RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CASTP20810 708 aaKnown RBP17.58■□□□□ 0.4
ACTN1-211ENST00000553882 MTX1Q13505 466 aa17.58■□□□□ 0.4
ACTN1-211ENST00000553882 LRSAM1Q6UWE0 723 aa17.58■□□□□ 0.4
ACTN1-211ENST00000553882 AACSQ86V21 672 aa17.58■□□□□ 0.4
ACTN1-211ENST00000553882 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
ACTN1-211ENST00000553882 ECHDC1Q9NTX5 307 aa17.58■□□□□ 0.4
ACTN1-211ENST00000553882 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
ACTN1-211ENST00000553882 PTH1RQ03431 593 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 ALDH1L1O75891 902 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 RUFY3Q7L099 469 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 SUCLG2Q96I99 432 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 TTC14Q96N46 770 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 SIL1Q9H173 461 aa17.57■□□□□ 0.4
ACTN1-211ENST00000553882 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
ACTN1-211ENST00000553882 BICC1Q9H694 974 aaKnown RBP17.56■□□□□ 0.4
ACTN1-211ENST00000553882 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
ACTN1-211ENST00000553882 GRM8O00222 908 aa17.56■□□□□ 0.4
ACTN1-211ENST00000553882 PRPF40BQ6NWY9 871 aaKnown RBP17.56■□□□□ 0.4
ACTN1-211ENST00000553882 MYL6BP14649 208 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 ADCK5Q3MIX3 580 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 USP48Q86UV5 1035 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 KLHDC4Q8TBB5 520 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 KAZALD1Q96I82 304 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 TCHHQ07283 1943 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 RPAP1Q9BWH6 1393 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-211ENST00000553882 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
ACTN1-211ENST00000553882 LARGE1O95461 756 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 ZSCAN30Q86W11 494 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
ACTN1-211ENST00000553882 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
ACTN1-211ENST00000553882 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
ACTN1-211ENST00000553882 LINS1Q8NG48 757 aa17.54■□□□□ 0.4
ACTN1-211ENST00000553882 GPATCH3Q96I76 525 aa17.54■□□□□ 0.4
ACTN1-211ENST00000553882 JAKMIP1Q96N16 626 aaKnown RBP17.54■□□□□ 0.4
ACTN1-211ENST00000553882 LIMCH1Q9UPQ0 1083 aa17.54■□□□□ 0.4
ACTN1-211ENST00000553882 NCAPD2Q15021 1401 aa17.54■□□□□ 0.4
ACTN1-211ENST00000553882 SASH1O94885 1247 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 RUFY2Q8WXA3 655 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-211ENST00000553882 TLR7Q9NYK1 1049 aaKnown RBP17.53■□□□□ 0.4
ACTN1-211ENST00000553882 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 MSNP26038 577 aaKnown RBP17.53■□□□□ 0.4
ACTN1-211ENST00000553882 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
ACTN1-211ENST00000553882 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 ERC1Q8IUD2 1116 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 FAM227BQ96M60 508 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
ACTN1-211ENST00000553882 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
ACTN1-211ENST00000553882 PDIA6Q15084 440 aa17.52■□□□□ 0.4
ACTN1-211ENST00000553882 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
ACTN1-211ENST00000553882 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
ACTN1-211ENST00000553882 PHRF1Q9P1Y6 1649 aaKnown RBP17.52■□□□□ 0.4
ACTN1-211ENST00000553882 SYT1P21579 422 aa17.52■□□□□ 0.4
ACTN1-211ENST00000553882 G3BP1Q13283 466 aaKnown RBP eCLIP17.52■□□□□ 0.47e-7■□□□□ 10.7
ACTN1-211ENST00000553882 CCDC83Q8IWF9 413 aa17.52■□□□□ 0.4
ACTN1-211ENST00000553882 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
ACTN1-211ENST00000553882 ERBB3P21860 1342 aa17.52■□□□□ 0.39
ACTN1-211ENST00000553882 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 ZNF790Q6PG37 636 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 STX6O43752 255 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 KCNJ4P48050 445 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 DDX17Q92841 729 aaKnown RBP17.51■□□□□ 0.39
ACTN1-211ENST00000553882 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 PDLIM2Q96JY6 352 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
ACTN1-211ENST00000553882 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
ACTN1-211ENST00000553882 ZSCAN22P10073 491 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-211ENST00000553882 COL9A3Q14050 684 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-211ENST00000553882 PROSER2Q86WR7 435 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-211ENST00000553882 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
ACTN1-211ENST00000553882 SLIT3O75094 1523 aa17.5■□□□□ 0.39
ACTN1-211ENST00000553882 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
ACTN1-211ENST00000553882 NPHP4O75161 1426 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-211ENST00000553882 CRYBG1Q9Y4K1 1723 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 FIBPO43427 364 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
ACTN1-211ENST00000553882 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 RGPD5Q99666 1765 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 COPS6Q7L5N1 327 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
ACTN1-211ENST00000553882 CYP46A1Q9Y6A2 500 aa17.49■□□□□ 0.39
ACTN1-211ENST00000553882 OVOS2A0A0G2JMS6 1433 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 GJB2P29033 226 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 NECAB1Q8N987 351 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 MYD88Q99836 296 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 TCEANC2Q96MN5 208 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 FSD1Q9BTV5 496 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 NPHP3Q7Z494 1330 aa17.48■□□□□ 0.39
ACTN1-211ENST00000553882 A0A0D9SFI3 127 aa17.47■□□□□ 0.39
ACTN1-211ENST00000553882 ZKSCAN1P17029 563 aaPredicted RBP17.47■□□□□ 0.39
ACTN1-211ENST00000553882 NEXNQ0ZGT2 675 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms