□ 0.95
PCNX4-213ENST00000556907 MSL1Q68DK7 614 aa20.98■□□□□ 0.95
PCNX4-213ENST00000556907 TTLL7Q6ZT98 887 aa20.98■□□□□ 0.95
PCNX4-213ENST00000556907 ANKRD13DQ6ZTN6 518 aa20.98■□□□□ 0.95
PCNX4-213ENST00000556907 MMP10P09238 476 aa20.97■□□□□ 0.95
PCNX4-213ENST00000556907 AIMP1Q12904 312 aaKnown RBP20.97■□□□□ 0.95
PCNX4-213ENST00000556907 GIGYF2Q6Y7W6 1299 aaKnown RBP20.97■□□□□ 0.95
PCNX4-213ENST00000556907 PLBD2Q8NHP8 589 aa20.97■□□□□ 0.95
PCNX4-213ENST00000556907 PARP3Q9Y6F1 533 aa20.97■□□□□ 0.95
PCNX4-213ENST00000556907 SETDB2Q96T68 719 aa20.96■□□□□ 0.95
PCNX4-213ENST00000556907 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
PCNX4-213ENST00000556907 NFIXQ14938 502 aa20.95■□□□□ 0.94
PCNX4-213ENST00000556907 PPP1R1BQ9UD71 204 aaPredicted RBP20.95■□□□□ 0.94
PCNX4-213ENST00000556907 RRP1P56182 461 aaKnown RBP20.94■□□□□ 0.94
PCNX4-213ENST00000556907 ZBTB3Q9H5J0 574 aa20.94■□□□□ 0.94
PCNX4-213ENST00000556907 PHAXQ9H814 394 aaKnown RBP20.94■□□□□ 0.94
PCNX4-213ENST00000556907 NUP98P52948 1817 aa20.94■□□□□ 0.94
PCNX4-213ENST00000556907 ATP10DQ9P241 1426 aa20.94■□□□□ 0.94
PCNX4-213ENST00000556907 RARSP54136 660 aaKnown RBP20.93■□□□□ 0.94
PCNX4-213ENST00000556907 HLFQ16534 295 aa20.93■□□□□ 0.94
PCNX4-213ENST00000556907 TBC1D9BQ66K14 1250 aa20.93■□□□□ 0.94
PCNX4-213ENST00000556907 RIC3Q7Z5B4 369 aa20.93■□□□□ 0.94
PCNX4-213ENST00000556907 CARMIL3Q8ND23 1372 aa20.93■□□□□ 0.94
PCNX4-213ENST00000556907 POLRMTO00411 1230 aaKnown RBP20.92■□□□□ 0.94
PCNX4-213ENST00000556907 FLIIQ13045 1269 aa20.92■□□□□ 0.94
PCNX4-213ENST00000556907 TCIRG1Q13488 830 aa20.92■□□□□ 0.94
PCNX4-213ENST00000556907 KSR2Q6VAB6 950 aa20.92■□□□□ 0.94
PCNX4-213ENST00000556907 NIP7Q9Y221 180 aaKnown RBP eCLIP20.92■□□□□ 0.94
PCNX4-213ENST00000556907 TCERG1O14776 1098 aaKnown RBP20.91■□□□□ 0.94
PCNX4-213ENST00000556907 BRPF1P55201 1214 aaPredicted RBP20.91■□□□□ 0.94
PCNX4-213ENST00000556907 PARP10Q53GL7 1025 aa20.91■□□□□ 0.94
PCNX4-213ENST00000556907 ZNF34Q8IZ26 560 aa20.91■□□□□ 0.94
PCNX4-213ENST00000556907 SERPINB2P05120 415 aa20.9■□□□□ 0.94
PCNX4-213ENST00000556907 DDR1Q08345 913 aa20.9■□□□□ 0.94
PCNX4-213ENST00000556907 MRPL50Q8N5N7 158 aaKnown RBP20.9■□□□□ 0.94
PCNX4-213ENST00000556907 SSH1Q8WYL5 1049 aa20.9■□□□□ 0.94
PCNX4-213ENST00000556907 TRIM28Q13263 835 aaKnown RBP20.89■□□□□ 0.93
PCNX4-213ENST00000556907 FKBP5Q13451 457 aaPredicted RBP20.89■□□□□ 0.93
PCNX4-213ENST00000556907 TPTE2Q6XPS3 522 aa20.89■□□□□ 0.93
PCNX4-213ENST00000556907 BICDL1Q6ZP65 573 aa20.89■□□□□ 0.93
PCNX4-213ENST00000556907 NYXQ9GZU5 481 aa20.89■□□□□ 0.93
PCNX4-213ENST00000556907 CD2APQ9Y5K6 639 aa20.89■□□□□ 0.93
PCNX4-213ENST00000556907 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
PCNX4-213ENST00000556907 PTPRCP08575 1304 aa20.88■□□□□ 0.93
PCNX4-213ENST00000556907 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
PCNX4-213ENST00000556907 G2E3Q7L622 706 aa20.88■□□□□ 0.93
PCNX4-213ENST00000556907 PPP1R42Q7Z4L9 355 aa20.88■□□□□ 0.93
PCNX4-213ENST00000556907 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
PCNX4-213ENST00000556907 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
PCNX4-213ENST00000556907 KIF16BQ96L93 1317 aa20.87■□□□□ 0.93
PCNX4-213ENST00000556907 NEFLP07196 543 aa20.87■□□□□ 0.93
PCNX4-213ENST00000556907 NEXNQ0ZGT2 675 aa20.87■□□□□ 0.93
PCNX4-213ENST00000556907 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.87■□□□□ 0.93
PCNX4-213ENST00000556907 METTL22Q9BUU2 404 aaPredicted RBP20.87■□□□□ 0.93
PCNX4-213ENST00000556907 NRXN2Q9P2S2 1712 aa20.87■□□□□ 0.93
PCNX4-213ENST00000556907 BCAR3O75815 825 aa20.86■□□□□ 0.93
PCNX4-213ENST00000556907 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
PCNX4-213ENST00000556907 ISCA1Q9BUE6 129 aa20.86■□□□□ 0.93
PCNX4-213ENST00000556907 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
PCNX4-213ENST00000556907 MAP3K2Q9Y2U5 619 aa20.86■□□□□ 0.93
PCNX4-213ENST00000556907 ANKRD36CQ5JPF3 1778 aa20.86■□□□□ 0.93
PCNX4-213ENST00000556907 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
PCNX4-213ENST00000556907 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
PCNX4-213ENST00000556907 ADCY9O60503 1353 aa20.85■□□□□ 0.93
PCNX4-213ENST00000556907 AFDNP55196 1824 aaKnown RBP20.84■□□□□ 0.93
PCNX4-213ENST00000556907 NPHP1O15259 732 aa20.84■□□□□ 0.93
PCNX4-213ENST00000556907 GPTP24298 496 aa20.84■□□□□ 0.93
PCNX4-213ENST00000556907 TGFB2P61812 414 aa20.84■□□□□ 0.93
PCNX4-213ENST00000556907 ST5P78524 1137 aa20.84■□□□□ 0.93
PCNX4-213ENST00000556907 DNAAF4Q8WXU2 420 aa20.84■□□□□ 0.93
PCNX4-213ENST00000556907 GTF2E1P29083 439 aaPredicted RBP20.83■□□□□ 0.93
PCNX4-213ENST00000556907 PRR5LQ6MZQ0 368 aa20.83■□□□□ 0.93
PCNX4-213ENST00000556907 NLRP10Q86W26 655 aa20.83■□□□□ 0.93
PCNX4-213ENST00000556907 CCDC191Q8NCU4 936 aa20.83■□□□□ 0.93
PCNX4-213ENST00000556907 ARHGAP45Q92619 1136 aa20.83■□□□□ 0.93
PCNX4-213ENST00000556907 UTP14AQ9BVJ6 771 aaKnown RBP20.83■□□□□ 0.93
PCNX4-213ENST00000556907 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
PCNX4-213ENST00000556907 FHDC1Q9C0D6 1143 aaPredicted RBP20.83■□□□□ 0.93
PCNX4-213ENST00000556907 C10orf71Q711Q0 1435 aa20.83■□□□□ 0.93
PCNX4-213ENST00000556907 KIF13BQ9NQT8 1826 aa20.83■□□□□ 0.92
PCNX4-213ENST00000556907 UBN2Q6ZU65 1347 aa20.82■□□□□ 0.92
PCNX4-213ENST00000556907 IPO8O15397 1037 aaKnown RBP20.82■□□□□ 0.92
PCNX4-213ENST00000556907 SUSD4Q5VX71 490 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms