RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 KIF6Q6ZMV9 814 aa23.33■■□□□ 1.33
EFCAB11-211ENST00000556609 RNF181Q9P0P0 153 aa23.33■■□□□ 1.33
EFCAB11-211ENST00000556609 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.32
EFCAB11-211ENST00000556609 ARFGEF1Q9Y6D6 1849 aa23.32■■□□□ 1.32
EFCAB11-211ENST00000556609 RRP7AQ9Y3A4 280 aaKnown RBP23.32■■□□□ 1.32
EFCAB11-211ENST00000556609 AFDNP55196 1824 aaKnown RBP23.31■■□□□ 1.32
EFCAB11-211ENST00000556609 LMNB1P20700 586 aa23.31■■□□□ 1.32
EFCAB11-211ENST00000556609 SOGA3Q5TF21 947 aa23.31■■□□□ 1.32
EFCAB11-211ENST00000556609 MASTLQ96GX5 879 aa23.31■■□□□ 1.32
EFCAB11-211ENST00000556609 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
EFCAB11-211ENST00000556609 SRGNP10124 158 aa23.3■■□□□ 1.32
EFCAB11-211ENST00000556609 NYXQ9GZU5 481 aa23.3■■□□□ 1.32
EFCAB11-211ENST00000556609 ADAMTS8Q9UP79 889 aa23.3■■□□□ 1.32
EFCAB11-211ENST00000556609 KIF3CO14782 793 aa23.29■■□□□ 1.32
EFCAB11-211ENST00000556609 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
EFCAB11-211ENST00000556609 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
EFCAB11-211ENST00000556609 NGEFQ8N5V2 710 aa23.29■■□□□ 1.32
EFCAB11-211ENST00000556609 MAP3K15Q6ZN16 1313 aa23.29■■□□□ 1.32
EFCAB11-211ENST00000556609 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
EFCAB11-211ENST00000556609 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
EFCAB11-211ENST00000556609 KLRG2A4D1S0 409 aaPredicted RBP23.27■■□□□ 1.32
EFCAB11-211ENST00000556609 MYL6BP14649 208 aa23.27■■□□□ 1.32
EFCAB11-211ENST00000556609 HLFQ16534 295 aa23.27■■□□□ 1.32
EFCAB11-211ENST00000556609 DLG5Q8TDM6 1919 aa23.27■■□□□ 1.32
EFCAB11-211ENST00000556609 CHL1O00533 1208 aa23.26■■□□□ 1.31
EFCAB11-211ENST00000556609 TOMM70O94826 608 aa23.26■■□□□ 1.31
EFCAB11-211ENST00000556609 NPR1P16066 1061 aa23.26■■□□□ 1.31
EFCAB11-211ENST00000556609 KDM3BQ7LBC6 1761 aa23.26■■□□□ 1.31
EFCAB11-211ENST00000556609 C21orf2O43822 256 aa23.25■■□□□ 1.31
EFCAB11-211ENST00000556609 EIF2S2P20042 333 aaKnown RBP23.24■■□□□ 1.31
EFCAB11-211ENST00000556609 RASSF7Q02833 373 aa23.24■■□□□ 1.31
EFCAB11-211ENST00000556609 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
EFCAB11-211ENST00000556609 TRIM35Q9UPQ4 493 aa23.24■■□□□ 1.31
EFCAB11-211ENST00000556609 BCORQ6W2J9 1755 aa23.24■■□□□ 1.31
EFCAB11-211ENST00000556609 CALD1Q05682 793 aaKnown RBP23.23■■□□□ 1.31
EFCAB11-211ENST00000556609 PRPF40BQ6NWY9 871 aaKnown RBP23.23■■□□□ 1.31
EFCAB11-211ENST00000556609 TTLL7Q6ZT98 887 aa23.23■■□□□ 1.31
EFCAB11-211ENST00000556609 NFKBIEO00221 500 aa23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 HSPA6P17066 643 aa23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 ALDH1B1P30837 517 aa23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 GIGYF2Q6Y7W6 1299 aaKnown RBP23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 LTBP3Q9NS15 1303 aa23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 LAMB4A4D0S4 1761 aa23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 DLEC1Q9Y238 1755 aa23.22■■□□□ 1.31
EFCAB11-211ENST00000556609 FAM177BA6PVY3 158 aa23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 HOXB7P09629 217 aa23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 PARP10Q53GL7 1025 aa23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 TAOK3Q9H2K8 898 aa23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 ZBTB3Q9H5J0 574 aa23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 NMRK2Q9NPI5 230 aa23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 LAS1LQ9Y4W2 734 aaKnown RBP23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
EFCAB11-211ENST00000556609 PDIA6Q15084 440 aa23.2■■□□□ 1.3
EFCAB11-211ENST00000556609 DPY19L2Q6NUT2 758 aa23.2■■□□□ 1.3
EFCAB11-211ENST00000556609 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
EFCAB11-211ENST00000556609 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
EFCAB11-211ENST00000556609 ZNF219Q9P2Y4 722 aaPredicted RBP23.2■■□□□ 1.3
EFCAB11-211ENST00000556609 GLTPD2A6NH11 291 aa23.19■■□□□ 1.3
EFCAB11-211ENST00000556609 HSP90AB3PQ58FF7 597 aa23.19■■□□□ 1.3
EFCAB11-211ENST00000556609 ZNF34Q8IZ26 560 aa23.19■■□□□ 1.3
EFCAB11-211ENST00000556609 RBM46Q8TBY0 533 aaKnown RBP23.19■■□□□ 1.3
EFCAB11-211ENST00000556609 CCDC93Q567U6 631 aa23.18■■□□□ 1.3
EFCAB11-211ENST00000556609 LRP10Q7Z4F1 713 aa23.18■■□□□ 1.3
EFCAB11-211ENST00000556609 DDX21Q9NR30 783 aaKnown RBP eCLIP23.18■■□□□ 1.3
EFCAB11-211ENST00000556609 ERFEQ4G0M1 354 aa23.17■■□□□ 1.3
EFCAB11-211ENST00000556609 RTKN2Q8IZC4 609 aa23.17■■□□□ 1.3
EFCAB11-211ENST00000556609 C7orf43Q8WVR3 580 aa23.17■■□□□ 1.3
EFCAB11-211ENST00000556609 RRAGCQ9HB90 399 aa23.17■■□□□ 1.3
EFCAB11-211ENST00000556609 ANKRD31Q8N7Z5 1873 aa23.17■■□□□ 1.3
EFCAB11-211ENST00000556609 GPTP24298 496 aa23.16■■□□□ 1.3
EFCAB11-211ENST00000556609 CRY2Q49AN0 593 aa23.16■■□□□ 1.3
EFCAB11-211ENST00000556609 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
EFCAB11-211ENST00000556609 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 APAF1O14727 1248 aa23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 VEGFAP15692 232 aaPredicted RBP23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 PRELPP51888 382 aa23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 FSTL1Q12841 308 aa23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 GRIPAP1Q4V328 841 aa23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 SUSD4Q5VX71 490 aa23.15■■□□□ 1.3
EFCAB11-211ENST00000556609 GNAI1P63096 354 aa23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 CC2D2BQ6DHV5 1058 aa23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 COPS6Q7L5N1 327 aa23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 NUTM1Q86Y26 1132 aa23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 RPGRQ92834 1020 aaKnown RBP23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 UTP14AQ9BVJ6 771 aaKnown RBP23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 IFT57Q9NWB7 429 aa23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 RIC1Q4ADV7 1423 aa23.14■■□□□ 1.29
EFCAB11-211ENST00000556609 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 HOXA10P31260 410 aaPredicted RBP23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 APLP1P51693 650 aa23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 PROSER3Q2NL68 480 aa23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 HDGFL1Q5TGJ6 251 aa23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 XAGE3Q8WTP9 111 aa23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 DBF4Q9UBU7 674 aaPredicted RBP23.13■■□□□ 1.29
EFCAB11-211ENST00000556609 ZNF316A6NFI3 1004 aaPredicted RBP23.12■■□□□ 1.29
EFCAB11-211ENST00000556609 NECTIN2Q92692 538 aa23.12■■□□□ 1.29
EFCAB11-211ENST00000556609 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
EFCAB11-211ENST00000556609 NLRP3Q96P20 1036 aa23.12■■□□□ 1.29
EFCAB11-211ENST00000556609 NTSR2O95665 410 aa23.11■■□□□ 1.29
EFCAB11-211ENST00000556609 ZNF853P0CG23 659 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms