RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 MYBBP1AQ9BQG0 1328 aaKnown RBP13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 MYL6BP14649 208 aa13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 CLEC4GQ6UXB4 293 aa13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPTLC2-205ENST00000556607 KDM2BQ8NHM5 1336 aa13.91□□□□□ -0.18
SPTLC2-205ENST00000556607 COL11A2P13942 1736 aaPredicted RBP13.91□□□□□ -0.18
SPTLC2-205ENST00000556607 C21orf2O43822 256 aa13.91□□□□□ -0.18
SPTLC2-205ENST00000556607 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
SPTLC2-205ENST00000556607 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
SPTLC2-205ENST00000556607 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
SPTLC2-205ENST00000556607 TOMM70O94826 608 aa13.9□□□□□ -0.18
SPTLC2-205ENST00000556607 HSPA6P17066 643 aa13.9□□□□□ -0.18
SPTLC2-205ENST00000556607 LMNB1P20700 586 aa13.9□□□□□ -0.18
SPTLC2-205ENST00000556607 TPTE2Q6XPS3 522 aa13.9□□□□□ -0.18
SPTLC2-205ENST00000556607 RRAGCQ9HB90 399 aa13.9□□□□□ -0.18
SPTLC2-205ENST00000556607 NUP98P52948 1817 aa13.9□□□□□ -0.18
SPTLC2-205ENST00000556607 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 HLFQ16534 295 aa13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 KIF6Q6ZMV9 814 aa13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 MASTLQ96GX5 879 aa13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 LAS1LQ9Y4W2 734 aaKnown RBP13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 TIAM2Q8IVF5 1701 aa13.89□□□□□ -0.19
SPTLC2-205ENST00000556607 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
SPTLC2-205ENST00000556607 EIF2S2P20042 333 aaKnown RBP13.88□□□□□ -0.19
SPTLC2-205ENST00000556607 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
SPTLC2-205ENST00000556607 SLX4Q8IY92 1834 aa13.87□□□□□ -0.19
SPTLC2-205ENST00000556607 SRGNP10124 158 aa13.87□□□□□ -0.19
SPTLC2-205ENST00000556607 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
SPTLC2-205ENST00000556607 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
SPTLC2-205ENST00000556607 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
SPTLC2-205ENST00000556607 PRPF40BQ6NWY9 871 aaKnown RBP13.86□□□□□ -0.19
SPTLC2-205ENST00000556607 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
SPTLC2-205ENST00000556607 FER1L6Q2WGJ9 1857 aa13.86□□□□□ -0.19
SPTLC2-205ENST00000556607 MAP3K15Q6ZN16 1313 aa13.86□□□□□ -0.19
SPTLC2-205ENST00000556607 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
SPTLC2-205ENST00000556607 NFKBIEO00221 500 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 GPTP24298 496 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 ERFEQ4G0M1 354 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 TTLL7Q6ZT98 887 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 NYXQ9GZU5 481 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 TAOK3Q9H2K8 898 aa13.85□□□□□ -0.19
SPTLC2-205ENST00000556607 GLTPD2A6NH11 291 aa13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 ERVV-1B6SEH8 477 aa13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 NPR1P16066 1061 aa13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 PRELPP51888 382 aa13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 SOGA3Q5TF21 947 aa13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 ZC3H4Q9UPT8 1303 aaKnown RBP13.84□□□□□ -0.19
SPTLC2-205ENST00000556607 RGL2O15211 777 aa13.83□□□□□ -0.2
SPTLC2-205ENST00000556607 APLP1P51693 650 aa13.83□□□□□ -0.2
SPTLC2-205ENST00000556607 RBM46Q8TBY0 533 aaKnown RBP13.83□□□□□ -0.2
SPTLC2-205ENST00000556607 ADAMTS8Q9UP79 889 aa13.83□□□□□ -0.2
SPTLC2-205ENST00000556607 ANXA1P04083 346 aa13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 VEGFAP15692 232 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 ALDH1B1P30837 517 aa13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 AIMP1Q12904 312 aaKnown RBP13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 CCDC93Q567U6 631 aa13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
SPTLC2-205ENST00000556607 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
SPTLC2-205ENST00000556607 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
SPTLC2-205ENST00000556607 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
SPTLC2-205ENST00000556607 FSTL1Q12841 308 aa13.8□□□□□ -0.2
SPTLC2-205ENST00000556607 SUSD4Q5VX71 490 aa13.8□□□□□ -0.2
SPTLC2-205ENST00000556607 WDR90Q96KV7 1748 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 SMC1BQ8NDV3 1235 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 UBN2Q6ZU65 1347 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 LTBP3Q9NS15 1303 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
SPTLC2-205ENST00000556607 KLRG2A4D1S0 409 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 TCERG1O14776 1098 aaKnown RBP13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 PDIA6Q15084 440 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 OLFM4Q6UX06 510 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 COPS6Q7L5N1 327 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 ZNF34Q8IZ26 560 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
SPTLC2-205ENST00000556607 CHL1O00533 1208 aa13.77□□□□□ -0.21
SPTLC2-205ENST00000556607 PARP10Q53GL7 1025 aa13.77□□□□□ -0.21
SPTLC2-205ENST00000556607 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.21
SPTLC2-205ENST00000556607 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-205ENST00000556607 NLRP3Q96P20 1036 aa13.77□□□□□ -0.21
SPTLC2-205ENST00000556607 UTP14AQ9BVJ6 771 aaKnown RBP13.77□□□□□ -0.21
SPTLC2-205ENST00000556607 NTSR2O95665 410 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms