RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 A0A1B0GTH6 734 aa9.23□□□□□ -0.93
CKS1BP1-201ENST00000555221 ANKRD33BA6NCL7 494 aa9.23□□□□□ -0.93
CKS1BP1-201ENST00000555221 RANGAP1P46060 587 aaPredicted RBP9.23□□□□□ -0.93
CKS1BP1-201ENST00000555221 ASB16Q96NS5 453 aa9.23□□□□□ -0.93
CKS1BP1-201ENST00000555221 CITED4Q96RK1 184 aa9.23□□□□□ -0.93
CKS1BP1-201ENST00000555221 TIMMDC1Q9NPL8 285 aa9.23□□□□□ -0.93
CKS1BP1-201ENST00000555221 ZFP42Q96MM3 310 aa9.22□□□□□ -0.93
CKS1BP1-201ENST00000555221 RBCK1Q9BYM8 510 aa9.22□□□□□ -0.93
CKS1BP1-201ENST00000555221 ANKIB1Q9P2G1 1089 aa9.22□□□□□ -0.93
CKS1BP1-201ENST00000555221 BICDL1Q6ZP65 573 aa9.21□□□□□ -0.94
CKS1BP1-201ENST00000555221 ETFBKMTQ8IXQ9 262 aa9.21□□□□□ -0.94
CKS1BP1-201ENST00000555221 RGL4Q8IZJ4 473 aa9.21□□□□□ -0.94
CKS1BP1-201ENST00000555221 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 FZD6O60353 706 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 RHOQP17081 205 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 IER5Q5VY09 327 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 C7orf43Q8WVR3 580 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 NEUROD4Q9HD90 331 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 FAM13BQ9NYF5 915 aa9.2□□□□□ -0.94
CKS1BP1-201ENST00000555221 TGFBR3LH3BV60 316 aa9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 ZBTB39O15060 712 aa9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 PCSK2P16519 638 aa9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 ATP4AP20648 1035 aa9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 ZAP70P43403 619 aa9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 NPAS4Q8IUM7 802 aa9.19□□□□□ -0.94
CKS1BP1-201ENST00000555221 MSX1P28360 303 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 MZF1P28698 734 aaPredicted RBP9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 USP5P45974 858 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 PDE3BQ13370 1112 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 COL19A1Q14993 1142 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 TREML1Q86YW5 311 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 SUSD3Q96L08 255 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 DMRTB1Q96MA1 342 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 CCDC87Q9NVE4 849 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 DYRK1BQ9Y463 629 aa9.18□□□□□ -0.94
CKS1BP1-201ENST00000555221 RBM47A0AV96 593 aaKnown RBP9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 MICAL2O94851 1124 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 RBM25P49756 843 aaKnown RBP9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 FAM26DQ5JW98 314 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 TMC7Q7Z402 723 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 ATCAYQ86WG3 371 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 ZIC5Q96T25 663 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 BCL2L13Q9BXK5 485 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 AAASQ9NRG9 546 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 BCS1LQ9Y276 419 aa9.17□□□□□ -0.94
CKS1BP1-201ENST00000555221 MAN1A2O60476 641 aa9.16□□□□□ -0.94
CKS1BP1-201ENST00000555221 RPLP1P05386 114 aaKnown RBP9.16□□□□□ -0.94
CKS1BP1-201ENST00000555221 PGBD3Q8N328 593 aa9.16□□□□□ -0.94
CKS1BP1-201ENST00000555221 GJA3Q9Y6H8 435 aa9.16□□□□□ -0.94
CKS1BP1-201ENST00000555221 F11P03951 625 aa9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 DNM1Q05193 864 aaKnown RBP9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 TTC16Q8NEE8 873 aa9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 EDEM1Q92611 657 aa9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 HSH2DQ96JZ2 352 aa9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 POLIQ9UNA4 740 aa9.15□□□□□ -0.94
CKS1BP1-201ENST00000555221 A0A1W2PNR3 127 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 ST8SIA5O15466 376 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 PDGFAP04085 211 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 LRRC69Q6ZNQ3 347 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 ZNF280CQ8ND82 737 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 PIK3R5Q8WYR1 880 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 FAM129BQ96TA1 746 aa9.14□□□□□ -0.95
CKS1BP1-201ENST00000555221 TREHO43280 583 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 IDH3AP50213 366 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 ARSDP51689 593 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 EHHADHQ08426 723 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 BTLAQ7Z6A9 289 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 GJD3Q8N144 294 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 GPR152Q8TDT2 470 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 SENP2Q9HC62 589 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 GPAMQ9HCL2 828 aa9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 DMGDHQ9UI17 866 aaKnown RBP9.13□□□□□ -0.95
CKS1BP1-201ENST00000555221 LBRQ14739 615 aaKnown RBP9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 EFHC2Q5JST6 749 aa9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 NLRP8Q86W28 1048 aa9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 GIPC2Q8TF65 315 aa9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 ZNF428Q96B54 188 aa9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 GAS2L1Q99501 681 aaPredicted RBP9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 IRX2Q9BZI1 471 aaPredicted RBP9.12□□□□□ -0.95
CKS1BP1-201ENST00000555221 E9PSI1 815 aa9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 EPB42P16452 691 aa9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 FGD1P98174 961 aa9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 EAPPQ56P03 285 aaPredicted RBP9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 ALKBH8Q96BT7 664 aaKnown RBP9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 NUDT16Q96DE0 195 aaKnown RBP9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 BCL11AQ9H165 835 aa9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
CKS1BP1-201ENST00000555221 OPLAHO14841 1288 aa9.1□□□□□ -0.95
CKS1BP1-201ENST00000555221 ZNF16P17020 682 aaPredicted RBP9.1□□□□□ -0.95
CKS1BP1-201ENST00000555221 INPP5BP32019 993 aa9.1□□□□□ -0.95
CKS1BP1-201ENST00000555221 FMR1Q06787 632 aaKnown RBP eCLIP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms