RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
VRK1-203ENST00000555067 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
VRK1-203ENST00000555067 BICDL1Q6ZP65 573 aa11.28□□□□□ -0.6
VRK1-203ENST00000555067 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
VRK1-203ENST00000555067 C7orf43Q8WVR3 580 aa11.28□□□□□ -0.6
VRK1-203ENST00000555067 KRTAP4-12Q9BQ66 201 aa11.28□□□□□ -0.6
VRK1-203ENST00000555067 PARP3Q9Y6F1 533 aa11.28□□□□□ -0.6
VRK1-203ENST00000555067 M0R082 166 aa11.27□□□□□ -0.61
VRK1-203ENST00000555067 EML1O00423 815 aa11.27□□□□□ -0.61
VRK1-203ENST00000555067 RAD21O60216 631 aa11.27□□□□□ -0.61
VRK1-203ENST00000555067 ZNF417Q8TAU3 575 aa11.27□□□□□ -0.61
VRK1-203ENST00000555067 ZNF587Q96SQ5 575 aaPredicted RBP11.27□□□□□ -0.61
VRK1-203ENST00000555067 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
VRK1-203ENST00000555067 NACC1Q96RE7 527 aa11.26□□□□□ -0.61
VRK1-203ENST00000555067 ZFP64Q9NPA5 681 aa11.26□□□□□ -0.61
VRK1-203ENST00000555067 SCHIP1Q9P0W5 487 aaPredicted RBP11.26□□□□□ -0.61
VRK1-203ENST00000555067 FAM229AH3BQW9 127 aa11.25□□□□□ -0.61
VRK1-203ENST00000555067 ALBP02768 609 aa11.25□□□□□ -0.61
VRK1-203ENST00000555067 NID1P14543 1247 aa11.25□□□□□ -0.61
VRK1-203ENST00000555067 PRSS36Q5K4E3 855 aa11.25□□□□□ -0.61
VRK1-203ENST00000555067 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
VRK1-203ENST00000555067 TEAD4Q15561 434 aa11.24□□□□□ -0.61
VRK1-203ENST00000555067 L3MBTL2Q969R5 705 aa11.24□□□□□ -0.61
VRK1-203ENST00000555067 SLC30A3Q99726 388 aa11.24□□□□□ -0.61
VRK1-203ENST00000555067 BACH1O14867 736 aa11.23□□□□□ -0.61
VRK1-203ENST00000555067 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
VRK1-203ENST00000555067 SFSWAPQ12872 951 aaKnown RBP11.23□□□□□ -0.61
VRK1-203ENST00000555067 LRRC69Q6ZNQ3 347 aa11.23□□□□□ -0.61
VRK1-203ENST00000555067 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
VRK1-203ENST00000555067 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
VRK1-203ENST00000555067 ALG2Q9H553 416 aa11.23□□□□□ -0.61
VRK1-203ENST00000555067 EPHA4P54764 986 aa11.22□□□□□ -0.61
VRK1-203ENST00000555067 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
VRK1-203ENST00000555067 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
VRK1-203ENST00000555067 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
VRK1-203ENST00000555067 NOS2P35228 1153 aa11.21□□□□□ -0.61
VRK1-203ENST00000555067 GRIK4Q16099 956 aa11.21□□□□□ -0.61
VRK1-203ENST00000555067 EML3Q32P44 896 aa11.21□□□□□ -0.61
VRK1-203ENST00000555067 C20orf204Q6ZNR8 217 aa11.21□□□□□ -0.61
VRK1-203ENST00000555067 PIK3CDO00329 1044 aa11.2□□□□□ -0.62
VRK1-203ENST00000555067 H2AFB1P0C5Y9 115 aa11.19□□□□□ -0.62
VRK1-203ENST00000555067 H2AFB2P0C5Z0 115 aa11.19□□□□□ -0.62
VRK1-203ENST00000555067 SKIP12755 728 aa11.19□□□□□ -0.62
VRK1-203ENST00000555067 ADH7P40394 386 aa11.19□□□□□ -0.62
VRK1-203ENST00000555067 LCE3BQ5TA77 95 aa11.19□□□□□ -0.62
VRK1-203ENST00000555067 ZNF358Q9NW07 568 aa11.19□□□□□ -0.62
VRK1-203ENST00000555067 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
VRK1-203ENST00000555067 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
VRK1-203ENST00000555067 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.18□□□□□ -0.62
VRK1-203ENST00000555067 C9orf172C9J069 976 aa11.17□□□□□ -0.62
VRK1-203ENST00000555067 SPEM2Q0P670 501 aa11.17□□□□□ -0.62
VRK1-203ENST00000555067 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
VRK1-203ENST00000555067 GTF2IP78347 998 aa11.16□□□□□ -0.62
VRK1-203ENST00000555067 SLC9A9Q8IVB4 645 aa11.16□□□□□ -0.62
VRK1-203ENST00000555067 SELPP16109 830 aa11.15□□□□□ -0.62
VRK1-203ENST00000555067 KCNQ4P56696 695 aa11.15□□□□□ -0.62
VRK1-203ENST00000555067 MBTPS1Q14703 1052 aa11.15□□□□□ -0.62
VRK1-203ENST00000555067 NCOA4Q13772 614 aa11.14□□□□□ -0.63
VRK1-203ENST00000555067 LRP8Q14114 963 aa11.14□□□□□ -0.63
VRK1-203ENST00000555067 SH3PXD2AQ5TCZ1 1133 aa11.14□□□□□ -0.63
VRK1-203ENST00000555067 NEUROD4Q9HD90 331 aa11.14□□□□□ -0.63
VRK1-203ENST00000555067 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
VRK1-203ENST00000555067 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
VRK1-203ENST00000555067 NBPF11Q86T75 865 aa11.13□□□□□ -0.63
VRK1-203ENST00000555067 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
VRK1-203ENST00000555067 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
VRK1-203ENST00000555067 RAB44Q7Z6P3 723 aaPredicted RBP11.12□□□□□ -0.63
VRK1-203ENST00000555067 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
VRK1-203ENST00000555067 A0A0A0MRY4 1105 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 SERTM1A2A2V5 107 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 POM121CA8CG34 1229 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 PSME1Q06323 249 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 TRAPPC3LQ5T215 181 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 TXNRD3Q86VQ6 643 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 LENG1Q96BZ8 264 aaPredicted RBP11.11□□□□□ -0.63
VRK1-203ENST00000555067 ZNF232Q9UNY5 417 aa11.11□□□□□ -0.63
VRK1-203ENST00000555067 LILRB5O75023 590 aa11.1□□□□□ -0.63
VRK1-203ENST00000555067 ELNP15502 786 aa11.1□□□□□ -0.63
VRK1-203ENST00000555067 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
VRK1-203ENST00000555067 ILDR2Q71H61 639 aa11.1□□□□□ -0.63
VRK1-203ENST00000555067 HIRAP54198 1017 aaPredicted RBP11.09□□□□□ -0.63
VRK1-203ENST00000555067 TRIM50Q86XT4 487 aa11.09□□□□□ -0.63
VRK1-203ENST00000555067 PLEKHM2Q8IWE5 1019 aa11.09□□□□□ -0.63
VRK1-203ENST00000555067 ADAMTS19Q8TE59 1207 aa11.09□□□□□ -0.63
VRK1-203ENST00000555067 TYRO3Q06418 890 aa11.08□□□□□ -0.64
VRK1-203ENST00000555067 DEPDC4Q8N2C3 294 aa11.08□□□□□ -0.64
VRK1-203ENST00000555067 SSBP4Q9BWG4 385 aaPredicted RBP11.08□□□□□ -0.64
VRK1-203ENST00000555067 KCNH4Q9UQ05 1017 aa11.08□□□□□ -0.64
VRK1-203ENST00000555067 HYAL3O43820 417 aaPredicted RBP11.07□□□□□ -0.64
VRK1-203ENST00000555067 NRG1Q02297 640 aaPredicted RBP11.07□□□□□ -0.64
VRK1-203ENST00000555067 HDGFL1Q5TGJ6 251 aa11.07□□□□□ -0.64
VRK1-203ENST00000555067 HSH2DQ96JZ2 352 aa11.07□□□□□ -0.64
VRK1-203ENST00000555067 CEP63Q96MT8 703 aa11.07□□□□□ -0.64
VRK1-203ENST00000555067 ANKIB1Q9P2G1 1089 aa11.07□□□□□ -0.64
VRK1-203ENST00000555067 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
VRK1-203ENST00000555067 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
VRK1-203ENST00000555067 ATP1A2P50993 1020 aa11.06□□□□□ -0.64
VRK1-203ENST00000555067 PSMA6P60900 246 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms