RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ST5P78524 1137 aa18.16■□□□□ 0.5
PCNX4-209ENST00000555569 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
PCNX4-209ENST00000555569 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
PCNX4-209ENST00000555569 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
PCNX4-209ENST00000555569 ZNF622Q969S3 477 aaKnown RBP eCLIP18.14■□□□□ 0.49
PCNX4-209ENST00000555569 RUNDC1Q96C34 613 aa18.14■□□□□ 0.49
PCNX4-209ENST00000555569 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.49
PCNX4-209ENST00000555569 RNF181Q9P0P0 153 aa18.14■□□□□ 0.49
PCNX4-209ENST00000555569 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
PCNX4-209ENST00000555569 NUP98P52948 1817 aa18.14■□□□□ 0.49
PCNX4-209ENST00000555569 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
PCNX4-209ENST00000555569 ZEB1P37275 1124 aaPredicted RBP18.13■□□□□ 0.49
PCNX4-209ENST00000555569 NEUROD2Q15784 382 aa18.13■□□□□ 0.49
PCNX4-209ENST00000555569 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
PCNX4-209ENST00000555569 NIP7Q9Y221 180 aaKnown RBP eCLIP18.13■□□□□ 0.49
PCNX4-209ENST00000555569 CACNA1SQ13698 1873 aa18.13■□□□□ 0.49
PCNX4-209ENST00000555569 RASSF7Q02833 373 aa18.12■□□□□ 0.49
PCNX4-209ENST00000555569 HLFQ16534 295 aa18.12■□□□□ 0.49
PCNX4-209ENST00000555569 ADAMTS8Q9UP79 889 aa18.12■□□□□ 0.49
PCNX4-209ENST00000555569 KIF3CO14782 793 aa18.11■□□□□ 0.49
PCNX4-209ENST00000555569 MYL6BP14649 208 aa18.11■□□□□ 0.49
PCNX4-209ENST00000555569 ERBB4Q15303 1308 aa18.11■□□□□ 0.49
PCNX4-209ENST00000555569 ARFGEF2Q9Y6D5 1785 aa18.11■□□□□ 0.49
PCNX4-209ENST00000555569 MAP3K15Q6ZN16 1313 aa18.1■□□□□ 0.49
PCNX4-209ENST00000555569 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
PCNX4-209ENST00000555569 STYK1Q6J9G0 422 aa18.1■□□□□ 0.49
PCNX4-209ENST00000555569 TPTE2Q6XPS3 522 aa18.1■□□□□ 0.49
PCNX4-209ENST00000555569 KIF6Q6ZMV9 814 aa18.1■□□□□ 0.49
PCNX4-209ENST00000555569 TTLL7Q6ZT98 887 aa18.1■□□□□ 0.49
PCNX4-209ENST00000555569 SLX4Q8IY92 1834 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 FAM177BA6PVY3 158 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 SRGNP10124 158 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 CNKSR1Q969H4 720 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 MASTLQ96GX5 879 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 TRIM35Q9UPQ4 493 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 FER1L6Q2WGJ9 1857 aa18.09■□□□□ 0.49
PCNX4-209ENST00000555569 EIF2S2P20042 333 aaKnown RBP18.08■□□□□ 0.48
PCNX4-209ENST00000555569 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
PCNX4-209ENST00000555569 NFKBIEO00221 500 aa18.07■□□□□ 0.48
PCNX4-209ENST00000555569 CHL1O00533 1208 aa18.07■□□□□ 0.48
PCNX4-209ENST00000555569 C21orf2O43822 256 aa18.07■□□□□ 0.48
PCNX4-209ENST00000555569 LMNB1P20700 586 aa18.07■□□□□ 0.48
PCNX4-209ENST00000555569 NMRK2Q9NPI5 230 aa18.07■□□□□ 0.48
PCNX4-209ENST00000555569 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
PCNX4-209ENST00000555569 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
PCNX4-209ENST00000555569 GTF2E1P29083 439 aaPredicted RBP18.06■□□□□ 0.48
PCNX4-209ENST00000555569 PRELPP51888 382 aa18.06■□□□□ 0.48
PCNX4-209ENST00000555569 PRPF40BQ6NWY9 871 aaKnown RBP18.06■□□□□ 0.48
PCNX4-209ENST00000555569 NYXQ9GZU5 481 aa18.06■□□□□ 0.48
PCNX4-209ENST00000555569 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
PCNX4-209ENST00000555569 LAS1LQ9Y4W2 734 aaKnown RBP18.06■□□□□ 0.48
PCNX4-209ENST00000555569 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
PCNX4-209ENST00000555569 DICER1Q9UPY3 1922 aaKnown RBP18.06■□□□□ 0.48
PCNX4-209ENST00000555569 KLRG2A4D1S0 409 aaPredicted RBP18.05■□□□□ 0.48
PCNX4-209ENST00000555569 NPR1P16066 1061 aa18.05■□□□□ 0.48
PCNX4-209ENST00000555569 PDIA6Q15084 440 aa18.05■□□□□ 0.48
PCNX4-209ENST00000555569 TNRC6CQ9HCJ0 1690 aaKnown RBP18.04■□□□□ 0.48
PCNX4-209ENST00000555569 GPTP24298 496 aa18.04■□□□□ 0.48
PCNX4-209ENST00000555569 GIGYF2Q6Y7W6 1299 aaKnown RBP18.04■□□□□ 0.48
PCNX4-209ENST00000555569 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
PCNX4-209ENST00000555569 ANXA1P04083 346 aa18.03■□□□□ 0.48
PCNX4-209ENST00000555569 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
PCNX4-209ENST00000555569 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
PCNX4-209ENST00000555569 SOGA3Q5TF21 947 aa18.03■□□□□ 0.48
PCNX4-209ENST00000555569 NECTIN2Q92692 538 aa18.03■□□□□ 0.48
PCNX4-209ENST00000555569 IBTKQ9P2D0 1353 aaPredicted RBP18.03■□□□□ 0.48
PCNX4-209ENST00000555569 UBN2Q6ZU65 1347 aa18.02■□□□□ 0.48
PCNX4-209ENST00000555569 APAF1O14727 1248 aa18.02■□□□□ 0.48
PCNX4-209ENST00000555569 TOMM70O94826 608 aa18.02■□□□□ 0.48
PCNX4-209ENST00000555569 HSPA6P17066 643 aa18.02■□□□□ 0.48
PCNX4-209ENST00000555569 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
PCNX4-209ENST00000555569 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.48
PCNX4-209ENST00000555569 ABCC12Q96J65 1359 aa18.02■□□□□ 0.47
PCNX4-209ENST00000555569 LTBP3Q9NS15 1303 aa18.01■□□□□ 0.47
PCNX4-209ENST00000555569 ERFEQ4G0M1 354 aa18.01■□□□□ 0.47
PCNX4-209ENST00000555569 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
PCNX4-209ENST00000555569 CFAP44Q96MT7 982 aa18.01■□□□□ 0.47
PCNX4-209ENST00000555569 TAOK3Q9H2K8 898 aa18.01■□□□□ 0.47
PCNX4-209ENST00000555569 ANKRD36CQ5JPF3 1778 aa18■□□□□ 0.47
PCNX4-209ENST00000555569 C16orf71Q8IYS4 520 aaPredicted RBP18■□□□□ 0.47
PCNX4-209ENST00000555569 C7orf43Q8WVR3 580 aa18■□□□□ 0.47
PCNX4-209ENST00000555569 RRAGCQ9HB90 399 aa18■□□□□ 0.47
PCNX4-209ENST00000555569 DDX21Q9NR30 783 aaKnown RBP eCLIP18■□□□□ 0.47
PCNX4-209ENST00000555569 RIC1Q4ADV7 1423 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 GLTPD2A6NH11 291 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 HOXB7P09629 217 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 CCDC93Q567U6 631 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 COPS6Q7L5N1 327 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 PPP1R42Q7Z4L9 355 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
PCNX4-209ENST00000555569 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
PCNX4-209ENST00000555569 NTSR2O95665 410 aa17.98■□□□□ 0.47
PCNX4-209ENST00000555569 ALDH1B1P30837 517 aa17.98■□□□□ 0.47
PCNX4-209ENST00000555569 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
PCNX4-209ENST00000555569 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
PCNX4-209ENST00000555569 RBM46Q8TBY0 533 aaKnown RBP17.98■□□□□ 0.47
PCNX4-209ENST00000555569 ZNF853P0CG23 659 aa17.97■□□□□ 0.47
PCNX4-209ENST00000555569 CALD1Q05682 793 aaKnown RBP17.97■□□□□ 0.47
PCNX4-209ENST00000555569 CCDC184Q52MB2 194 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms