RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FSD1Q9BTV5 496 aa20.04■□□□□ 0.8
PCNX1-209ENST00000554879 RGPD8O14715 1765 aaPredicted RBP20.03■□□□□ 0.8
PCNX1-209ENST00000554879 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
PCNX1-209ENST00000554879 PLEKHM2Q8IWE5 1019 aa20.03■□□□□ 0.8
PCNX1-209ENST00000554879 TTC22Q5TAA0 569 aa20.03■□□□□ 0.8
PCNX1-209ENST00000554879 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
PCNX1-209ENST00000554879 ALDH1L1O75891 902 aa20.03■□□□□ 0.8
PCNX1-209ENST00000554879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.03■□□□□ 0.83e-7■■■■□ 20.2
PCNX1-209ENST00000554879 SDSP20132 328 aa20.02■□□□□ 0.8
PCNX1-209ENST00000554879 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
PCNX1-209ENST00000554879 VGLL3A8MV65 326 aa20.02■□□□□ 0.79
PCNX1-209ENST00000554879 CCDC57Q2TAC2 916 aa20.02■□□□□ 0.79
PCNX1-209ENST00000554879 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.79
PCNX1-209ENST00000554879 PDE1AP54750 535 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 DNAJC10Q8IXB1 793 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 RAB11FIP3O75154 756 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 CLCN1P35523 988 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 CWC27Q6UX04 472 aaKnown RBP20.01■□□□□ 0.79
PCNX1-209ENST00000554879 TBC1D2BQ9UPU7 963 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 GOLGA6L22H0YM25 854 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 FAM98CQ17RN3 349 aaKnown RBP20.01■□□□□ 0.79
PCNX1-209ENST00000554879 RUFY2Q8WXA3 655 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 BOLA2Q9H3K6 86 aa20.01■□□□□ 0.79
PCNX1-209ENST00000554879 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
PCNX1-209ENST00000554879 CWC25Q9NXE8 425 aaPredicted RBP20■□□□□ 0.79
PCNX1-209ENST00000554879 ASAP1Q9ULH1 1129 aa20■□□□□ 0.79
PCNX1-209ENST00000554879 SETD1AO15047 1707 aaKnown RBP20■□□□□ 0.79
PCNX1-209ENST00000554879 LMBR1LQ6UX01 489 aa19.99■□□□□ 0.79
PCNX1-209ENST00000554879 ADAMTSL3P82987 1691 aa19.99■□□□□ 0.79
PCNX1-209ENST00000554879 BEND3Q5T5X7 828 aa19.98■□□□□ 0.79
PCNX1-209ENST00000554879 CNNM1Q9NRU3 951 aa19.98■□□□□ 0.79
PCNX1-209ENST00000554879 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
PCNX1-209ENST00000554879 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
PCNX1-209ENST00000554879 TBC1D32Q96NH3 1257 aa19.97■□□□□ 0.79
PCNX1-209ENST00000554879 XRCC6P12956 609 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCNX1-209ENST00000554879 NEK4P51957 841 aa19.97■□□□□ 0.79
PCNX1-209ENST00000554879 MON2Q7Z3U7 1717 aa19.97■□□□□ 0.79
PCNX1-209ENST00000554879 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
PCNX1-209ENST00000554879 ERVV-2B6SEH9 535 aa19.96■□□□□ 0.79
PCNX1-209ENST00000554879 TTLL7Q6ZT98 887 aa19.96■□□□□ 0.79
PCNX1-209ENST00000554879 MRE11P49959 708 aa19.96■□□□□ 0.79
PCNX1-209ENST00000554879 SUCLG2Q96I99 432 aa19.96■□□□□ 0.79
PCNX1-209ENST00000554879 ANKRD26Q9UPS8 1709 aa19.96■□□□□ 0.79
PCNX1-209ENST00000554879 ZNF771Q7L3S4 317 aaPredicted RBP19.96■□□□□ 0.79
PCNX1-209ENST00000554879 FOXD4L6Q3SYB3 417 aaPredicted RBP19.96■□□□□ 0.79
PCNX1-209ENST00000554879 FOXD4L3Q6VB84 417 aaPredicted RBP19.96■□□□□ 0.79
PCNX1-209ENST00000554879 METTL22Q9BUU2 404 aaPredicted RBP19.96■□□□□ 0.79
PCNX1-209ENST00000554879 CEP126Q9P2H0 1117 aa19.95■□□□□ 0.78
PCNX1-209ENST00000554879 SOS2Q07890 1332 aaPredicted RBP19.95■□□□□ 0.78
PCNX1-209ENST00000554879 PLCB2Q00722 1185 aa19.94■□□□□ 0.78
PCNX1-209ENST00000554879 GLRX3O76003 335 aaKnown RBP19.94■□□□□ 0.78
PCNX1-209ENST00000554879 NRKQ7Z2Y5 1582 aa19.94■□□□□ 0.78
PCNX1-209ENST00000554879 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
PCNX1-209ENST00000554879 TRAK2O60296 914 aa19.93■□□□□ 0.78
PCNX1-209ENST00000554879 GCKRQ14397 625 aa19.93■□□□□ 0.78
PCNX1-209ENST00000554879 TBC1D2Q9BYX2 928 aa19.93■□□□□ 0.78
PCNX1-209ENST00000554879 FKBP4Q02790 459 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCNX1-209ENST00000554879 PLBD2Q8NHP8 589 aa19.92■□□□□ 0.78
PCNX1-209ENST00000554879 FAM89AQ96GI7 184 aa19.92■□□□□ 0.78
PCNX1-209ENST00000554879 ECHDC1Q9NTX5 307 aa19.92■□□□□ 0.78
PCNX1-209ENST00000554879 ZKSCAN1P17029 563 aaPredicted RBP19.92■□□□□ 0.78
PCNX1-209ENST00000554879 WASHC4Q2M389 1173 aa19.92■□□□□ 0.78
PCNX1-209ENST00000554879 FAM182BQ5T319 152 aa19.92■□□□□ 0.78
PCNX1-209ENST00000554879 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.92■□□□□ 0.78
PCNX1-209ENST00000554879 NEURL1BA8MQ27 555 aa19.91■□□□□ 0.78
PCNX1-209ENST00000554879 MAP7D2Q96T17 732 aa19.91■□□□□ 0.78
PCNX1-209ENST00000554879 FMN2Q9NZ56 1722 aa19.91■□□□□ 0.78
PCNX1-209ENST00000554879 DCCP43146 1447 aa19.9■□□□□ 0.78
PCNX1-209ENST00000554879 PIK3C2AO00443 1686 aa19.9■□□□□ 0.78
PCNX1-209ENST00000554879 UPF3BQ9BZI7 483 aaKnown RBP19.9■□□□□ 0.78
PCNX1-209ENST00000554879 TNNT3P45378 269 aaPredicted RBP19.9■□□□□ 0.78
PCNX1-209ENST00000554879 IFIT5Q13325 482 aaKnown RBP19.9■□□□□ 0.78
PCNX1-209ENST00000554879 AKAP12Q02952 1782 aa19.9■□□□□ 0.78
PCNX1-209ENST00000554879 PIGBQ92521 554 aa19.9■□□□□ 0.78
PCNX1-209ENST00000554879 DZIP3Q86Y13 1208 aaKnown RBP19.89■□□□□ 0.78
PCNX1-209ENST00000554879 HSP90B1P14625 803 aaKnown RBP19.89■□□□□ 0.77
PCNX1-209ENST00000554879 MPHOSPH8Q99549 860 aa19.89■□□□□ 0.77
PCNX1-209ENST00000554879 NALCNQ8IZF0 1738 aa19.89■□□□□ 0.77
PCNX1-209ENST00000554879 GSPT1P15170 499 aaKnown RBP19.89■□□□□ 0.77
PCNX1-209ENST00000554879 RABEP1Q15276 862 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 METTL24Q5JXM2 366 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 GRPEL1Q9HAV7 217 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 CEMIPQ8WUJ3 1361 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 CHMP5Q9NZZ3 219 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 UQCRHLA0A096LP55 91 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 UQCRHP07919 91 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 CBX1P83916 185 aa19.88■□□□□ 0.77
PCNX1-209ENST00000554879 CHD2O14647 1828 aaKnown RBP19.87■□□□□ 0.77
PCNX1-209ENST00000554879 APPP05067 770 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 TTC39AQ5SRH9 613 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 GBP4Q96PP9 640 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 PXDNQ92626 1479 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 SSH3Q8TE77 659 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 NCOA3Q9Y6Q9 1424 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 KCNQ4P56696 695 aa19.87■□□□□ 0.77
PCNX1-209ENST00000554879 CCDC158Q5M9N0 1113 aa19.86■□□□□ 0.77
PCNX1-209ENST00000554879 VPS37DQ86XT2 251 aa19.86■□□□□ 0.77
PCNX1-209ENST00000554879 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
PCNX1-209ENST00000554879 USP21Q9UK80 565 aa19.86■□□□□ 0.77
PCNX1-209ENST00000554879 LDHAL6AQ6ZMR3 332 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms