RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 IFT57Q9NWB7 429 aa29.26■■■□□ 2.27
PABPN1-206ENST00000556809 WWC3Q9ULE0 1092 aa29.26■■■□□ 2.27
PABPN1-206ENST00000556809 CARMIL3Q8ND23 1372 aa29.26■■■□□ 2.27
PABPN1-206ENST00000556809 MYL6BP14649 208 aa29.24■■■□□ 2.27
PABPN1-206ENST00000556809 EIF2S2P20042 333 aaKnown RBP29.24■■■□□ 2.27
PABPN1-206ENST00000556809 ANKRD31Q8N7Z5 1873 aa29.24■■■□□ 2.27
PABPN1-206ENST00000556809 SETDB2Q96T68 719 aa29.24■■■□□ 2.27
PABPN1-206ENST00000556809 NUP98P52948 1817 aa29.24■■■□□ 2.27
PABPN1-206ENST00000556809 GNAI1P63096 354 aa29.23■■■□□ 2.27
PABPN1-206ENST00000556809 HLFQ16534 295 aa29.23■■■□□ 2.27
PABPN1-206ENST00000556809 TTLL7Q6ZT98 887 aa29.23■■■□□ 2.27
PABPN1-206ENST00000556809 ZNF652Q9Y2D9 606 aa29.23■■■□□ 2.27
PABPN1-206ENST00000556809 ERVV-1B6SEH8 477 aa29.22■■■□□ 2.27
PABPN1-206ENST00000556809 PRR5LQ6MZQ0 368 aa29.22■■■□□ 2.27
PABPN1-206ENST00000556809 DLEC1Q9Y238 1755 aa29.21■■■□□ 2.27
PABPN1-206ENST00000556809 HOXB7P09629 217 aa29.21■■■□□ 2.27
PABPN1-206ENST00000556809 CHRNA5P30532 468 aa29.21■■■□□ 2.27
PABPN1-206ENST00000556809 PROSER3Q2NL68 480 aa29.21■■■□□ 2.27
PABPN1-206ENST00000556809 MAP3K15Q6ZN16 1313 aa29.2■■■□□ 2.27
PABPN1-206ENST00000556809 ARFGEF1Q9Y6D6 1849 aa29.2■■■□□ 2.27
PABPN1-206ENST00000556809 IL16Q14005 1332 aa29.2■■■□□ 2.26
PABPN1-206ENST00000556809 WDR63Q8IWG1 891 aa29.19■■■□□ 2.26
PABPN1-206ENST00000556809 PIM2Q9P1W9 311 aa29.18■■■□□ 2.26
PABPN1-206ENST00000556809 BCS1LQ9Y276 419 aa29.18■■■□□ 2.26
PABPN1-206ENST00000556809 ANXA1P04083 346 aa29.17■■■□□ 2.26
PABPN1-206ENST00000556809 KIF6Q6ZMV9 814 aa29.17■■■□□ 2.26
PABPN1-206ENST00000556809 NECTIN2Q92692 538 aa29.17■■■□□ 2.26
PABPN1-206ENST00000556809 NIP7Q9Y221 180 aaKnown RBP eCLIP29.17■■■□□ 2.26
PABPN1-206ENST00000556809 DUSP27Q5VZP5 1158 aa29.16■■■□□ 2.26
PABPN1-206ENST00000556809 BRIP1Q9BX63 1249 aa29.16■■■□□ 2.26
PABPN1-206ENST00000556809 ATP10DQ9P241 1426 aa29.15■■■□□ 2.26
PABPN1-206ENST00000556809 CCDC24Q8N4L8 307 aa29.15■■■□□ 2.26
PABPN1-206ENST00000556809 CNBD1Q8NA66 436 aa29.15■■■□□ 2.26
PABPN1-206ENST00000556809 DDX21Q9NR30 783 aaKnown RBP eCLIP29.15■■■□□ 2.26
PABPN1-206ENST00000556809 ZNF521Q96K83 1311 aa29.15■■■□□ 2.26
PABPN1-206ENST00000556809 HDGFL1Q5TGJ6 251 aa29.14■■■□□ 2.26
PABPN1-206ENST00000556809 ZBTB3Q9H5J0 574 aa29.14■■■□□ 2.26
PABPN1-206ENST00000556809 COL11A2P13942 1736 aaPredicted RBP29.13■■■□□ 2.25
PABPN1-206ENST00000556809 DALRD3Q5D0E6 543 aaKnown RBP29.12■■■□□ 2.25
PABPN1-206ENST00000556809 GIGYF2Q6Y7W6 1299 aaKnown RBP29.12■■■□□ 2.25
PABPN1-206ENST00000556809 NBPF5PQ86XG9 351 aaPredicted RBP29.12■■■□□ 2.25
PABPN1-206ENST00000556809 C2CD5Q86YS7 1000 aa29.12■■■□□ 2.25
PABPN1-206ENST00000556809 CHPF2Q9P2E5 772 aa29.12■■■□□ 2.25
PABPN1-206ENST00000556809 PDE6BP35913 854 aa29.11■■■□□ 2.25
PABPN1-206ENST00000556809 COPS6Q7L5N1 327 aa29.11■■■□□ 2.25
PABPN1-206ENST00000556809 C8orf58Q8NAV2 365 aa29.11■■■□□ 2.25
PABPN1-206ENST00000556809 TSR2Q969E8 191 aaKnown RBP29.11■■■□□ 2.25
PABPN1-206ENST00000556809 H0YIN7 160 aa29.1■■■□□ 2.25
PABPN1-206ENST00000556809 ST5P78524 1137 aa29.1■■■□□ 2.25
PABPN1-206ENST00000556809 ZNF34Q8IZ26 560 aa29.1■■■□□ 2.25
PABPN1-206ENST00000556809 PDZRN3Q9UPQ7 1066 aa29.1■■■□□ 2.25
PABPN1-206ENST00000556809 TPTE2Q6XPS3 522 aa29.09■■■□□ 2.25
PABPN1-206ENST00000556809 XAGE3Q8WTP9 111 aa29.09■■■□□ 2.25
PABPN1-206ENST00000556809 DBF4Q9UBU7 674 aaPredicted RBP29.09■■■□□ 2.25
PABPN1-206ENST00000556809 UBN2Q6ZU65 1347 aa29.08■■■□□ 2.25
PABPN1-206ENST00000556809 ELL2O00472 640 aaPredicted RBP29.07■■■□□ 2.24
PABPN1-206ENST00000556809 ANKRD36CQ5JPF3 1778 aa29.07■■■□□ 2.24
PABPN1-206ENST00000556809 FANCIQ9NVI1 1328 aa29.07■■■□□ 2.24
PABPN1-206ENST00000556809 KLRG2A4D1S0 409 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-206ENST00000556809 ZNF784Q8NCA9 323 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-206ENST00000556809 SPINK5Q9NQ38 1064 aaPredicted RBP29.06■■■□□ 2.24
PABPN1-206ENST00000556809 IBTKQ9P2D0 1353 aaPredicted RBP29.05■■■□□ 2.24
PABPN1-206ENST00000556809 NPHP1O15259 732 aa29.05■■■□□ 2.24
PABPN1-206ENST00000556809 GPTP24298 496 aa29.05■■■□□ 2.24
PABPN1-206ENST00000556809 AIMP1Q12904 312 aaKnown RBP29.05■■■□□ 2.24
PABPN1-206ENST00000556809 TSPYL6Q8N831 410 aa29.05■■■□□ 2.24
PABPN1-206ENST00000556809 TTLL6Q8N841 843 aa29.05■■■□□ 2.24
PABPN1-206ENST00000556809 MYH16Q9H6N6 1097 aa29.05■■■□□ 2.24
PABPN1-206ENST00000556809 FAM177BA6PVY3 158 aa29.04■■■□□ 2.24
PABPN1-206ENST00000556809 GOLGA2Q08379 1002 aa29.04■■■□□ 2.24
PABPN1-206ENST00000556809 HYPKQ9NX55 129 aa29.04■■■□□ 2.24
PABPN1-206ENST00000556809 ADCY9O60503 1353 aa29.03■■■□□ 2.24
PABPN1-206ENST00000556809 SRGNP10124 158 aa29.03■■■□□ 2.24
PABPN1-206ENST00000556809 HNRNPUQ00839 825 aaKnown RBP eCLIP29.03■■■□□ 2.24
PABPN1-206ENST00000556809 SUSD4Q5VX71 490 aa29.03■■■□□ 2.24
PABPN1-206ENST00000556809 ARHGAP27Q6ZUM4 889 aa29.03■■■□□ 2.24
PABPN1-206ENST00000556809 NYXQ9GZU5 481 aa29.03■■■□□ 2.24
PABPN1-206ENST00000556809 TNRC6CQ9HCJ0 1690 aaKnown RBP29.02■■■□□ 2.24
PABPN1-206ENST00000556809 ARFGEF2Q9Y6D5 1785 aa29.01■■■□□ 2.23
PABPN1-206ENST00000556809 NTSR2O95665 410 aa29■■■□□ 2.23
PABPN1-206ENST00000556809 PARP10Q53GL7 1025 aa29■■■□□ 2.23
PABPN1-206ENST00000556809 STYK1Q6J9G0 422 aa29■■■□□ 2.23
PABPN1-206ENST00000556809 NUTM1Q86Y26 1132 aa29■■■□□ 2.23
PABPN1-206ENST00000556809 ZNF622Q969S3 477 aaKnown RBP eCLIP29■■■□□ 2.232e-24■■□□□ 11.4
PABPN1-206ENST00000556809 ABCC12Q96J65 1359 aa29■■■□□ 2.23
PABPN1-206ENST00000556809 TCIRG1Q13488 830 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 ERFEQ4G0M1 354 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 HSP90AB3PQ58FF7 597 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 ANKRD13DQ6ZTN6 518 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 PLBD2Q8NHP8 589 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 MASTLQ96GX5 879 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 RIC1Q4ADV7 1423 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 SBF1O95248 1867 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 SLX4Q8IY92 1834 aa28.99■■■□□ 2.23
PABPN1-206ENST00000556809 CACNA1SQ13698 1873 aa28.98■■■□□ 2.23
PABPN1-206ENST00000556809 E9PSI1 815 aa28.98■■■□□ 2.23
PABPN1-206ENST00000556809 GTF2E1P29083 439 aaPredicted RBP28.97■■■□□ 2.23
PABPN1-206ENST00000556809 CCDC30Q5VVM6 783 aa28.97■■■□□ 2.23
PABPN1-206ENST00000556809 CHMP4AQ9BY43 222 aa28.97■■■□□ 2.23
PABPN1-206ENST00000556809 EXOSC9Q06265 439 aaKnown RBP28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms