RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 EPHA4P54764 986 aa10.37□□□□□ -0.75
SEC23A-209ENST00000555363 PSMA6P60900 246 aaKnown RBP10.37□□□□□ -0.75
SEC23A-209ENST00000555363 CLDN10P78369 228 aa10.37□□□□□ -0.75
SEC23A-209ENST00000555363 LARGE2Q8N3Y3 721 aa10.37□□□□□ -0.75
SEC23A-209ENST00000555363 EML1O00423 815 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 ALAS2P22557 587 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 ZNF468Q5VIY5 522 aaPredicted RBP10.36□□□□□ -0.75
SEC23A-209ENST00000555363 LINC00114Q6XXX2 140 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 FCHSD1Q86WN1 690 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 TSPAN10Q9H1Z9 355 aaPredicted RBP10.36□□□□□ -0.75
SEC23A-209ENST00000555363 SUV39H2Q9H5I1 410 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 STRN4Q9NRL3 753 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 HCN4Q9Y3Q4 1203 aa10.36□□□□□ -0.75
SEC23A-209ENST00000555363 GPC6Q9Y625 555 aaPredicted RBP10.36□□□□□ -0.75
SEC23A-209ENST00000555363 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
SEC23A-209ENST00000555363 COL8A1P27658 744 aa10.35□□□□□ -0.75
SEC23A-209ENST00000555363 SH3PXD2AQ5TCZ1 1133 aa10.35□□□□□ -0.75
SEC23A-209ENST00000555363 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
SEC23A-209ENST00000555363 HOMEZQ8IX15 550 aa10.34□□□□□ -0.75
SEC23A-209ENST00000555363 GLMNQ92990 594 aa10.34□□□□□ -0.75
SEC23A-209ENST00000555363 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
SEC23A-209ENST00000555363 KLF15Q9UIH9 416 aa10.34□□□□□ -0.75
SEC23A-209ENST00000555363 SFI1A8K8P3 1242 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 EFSO43281 561 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 PPP1R12BO60237 982 aaPredicted RBP10.33□□□□□ -0.76
SEC23A-209ENST00000555363 RASA1P20936 1047 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 DGKGP49619 791 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 NEUROD1Q13562 356 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 SYT9Q86SS6 491 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 TSEN2Q8NCE0 465 aaKnown RBP10.33□□□□□ -0.76
SEC23A-209ENST00000555363 HCN2Q9UL51 889 aa10.33□□□□□ -0.76
SEC23A-209ENST00000555363 ITGB2P05107 769 aa10.32□□□□□ -0.76
SEC23A-209ENST00000555363 CEP63Q96MT8 703 aa10.32□□□□□ -0.76
SEC23A-209ENST00000555363 PHACTR1Q9C0D0 580 aa10.32□□□□□ -0.76
SEC23A-209ENST00000555363 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
SEC23A-209ENST00000555363 M0R2N6 131 aa10.31□□□□□ -0.76
SEC23A-209ENST00000555363 PROCP04070 461 aa10.31□□□□□ -0.76
SEC23A-209ENST00000555363 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
SEC23A-209ENST00000555363 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
SEC23A-209ENST00000555363 LARP1Q6PKG0 1096 aaKnown RBP10.31□□□□□ -0.76
SEC23A-209ENST00000555363 CHMP7Q8WUX9 453 aaPredicted RBP10.31□□□□□ -0.76
SEC23A-209ENST00000555363 ELOA3CA0A087WX78 387 aaPredicted RBP10.3□□□□□ -0.76
SEC23A-209ENST00000555363 LOC100996750A0A140TA64 210 aa10.3□□□□□ -0.76
SEC23A-209ENST00000555363 ELOA3DA6NLF2 546 aaPredicted RBP10.3□□□□□ -0.76
SEC23A-209ENST00000555363 ELOA3BQ3SY89 546 aa10.3□□□□□ -0.76
SEC23A-209ENST00000555363 SIX5Q8N196 739 aa10.3□□□□□ -0.76
SEC23A-209ENST00000555363 ELOA3Q8NG57 546 aa10.3□□□□□ -0.76
SEC23A-209ENST00000555363 CALR3Q96L12 384 aaKnown RBP10.3□□□□□ -0.76
SEC23A-209ENST00000555363 KRTAP4-6Q9BYQ5 205 aa10.3□□□□□ -0.76
SEC23A-209ENST00000555363 SFSWAPQ12872 951 aaKnown RBP10.29□□□□□ -0.76
SEC23A-209ENST00000555363 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
SEC23A-209ENST00000555363 HINFPQ9BQA5 517 aa10.29□□□□□ -0.76
SEC23A-209ENST00000555363 BRD7Q9NPI1 651 aa10.29□□□□□ -0.76
SEC23A-209ENST00000555363 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
SEC23A-209ENST00000555363 SEC13P55735 322 aa10.28□□□□□ -0.76
SEC23A-209ENST00000555363 NGLY1Q96IV0 654 aa10.28□□□□□ -0.76
SEC23A-209ENST00000555363 ATAD2Q6PL18 1390 aa10.27□□□□□ -0.76
SEC23A-209ENST00000555363 ADAM23O75077 832 aa10.27□□□□□ -0.77
SEC23A-209ENST00000555363 SIN3BO75182 1162 aa10.27□□□□□ -0.77
SEC23A-209ENST00000555363 BAG6P46379 1132 aa10.27□□□□□ -0.77
SEC23A-209ENST00000555363 SPEM2Q0P670 501 aa10.27□□□□□ -0.77
SEC23A-209ENST00000555363 SCG3Q8WXD2 468 aaKnown RBP10.27□□□□□ -0.77
SEC23A-209ENST00000555363 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
SEC23A-209ENST00000555363 SPDYE3A6NKU9 549 aa10.26□□□□□ -0.77
SEC23A-209ENST00000555363 HIRAP54198 1017 aaPredicted RBP10.26□□□□□ -0.77
SEC23A-209ENST00000555363 HIF1AQ16665 826 aa10.26□□□□□ -0.77
SEC23A-209ENST00000555363 SUSD3Q96L08 255 aa10.26□□□□□ -0.77
SEC23A-209ENST00000555363 SLC30A3Q99726 388 aa10.26□□□□□ -0.77
SEC23A-209ENST00000555363 PLVAPQ9BX97 442 aa10.26□□□□□ -0.77
SEC23A-209ENST00000555363 KCNH4Q9UQ05 1017 aa10.26□□□□□ -0.77
SEC23A-209ENST00000555363 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
SEC23A-209ENST00000555363 K7ELQ4 463 aaPredicted RBP10.25□□□□□ -0.77
SEC23A-209ENST00000555363 RAB44Q7Z6P3 723 aaPredicted RBP10.25□□□□□ -0.77
SEC23A-209ENST00000555363 ALDH16A1Q8IZ83 802 aa10.25□□□□□ -0.77
SEC23A-209ENST00000555363 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
SEC23A-209ENST00000555363 C7orf43Q8WVR3 580 aa10.25□□□□□ -0.77
SEC23A-209ENST00000555363 TBC1D8BQ0IIM8 1120 aa10.24□□□□□ -0.77
SEC23A-209ENST00000555363 ZNF280CQ8ND82 737 aa10.24□□□□□ -0.77
SEC23A-209ENST00000555363 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
SEC23A-209ENST00000555363 PRRT3Q5FWE3 981 aa10.23□□□□□ -0.77
SEC23A-209ENST00000555363 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
SEC23A-209ENST00000555363 FURINP09958 794 aa10.22□□□□□ -0.77
SEC23A-209ENST00000555363 TYRO3Q06418 890 aa10.22□□□□□ -0.77
SEC23A-209ENST00000555363 CD163Q86VB7 1156 aa10.22□□□□□ -0.77
SEC23A-209ENST00000555363 BHMTQ93088 406 aa10.22□□□□□ -0.77
SEC23A-209ENST00000555363 TRIM11Q96F44 468 aa10.22□□□□□ -0.77
SEC23A-209ENST00000555363 ADARB2-AS1A8MUL3 147 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 M0R082 166 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 C21orf2O43822 256 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 LGR5O75473 907 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 SPATA31C1P0DKV0 1188 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 LMOD1P29536 600 aaPredicted RBP10.21□□□□□ -0.77
SEC23A-209ENST00000555363 ADH7P40394 386 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 DPYDQ12882 1025 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 ZNF417Q8TAU3 575 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 TNFRSF25Q93038 417 aa10.21□□□□□ -0.77
SEC23A-209ENST00000555363 ZNF587Q96SQ5 575 aaPredicted RBP10.21□□□□□ -0.77
SEC23A-209ENST00000555363 C2orf49Q9BVC5 232 aaPredicted RBP10.21□□□□□ -0.77
SEC23A-209ENST00000555363 IGFLR1Q9H665 355 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms