RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 CACNA1SQ13698 1873 aa25■■□□□ 1.59
CDKN3-209ENST00000556102 ZNF652Q9Y2D9 606 aa25■■□□□ 1.59
CDKN3-209ENST00000556102 DICER1Q9UPY3 1922 aaKnown RBP25■■□□□ 1.59
CDKN3-209ENST00000556102 GLTPD2A6NH11 291 aa24.99■■□□□ 1.59
CDKN3-209ENST00000556102 ARFGEF2Q9Y6D5 1785 aa24.99■■□□□ 1.59
CDKN3-209ENST00000556102 KDM3BQ7LBC6 1761 aa24.98■■□□□ 1.59
CDKN3-209ENST00000556102 NBPF26B4DH59 902 aa24.98■■□□□ 1.59
CDKN3-209ENST00000556102 C21orf2O43822 256 aa24.98■■□□□ 1.59
CDKN3-209ENST00000556102 NBPF10Q6P3W6 841 aaKnown RBP24.98■■□□□ 1.59
CDKN3-209ENST00000556102 NBPF15Q8N660 670 aa24.98■■□□□ 1.59
CDKN3-209ENST00000556102 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
CDKN3-209ENST00000556102 RGL2O15211 777 aa24.97■■□□□ 1.59
CDKN3-209ENST00000556102 STYK1Q6J9G0 422 aa24.97■■□□□ 1.59
CDKN3-209ENST00000556102 CNKSR1Q969H4 720 aa24.97■■□□□ 1.59
CDKN3-209ENST00000556102 ZNF219Q9P2Y4 722 aaPredicted RBP24.97■■□□□ 1.59
CDKN3-209ENST00000556102 SRGNP10124 158 aa24.96■■□□□ 1.59
CDKN3-209ENST00000556102 NBPF5PQ86XG9 351 aaPredicted RBP24.96■■□□□ 1.59
CDKN3-209ENST00000556102 DNAJC5GQ8N7S2 189 aa24.96■■□□□ 1.59
CDKN3-209ENST00000556102 PNISRQ8TF01 805 aaKnown RBP24.95■■□□□ 1.58
CDKN3-209ENST00000556102 MASTLQ96GX5 879 aa24.95■■□□□ 1.58
CDKN3-209ENST00000556102 PLEKHF1Q96S99 279 aa24.95■■□□□ 1.58
CDKN3-209ENST00000556102 MIS18AQ9NYP9 233 aa24.95■■□□□ 1.58
CDKN3-209ENST00000556102 LTBP3Q9NS15 1303 aa24.94■■□□□ 1.58
CDKN3-209ENST00000556102 VEGFAP15692 232 aaPredicted RBP24.94■■□□□ 1.58
CDKN3-209ENST00000556102 NFE2L2Q16236 605 aa24.93■■□□□ 1.58
CDKN3-209ENST00000556102 PRPF40BQ6NWY9 871 aaKnown RBP24.93■■□□□ 1.58
CDKN3-209ENST00000556102 SMC1BQ8NDV3 1235 aa24.93■■□□□ 1.58
CDKN3-209ENST00000556102 NIP7Q9Y221 180 aaKnown RBP eCLIP24.93■■□□□ 1.58
CDKN3-209ENST00000556102 SOGA3Q5TF21 947 aa24.92■■□□□ 1.58
CDKN3-209ENST00000556102 TAOK3Q9H2K8 898 aa24.92■■□□□ 1.58
CDKN3-209ENST00000556102 ERFEQ4G0M1 354 aa24.91■■□□□ 1.58
CDKN3-209ENST00000556102 PNNQ9H307 717 aaKnown RBP24.91■■□□□ 1.58
CDKN3-209ENST00000556102 IFFO2Q5TF58 517 aa24.9■■□□□ 1.58
CDKN3-209ENST00000556102 DPY19L2Q6NUT2 758 aa24.9■■□□□ 1.58
CDKN3-209ENST00000556102 TPTE2Q6XPS3 522 aa24.9■■□□□ 1.58
CDKN3-209ENST00000556102 MAPK8IP3Q9UPT6 1336 aa24.89■■□□□ 1.58
CDKN3-209ENST00000556102 KLRG2A4D1S0 409 aaPredicted RBP24.88■■□□□ 1.57
CDKN3-209ENST00000556102 NPR1P16066 1061 aa24.88■■□□□ 1.57
CDKN3-209ENST00000556102 EIF4A1P60842 406 aaKnown RBP24.88■■□□□ 1.57
CDKN3-209ENST00000556102 HLFQ16534 295 aa24.88■■□□□ 1.57
CDKN3-209ENST00000556102 NUP98P52948 1817 aa24.88■■□□□ 1.57
CDKN3-209ENST00000556102 HTRA3P83110 453 aa24.87■■□□□ 1.57
CDKN3-209ENST00000556102 THUMPD2Q9BTF0 503 aaKnown RBP24.87■■□□□ 1.57
CDKN3-209ENST00000556102 POTECB2RU33 542 aa24.86■■□□□ 1.57
CDKN3-209ENST00000556102 C7orf43Q8WVR3 580 aa24.86■■□□□ 1.57
CDKN3-209ENST00000556102 KLRG1Q96E93 195 aa24.86■■□□□ 1.57
CDKN3-209ENST00000556102 FAM177BA6PVY3 158 aa24.85■■□□□ 1.57
CDKN3-209ENST00000556102 CCDC93Q567U6 631 aa24.85■■□□□ 1.57
CDKN3-209ENST00000556102 ERVV-1B6SEH8 477 aa24.84■■□□□ 1.57
CDKN3-209ENST00000556102 NGEFQ8N5V2 710 aa24.84■■□□□ 1.57
CDKN3-209ENST00000556102 RALBP1Q15311 655 aa24.83■■□□□ 1.57
CDKN3-209ENST00000556102 RRP7AQ9Y3A4 280 aaKnown RBP24.83■■□□□ 1.57
CDKN3-209ENST00000556102 MAP3K15Q6ZN16 1313 aa24.83■■□□□ 1.56
CDKN3-209ENST00000556102 GTF2E1P29083 439 aaPredicted RBP24.82■■□□□ 1.56
CDKN3-209ENST00000556102 KIF6Q6ZMV9 814 aa24.82■■□□□ 1.56
CDKN3-209ENST00000556102 NYXQ9GZU5 481 aa24.82■■□□□ 1.56
CDKN3-209ENST00000556102 TTLL7Q6ZT98 887 aa24.81■■□□□ 1.56
CDKN3-209ENST00000556102 MYL6BP14649 208 aa24.8■■□□□ 1.56
CDKN3-209ENST00000556102 JMYQ8N9B5 988 aa24.8■■□□□ 1.56
CDKN3-209ENST00000556102 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
CDKN3-209ENST00000556102 ALDH1B1P30837 517 aa24.79■■□□□ 1.56
CDKN3-209ENST00000556102 FKBP4Q02790 459 aaKnown RBP eCLIP24.79■■□□□ 1.56
CDKN3-209ENST00000556102 TSPYL4Q9UJ04 414 aa24.79■■□□□ 1.56
CDKN3-209ENST00000556102 ABCC12Q96J65 1359 aa24.79■■□□□ 1.56
CDKN3-209ENST00000556102 DDNO94850 711 aaPredicted RBP24.78■■□□□ 1.56
CDKN3-209ENST00000556102 IBTKQ9P2D0 1353 aaPredicted RBP24.78■■□□□ 1.56
CDKN3-209ENST00000556102 RIPK4P57078 832 aa24.77■■□□□ 1.56
CDKN3-209ENST00000556102 CRY2Q49AN0 593 aa24.77■■□□□ 1.56
CDKN3-209ENST00000556102 NUTM1Q86Y26 1132 aa24.77■■□□□ 1.56
CDKN3-209ENST00000556102 RTKN2Q8IZC4 609 aa24.77■■□□□ 1.56
CDKN3-209ENST00000556102 ZBTB3Q9H5J0 574 aa24.77■■□□□ 1.56
CDKN3-209ENST00000556102 RIC1Q4ADV7 1423 aa24.77■■□□□ 1.56
CDKN3-209ENST00000556102 OLFM4Q6UX06 510 aa24.76■■□□□ 1.55
CDKN3-209ENST00000556102 SCN4AP35499 1836 aa24.76■■□□□ 1.55
CDKN3-209ENST00000556102 UBN2Q6ZU65 1347 aa24.76■■□□□ 1.55
CDKN3-209ENST00000556102 GPTP24298 496 aa24.75■■□□□ 1.55
CDKN3-209ENST00000556102 ZNF277Q9NRM2 450 aaPredicted RBP24.75■■□□□ 1.55
CDKN3-209ENST00000556102 BABAM1Q9NWV8 329 aa24.75■■□□□ 1.55
CDKN3-209ENST00000556102 TMPOP42166 694 aaKnown RBP24.74■■□□□ 1.55
CDKN3-209ENST00000556102 LMOD3Q0VAK6 560 aa24.74■■□□□ 1.55
CDKN3-209ENST00000556102 GIGYF2Q6Y7W6 1299 aaKnown RBP24.74■■□□□ 1.55
CDKN3-209ENST00000556102 IQCA1LA6NCM1 817 aa24.73■■□□□ 1.55
CDKN3-209ENST00000556102 ZNF34Q8IZ26 560 aa24.73■■□□□ 1.55
CDKN3-209ENST00000556102 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
CDKN3-209ENST00000556102 SNED1Q8TER0 1413 aa24.72■■□□□ 1.55
CDKN3-209ENST00000556102 MYBBP1AQ9BQG0 1328 aaKnown RBP24.72■■□□□ 1.55
CDKN3-209ENST00000556102 SUSD4Q5VX71 490 aa24.72■■□□□ 1.55
CDKN3-209ENST00000556102 CHADLQ6NUI6 762 aa24.72■■□□□ 1.55
CDKN3-209ENST00000556102 NTSR2O95665 410 aa24.71■■□□□ 1.55
CDKN3-209ENST00000556102 EIF2S2P20042 333 aaKnown RBP24.71■■□□□ 1.55
CDKN3-209ENST00000556102 HOXA10P31260 410 aaPredicted RBP24.71■■□□□ 1.55
CDKN3-209ENST00000556102 PDIA6Q15084 440 aa24.71■■□□□ 1.55
CDKN3-209ENST00000556102 LRP10Q7Z4F1 713 aa24.71■■□□□ 1.55
CDKN3-209ENST00000556102 RPGRQ92834 1020 aaKnown RBP24.71■■□□□ 1.55
CDKN3-209ENST00000556102 ZNF541Q9H0D2 1346 aa24.7■■□□□ 1.54
CDKN3-209ENST00000556102 POTEIP0CG38 1075 aa24.7■■□□□ 1.54
CDKN3-209ENST00000556102 POTEJP0CG39 1038 aa24.7■■□□□ 1.54
CDKN3-209ENST00000556102 IARSP41252 1262 aaKnown RBP24.7■■□□□ 1.54
CDKN3-209ENST00000556102 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
CDKN3-209ENST00000556102 PARP10Q53GL7 1025 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms