RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 COL24A1Q17RW2 1714 aa30.87■■■□□ 2.53
RCCD1-206ENST00000556618 NUP98P52948 1817 aa30.87■■■□□ 2.53
RCCD1-206ENST00000556618 MSL1Q68DK7 614 aa30.87■■■□□ 2.53
RCCD1-206ENST00000556618 ATF5Q9Y2D1 282 aaPredicted RBP30.87■■■□□ 2.53
RCCD1-206ENST00000556618 MAP3K15Q6ZN16 1313 aa30.86■■■□□ 2.53
RCCD1-206ENST00000556618 FKBP8Q14318 412 aa30.86■■■□□ 2.53
RCCD1-206ENST00000556618 NLGN1Q8N2Q7 840 aa30.86■■■□□ 2.53
RCCD1-206ENST00000556618 ERVV-1B6SEH8 477 aa30.84■■■□□ 2.53
RCCD1-206ENST00000556618 G2E3Q7L622 706 aa30.84■■■□□ 2.53
RCCD1-206ENST00000556618 SSH1Q8WYL5 1049 aa30.84■■■□□ 2.53
RCCD1-206ENST00000556618 SRCAPQ6ZRS2 3230 aa30.84■■■□□ 2.53
RCCD1-206ENST00000556618 ALDH1L2Q3SY69 923 aa30.83■■■□□ 2.53
RCCD1-206ENST00000556618 ZBTB3Q9H5J0 574 aa30.83■■■□□ 2.53
RCCD1-206ENST00000556618 RGL2O15211 777 aa30.83■■■□□ 2.53
RCCD1-206ENST00000556618 HLFQ16534 295 aa30.83■■■□□ 2.53
RCCD1-206ENST00000556618 CLEC4GQ6UXB4 293 aa30.83■■■□□ 2.53
RCCD1-206ENST00000556618 ANKRD13DQ6ZTN6 518 aa30.82■■■□□ 2.52
RCCD1-206ENST00000556618 SPON1Q9HCB6 807 aa30.82■■■□□ 2.52
RCCD1-206ENST00000556618 MRPL50Q8N5N7 158 aaKnown RBP30.81■■■□□ 2.52
RCCD1-206ENST00000556618 RARSP54136 660 aaKnown RBP30.8■■■□□ 2.52
RCCD1-206ENST00000556618 PLBD2Q8NHP8 589 aa30.8■■■□□ 2.52
RCCD1-206ENST00000556618 ZNF652Q9Y2D9 606 aa30.8■■■□□ 2.52
RCCD1-206ENST00000556618 FLIIQ13045 1269 aa30.79■■■□□ 2.52
RCCD1-206ENST00000556618 TM4SF1P30408 202 aa30.79■■■□□ 2.52
RCCD1-206ENST00000556618 GIGYF2Q6Y7W6 1299 aaKnown RBP30.79■■■□□ 2.52
RCCD1-206ENST00000556618 SGIP1Q9BQI5 828 aa30.79■■■□□ 2.52
RCCD1-206ENST00000556618 BCL2L13Q9BXK5 485 aa30.79■■■□□ 2.52
RCCD1-206ENST00000556618 TBC1D9BQ66K14 1250 aa30.78■■■□□ 2.52
RCCD1-206ENST00000556618 SMC4Q9NTJ3 1288 aa30.78■■■□□ 2.52
RCCD1-206ENST00000556618 ARFGEF2Q9Y6D5 1785 aa30.77■■■□□ 2.52
RCCD1-206ENST00000556618 DDX58O95786 925 aaKnown RBP30.77■■■□□ 2.52
RCCD1-206ENST00000556618 PTGER2P43116 358 aa30.77■■■□□ 2.52
RCCD1-206ENST00000556618 MMP10P09238 476 aa30.76■■■□□ 2.52
RCCD1-206ENST00000556618 NFIXQ14938 502 aa30.76■■■□□ 2.52
RCCD1-206ENST00000556618 POLD1P28340 1107 aa30.75■■■□□ 2.51
RCCD1-206ENST00000556618 RIC3Q7Z5B4 369 aa30.75■■■□□ 2.51
RCCD1-206ENST00000556618 FKBP5Q13451 457 aaPredicted RBP30.75■■■□□ 2.51
RCCD1-206ENST00000556618 BICDL1Q6ZP65 573 aa30.75■■■□□ 2.51
RCCD1-206ENST00000556618 BRPF1P55201 1214 aaPredicted RBP30.74■■■□□ 2.51
RCCD1-206ENST00000556618 KSR2Q6VAB6 950 aa30.74■■■□□ 2.51
RCCD1-206ENST00000556618 ANKRD36CQ5JPF3 1778 aa30.74■■■□□ 2.51
RCCD1-206ENST00000556618 PI4KAP2A4QPH2 592 aa30.73■■■□□ 2.51
RCCD1-206ENST00000556618 PI4KAP1Q8N8J0 262 aa30.73■■■□□ 2.51
RCCD1-206ENST00000556618 ATP10DQ9P241 1426 aa30.73■■■□□ 2.51
RCCD1-206ENST00000556618 ADCY9O60503 1353 aa30.72■■■□□ 2.51
RCCD1-206ENST00000556618 DDR1Q08345 913 aa30.72■■■□□ 2.51
RCCD1-206ENST00000556618 SETDB2Q96T68 719 aa30.72■■■□□ 2.51
RCCD1-206ENST00000556618 NIP7Q9Y221 180 aaKnown RBP eCLIP30.72■■■□□ 2.51
RCCD1-206ENST00000556618 TCIRG1Q13488 830 aa30.71■■■□□ 2.51
RCCD1-206ENST00000556618 HSP90AB3PQ58FF7 597 aa30.71■■■□□ 2.51
RCCD1-206ENST00000556618 MAP3K2Q9Y2U5 619 aa30.71■■■□□ 2.51
RCCD1-206ENST00000556618 POLRMTO00411 1230 aaKnown RBP30.71■■■□□ 2.51
RCCD1-206ENST00000556618 ZNF34Q8IZ26 560 aa30.71■■■□□ 2.51
RCCD1-206ENST00000556618 PARP3Q9Y6F1 533 aa30.71■■■□□ 2.51
RCCD1-206ENST00000556618 AFDNP55196 1824 aaKnown RBP30.7■■■□□ 2.51
RCCD1-206ENST00000556618 BCAR3O75815 825 aa30.7■■■□□ 2.5
RCCD1-206ENST00000556618 GPTP24298 496 aa30.68■■■□□ 2.5
RCCD1-206ENST00000556618 METTL22Q9BUU2 404 aaPredicted RBP30.68■■■□□ 2.5
RCCD1-206ENST00000556618 LRP5O75197 1615 aa30.68■■■□□ 2.5
RCCD1-206ENST00000556618 PTPRCP08575 1304 aa30.68■■■□□ 2.5
RCCD1-206ENST00000556618 CARMIL3Q8ND23 1372 aa30.67■■■□□ 2.5
RCCD1-206ENST00000556618 SERPINB2P05120 415 aa30.66■■■□□ 2.5
RCCD1-206ENST00000556618 NOB1Q9ULX3 412 aaKnown RBP30.66■■■□□ 2.5
RCCD1-206ENST00000556618 UBN2Q6ZU65 1347 aa30.66■■■□□ 2.5
RCCD1-206ENST00000556618 DNAAF4Q8WXU2 420 aa30.66■■■□□ 2.5
RCCD1-206ENST00000556618 ISCA1Q9BUE6 129 aa30.66■■■□□ 2.5
RCCD1-206ENST00000556618 NRXN2Q9P2S2 1712 aa30.65■■■□□ 2.5
RCCD1-206ENST00000556618 F6X3S4 739 aa30.65■■■□□ 2.5
RCCD1-206ENST00000556618 MYD88Q99836 296 aa30.65■■■□□ 2.5
RCCD1-206ENST00000556618 ATP5J2-PTCD1G3V325 749 aa30.64■■■□□ 2.5
RCCD1-206ENST00000556618 PARP10Q53GL7 1025 aa30.63■■■□□ 2.49
RCCD1-206ENST00000556618 RCAN3Q9UKA8 241 aa30.63■■■□□ 2.49
RCCD1-206ENST00000556618 KIF16BQ96L93 1317 aa30.63■■■□□ 2.49
RCCD1-206ENST00000556618 TRIM28Q13263 835 aaKnown RBP30.62■■■□□ 2.49
RCCD1-206ENST00000556618 NLRP10Q86W26 655 aa30.62■■■□□ 2.49
RCCD1-206ENST00000556618 NEXNQ0ZGT2 675 aa30.62■■■□□ 2.49
RCCD1-206ENST00000556618 SUSD4Q5VX71 490 aa30.62■■■□□ 2.49
RCCD1-206ENST00000556618 NBPF5PQ86XG9 351 aaPredicted RBP30.62■■■□□ 2.49
RCCD1-206ENST00000556618 FAM177BA6PVY3 158 aa30.61■■■□□ 2.49
RCCD1-206ENST00000556618 PPP1R1BQ9UD71 204 aaPredicted RBP30.61■■■□□ 2.49
RCCD1-206ENST00000556618 IGKV5-2P06315 115 aa30.6■■■□□ 2.49
RCCD1-206ENST00000556618 ARHGAP45Q92619 1136 aa30.6■■■□□ 2.49
RCCD1-206ENST00000556618 TPTE2Q6XPS3 522 aa30.59■■■□□ 2.49
RCCD1-206ENST00000556618 PPP1R42Q7Z4L9 355 aa30.59■■■□□ 2.49
RCCD1-206ENST00000556618 IPO8O15397 1037 aaKnown RBP30.58■■■□□ 2.49
RCCD1-206ENST00000556618 PRR5LQ6MZQ0 368 aa30.58■■■□□ 2.49
RCCD1-206ENST00000556618 FRAT1Q92837 279 aaPredicted RBP30.58■■■□□ 2.49
RCCD1-206ENST00000556618 CNBD1Q8NA66 436 aa30.58■■■□□ 2.49
RCCD1-206ENST00000556618 CCDC191Q8NCU4 936 aa30.58■■■□□ 2.49
RCCD1-206ENST00000556618 API5Q9BZZ5 524 aaKnown RBP30.58■■■□□ 2.49
RCCD1-206ENST00000556618 NYXQ9GZU5 481 aa30.58■■■□□ 2.49
RCCD1-206ENST00000556618 IBTKQ9P2D0 1353 aaPredicted RBP30.57■■■□□ 2.48
RCCD1-206ENST00000556618 KIF13BQ9NQT8 1826 aa30.57■■■□□ 2.48
RCCD1-206ENST00000556618 NTSR2O95665 410 aa30.57■■■□□ 2.48
RCCD1-206ENST00000556618 SLC4A10Q6U841 1118 aa30.57■■■□□ 2.48
RCCD1-206ENST00000556618 LINS1Q8NG48 757 aa30.57■■■□□ 2.48
RCCD1-206ENST00000556618 UTP14AQ9BVJ6 771 aaKnown RBP30.57■■■□□ 2.48
RCCD1-206ENST00000556618 CWF19L2Q2TBE0 894 aaKnown RBP30.56■■■□□ 2.48
RCCD1-206ENST00000556618 BEND3Q5T5X7 828 aa30.56■■■□□ 2.48
RCCD1-206ENST00000556618 NEURL1BA8MQ27 555 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms