RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 SYTL4Q96C24 671 aaPredicted RBP20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 V9GYY5 206 aaPredicted RBP20.41■□□□□ 0.86
PPP4R3A-208ENST00000555462 IFIT2P09913 472 aaKnown RBP20.4■□□□□ 0.86
PPP4R3A-208ENST00000555462 ATP2B3Q16720 1220 aa20.4■□□□□ 0.86
PPP4R3A-208ENST00000555462 KCNF1Q9H3M0 494 aa20.4■□□□□ 0.86
PPP4R3A-208ENST00000555462 SLFNL1Q499Z3 407 aa20.4■□□□□ 0.86
PPP4R3A-208ENST00000555462 RAB11FIP3O75154 756 aa20.4■□□□□ 0.86
PPP4R3A-208ENST00000555462 UBE2HP62256 183 aa20.4■□□□□ 0.86
PPP4R3A-208ENST00000555462 RAD50Q92878 1312 aa20.39■□□□□ 0.86
PPP4R3A-208ENST00000555462 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.852e-7■□□□□ 8.5
PPP4R3A-208ENST00000555462 TPCN1Q9ULQ1 816 aa20.39■□□□□ 0.85
PPP4R3A-208ENST00000555462 MTMR6Q9Y217 621 aa20.39■□□□□ 0.85
PPP4R3A-208ENST00000555462 TTC6Q86TZ1 520 aa20.39■□□□□ 0.85
PPP4R3A-208ENST00000555462 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
PPP4R3A-208ENST00000555462 RIOK3O14730 519 aaKnown RBP20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 PIBF1Q8WXW3 757 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 DACT1Q9NYF0 836 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 KIF24Q5T7B8 1368 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 A2ML1A8K2U0 1454 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 ANAPC15P60006 121 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 KIF1BPQ96EK5 621 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 BCL2L12Q9HB09 334 aa20.38■□□□□ 0.85
PPP4R3A-208ENST00000555462 ST3GAL1Q11201 340 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 MYRIPQ8NFW9 859 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 SSH3Q8TE77 659 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 ZBTB9Q96C00 473 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 TTC14Q96N46 770 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 KIF3AQ9Y496 699 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 CYP46A1Q9Y6A2 500 aa20.37■□□□□ 0.85
PPP4R3A-208ENST00000555462 TRIM5Q9C035 493 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 FTOQ9C0B1 505 aaKnown RBP eCLIP20.36■□□□□ 0.851e-7■□□□□ 8.2
PPP4R3A-208ENST00000555462 STAP2Q9UGK3 403 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 RBM8AQ9Y5S9 174 aaKnown RBP20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 JAK2O60674 1132 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 MYL6BP14649 208 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 GUCY1B3Q02153 619 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 ARID5BQ14865 1188 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 A0A0U1RQG5 324 aaPredicted RBP20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 CCDC129Q6ZRS4 1044 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 BICD2Q8TD16 824 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 MAP3K2Q9Y2U5 619 aa20.36■□□□□ 0.85
PPP4R3A-208ENST00000555462 ARHGAP31Q2M1Z3 1444 aa20.35■□□□□ 0.85
PPP4R3A-208ENST00000555462 TEFQ10587 303 aa20.35■□□□□ 0.85
PPP4R3A-208ENST00000555462 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
PPP4R3A-208ENST00000555462 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
PPP4R3A-208ENST00000555462 ANO6Q4KMQ2 910 aa20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 FSD1Q9BTV5 496 aa20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 ANKRD26Q9UPS8 1709 aa20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 DNAJC25Q9H1X3 360 aa20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 PRDM4Q9UKN5 801 aa20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 HSP90B1P14625 803 aaKnown RBP20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 MCM5P33992 734 aa20.34■□□□□ 0.85
PPP4R3A-208ENST00000555462 HOXC9P31274 260 aa20.33■□□□□ 0.85
PPP4R3A-208ENST00000555462 FGD1P98174 961 aa20.33■□□□□ 0.85
PPP4R3A-208ENST00000555462 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.84
PPP4R3A-208ENST00000555462 A0A0D9SFI3 127 aa20.33■□□□□ 0.84
PPP4R3A-208ENST00000555462 PREX1Q8TCU6 1659 aa20.33■□□□□ 0.84
PPP4R3A-208ENST00000555462 SEC62Q99442 399 aaKnown RBP20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 SLC39A6Q13433 755 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 CDC42BPGQ6DT37 1551 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 NBPF6Q5VWK0 638 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 CHST3Q7LGC8 479 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 NBPF4Q96M43 638 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 TNMDQ9H2S6 317 aa20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 TRMT1Q9NXH9 659 aaKnown RBP20.32■□□□□ 0.84
PPP4R3A-208ENST00000555462 RAB11FIP4Q86YS3 637 aa20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 NUP62CLQ9H1M0 184 aa20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 ZNF589Q86UQ0 364 aaPredicted RBP20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 DNAJC2Q99543 621 aaKnown RBP20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 DLC1Q96QB1 1528 aa20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 EAF2Q96CJ1 260 aaPredicted RBP20.31■□□□□ 0.84
PPP4R3A-208ENST00000555462 NR1I2O75469 434 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 TYRO3Q06418 890 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 SPATA32Q96LK8 384 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 TSPOAP1O95153 1857 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 BEND3Q5T5X7 828 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 ZNF530Q6P9A1 599 aaPredicted RBP20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 FILIP1Q7Z7B0 1213 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 PDCL2Q8N4E4 241 aa20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
PPP4R3A-208ENST00000555462 FAM184AQ8NB25 1140 aa20.29■□□□□ 0.84
PPP4R3A-208ENST00000555462 GLRX3O76003 335 aaKnown RBP20.29■□□□□ 0.84
PPP4R3A-208ENST00000555462 ECHDC1Q9NTX5 307 aa20.29■□□□□ 0.84
PPP4R3A-208ENST00000555462 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
PPP4R3A-208ENST00000555462 FLT4P35916 1363 aa20.28■□□□□ 0.84
PPP4R3A-208ENST00000555462 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
PPP4R3A-208ENST00000555462 MAP7D2Q96T17 732 aa20.28■□□□□ 0.84
PPP4R3A-208ENST00000555462 ATP6V1DQ9Y5K8 247 aa20.28■□□□□ 0.84
PPP4R3A-208ENST00000555462 FMNL2Q96PY5 1086 aa20.28■□□□□ 0.84
PPP4R3A-208ENST00000555462 CBX8Q9HC52 389 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms